RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 ARHGAP5-AS1Q96IT6 56 aa10.89□□□□□ -0.67
COL12A1-202ENST00000345356 C4orf45Q96LM5 186 aa10.89□□□□□ -0.67
COL12A1-202ENST00000345356 TMED3Q9Y3Q3 217 aa10.89□□□□□ -0.67
COL12A1-202ENST00000345356 DEGS1O15121 323 aa10.89□□□□□ -0.67
COL12A1-202ENST00000345356 SOX15O60248 233 aa10.89□□□□□ -0.67
COL12A1-202ENST00000345356 ABHD16AO95870 558 aa10.89□□□□□ -0.67
COL12A1-202ENST00000345356 OLFM2O95897 454 aa10.89□□□□□ -0.67
COL12A1-202ENST00000345356 HPP00738 406 aa10.89□□□□□ -0.67
COL12A1-202ENST00000345356 ANKRD34CP0C6C1 535 aa10.89□□□□□ -0.67
COL12A1-202ENST00000345356 CT45A6P0DMU7 189 aa10.89□□□□□ -0.67
COL12A1-202ENST00000345356 CT45A5P0DMU8 189 aa10.89□□□□□ -0.67
COL12A1-202ENST00000345356 CT45A7P0DMV0 189 aa10.89□□□□□ -0.67
COL12A1-202ENST00000345356 CT45A8P0DMV1 189 aa10.89□□□□□ -0.67
COL12A1-202ENST00000345356 CT45A9P0DMV2 189 aa10.89□□□□□ -0.67
COL12A1-202ENST00000345356 HIST1H1DP16402 221 aaKnown RBP10.89□□□□□ -0.67
COL12A1-202ENST00000345356 CT45A2Q5DJT8 189 aa10.89□□□□□ -0.67
COL12A1-202ENST00000345356 CT45A1Q5HYN5 189 aa10.89□□□□□ -0.67
COL12A1-202ENST00000345356 CT45A3Q8NHU0 189 aa10.89□□□□□ -0.67
COL12A1-202ENST00000345356 TXNIPQ9H3M7 391 aa10.89□□□□□ -0.67
COL12A1-202ENST00000345356 UBR2Q8IWV8 1755 aa10.89□□□□□ -0.67
COL12A1-202ENST00000345356 LINC00587B1AMM8 73 aa10.88□□□□□ -0.67
COL12A1-202ENST00000345356 MASP2O00187 686 aa10.88□□□□□ -0.67
COL12A1-202ENST00000345356 OR7C2O60412 319 aa10.88□□□□□ -0.67
COL12A1-202ENST00000345356 TBXA2RP21731 343 aa10.88□□□□□ -0.67
COL12A1-202ENST00000345356 SYT13Q7L8C5 426 aa10.88□□□□□ -0.67
COL12A1-202ENST00000345356 IER2Q9BTL4 223 aa10.88□□□□□ -0.67
COL12A1-202ENST00000345356 CHST6Q9GZX3 395 aa10.88□□□□□ -0.67
COL12A1-202ENST00000345356 NAT8Q9UHE5 227 aa10.88□□□□□ -0.67
COL12A1-202ENST00000345356 MRPL33O75394 65 aaKnown RBP10.88□□□□□ -0.67
COL12A1-202ENST00000345356 TCN2P20062 427 aa10.88□□□□□ -0.67
COL12A1-202ENST00000345356 NHLH2Q02577 135 aa10.88□□□□□ -0.67
COL12A1-202ENST00000345356 IL13RA2Q14627 380 aa10.88□□□□□ -0.67
COL12A1-202ENST00000345356 PRR27Q6MZM9 219 aa10.88□□□□□ -0.67
COL12A1-202ENST00000345356 OR10C1Q96KK4 312 aa10.88□□□□□ -0.67
COL12A1-202ENST00000345356 TLNRD1Q9H1K6 362 aa10.88□□□□□ -0.67
COL12A1-202ENST00000345356 DNMT3BQ9UBC3 853 aaKnown RBP10.88□□□□□ -0.67
COL12A1-202ENST00000345356 CDC42EP2O14613 210 aa10.88□□□□□ -0.67
COL12A1-202ENST00000345356 CLN3Q13286 438 aa10.88□□□□□ -0.67
COL12A1-202ENST00000345356 PRAMEF20Q5VT98 475 aa10.88□□□□□ -0.67
COL12A1-202ENST00000345356 CLEC18BQ6UXF7 455 aa10.88□□□□□ -0.67
COL12A1-202ENST00000345356 RNF24Q9Y225 148 aa10.88□□□□□ -0.67
COL12A1-202ENST00000345356 NRXN3Q9Y4C0 1643 aa10.88□□□□□ -0.67
COL12A1-202ENST00000345356 NUP98P52948 1817 aa10.88□□□□□ -0.67
COL12A1-202ENST00000345356 TNFRSF10CO14798 259 aa10.88□□□□□ -0.67
COL12A1-202ENST00000345356 CRISP2P16562 243 aa10.88□□□□□ -0.67
COL12A1-202ENST00000345356 BTG2P78543 158 aa10.88□□□□□ -0.67
COL12A1-202ENST00000345356 B4GALNT1Q00973 533 aa10.88□□□□□ -0.67
COL12A1-202ENST00000345356 TGFBR3Q03167 851 aa10.88□□□□□ -0.67
COL12A1-202ENST00000345356 STUMQ69YW2 141 aa10.88□□□□□ -0.67
COL12A1-202ENST00000345356 THSD4Q6ZMP0 1018 aa10.88□□□□□ -0.67
COL12A1-202ENST00000345356 ESRP2Q9H6T0 727 aaKnown RBP10.88□□□□□ -0.67
COL12A1-202ENST00000345356 LIN7CQ9NUP9 197 aaKnown RBP10.88□□□□□ -0.67
COL12A1-202ENST00000345356 FBXO34Q9NWN3 711 aa10.88□□□□□ -0.67
COL12A1-202ENST00000345356 TIMP1P01033 207 aa10.87□□□□□ -0.67
COL12A1-202ENST00000345356 FGF2P09038 288 aa10.87□□□□□ -0.67
COL12A1-202ENST00000345356 CEBPBP17676 345 aa10.87□□□□□ -0.67
COL12A1-202ENST00000345356 SLC25A42Q86VD7 318 aa10.87□□□□□ -0.67
COL12A1-202ENST00000345356 ERGIC1Q969X5 290 aa10.87□□□□□ -0.67
COL12A1-202ENST00000345356 SPOCK3Q9BQ16 436 aa10.87□□□□□ -0.67
COL12A1-202ENST00000345356 PISDQ9UG56 409 aa10.87□□□□□ -0.67
COL12A1-202ENST00000345356 MCTS1Q9ULC4 181 aaKnown RBP10.87□□□□□ -0.67
COL12A1-202ENST00000345356 KCNAB3O43448 404 aa10.87□□□□□ -0.67
COL12A1-202ENST00000345356 TAS2R45P59539 299 aa10.87□□□□□ -0.67
COL12A1-202ENST00000345356 ZNF468Q5VIY5 522 aaPredicted RBP10.87□□□□□ -0.67
COL12A1-202ENST00000345356 C11orf42Q8N5U0 333 aa10.87□□□□□ -0.67
COL12A1-202ENST00000345356 ZNRF4Q8WWF5 429 aa10.87□□□□□ -0.67
COL12A1-202ENST00000345356 TBX15Q96SF7 602 aa10.87□□□□□ -0.67
COL12A1-202ENST00000345356 MED29Q9NX70 200 aa10.87□□□□□ -0.67
COL12A1-202ENST00000345356 LSM2Q9Y333 95 aaKnown RBP10.87□□□□□ -0.67
COL12A1-202ENST00000345356 BMPR1BO00238 502 aa10.87□□□□□ -0.67
COL12A1-202ENST00000345356 VSIG10L2P0DP72 767 aa10.87□□□□□ -0.67
COL12A1-202ENST00000345356 LAIR1Q6GTX8 287 aa10.87□□□□□ -0.67
COL12A1-202ENST00000345356 LINC01465Q8N7H1 131 aa10.87□□□□□ -0.67
COL12A1-202ENST00000345356 ADGRG7Q96K78 797 aa10.87□□□□□ -0.67
COL12A1-202ENST00000345356 ATP5SQ99766 215 aa10.87□□□□□ -0.67
COL12A1-202ENST00000345356 TJP1Q07157 1748 aa10.87□□□□□ -0.67
COL12A1-202ENST00000345356 PLSCR5A0PG75 271 aa10.87□□□□□ -0.67
COL12A1-202ENST00000345356 H3BNC9 293 aa10.87□□□□□ -0.67
COL12A1-202ENST00000345356 ZNF880Q6PDB4 577 aa10.87□□□□□ -0.67
COL12A1-202ENST00000345356 FBLIM1Q8WUP2 373 aa10.87□□□□□ -0.67
COL12A1-202ENST00000345356 ZG16BQ96DA0 208 aa10.87□□□□□ -0.67
COL12A1-202ENST00000345356 STARD4Q96DR4 205 aa10.87□□□□□ -0.67
COL12A1-202ENST00000345356 CCL26Q9Y258 94 aa10.87□□□□□ -0.67
COL12A1-202ENST00000345356 A0A0A6YYD5 115 aa10.87□□□□□ -0.67
COL12A1-202ENST00000345356 OGG1O15527 345 aa10.87□□□□□ -0.67
COL12A1-202ENST00000345356 ADAM20O43506 726 aa10.87□□□□□ -0.67
COL12A1-202ENST00000345356 CIDEAO60543 219 aa10.87□□□□□ -0.67
COL12A1-202ENST00000345356 DEFB133Q30KQ1 61 aa10.87□□□□□ -0.67
COL12A1-202ENST00000345356 SLC25A30Q5SVS4 291 aa10.87□□□□□ -0.67
COL12A1-202ENST00000345356 DRAM2Q6UX65 266 aa10.87□□□□□ -0.67
COL12A1-202ENST00000345356 DGAT2L6Q6ZPD8 337 aa10.87□□□□□ -0.67
COL12A1-202ENST00000345356 LHFPL2Q6ZUX7 228 aa10.87□□□□□ -0.67
COL12A1-202ENST00000345356 C19orf43Q9BQ61 176 aa10.87□□□□□ -0.67
COL12A1-202ENST00000345356 GGACTQ9BVM4 153 aa10.87□□□□□ -0.67
COL12A1-202ENST00000345356 PRSS50Q9UI38 385 aa10.87□□□□□ -0.67
COL12A1-202ENST00000345356 K7ERU9 68 aa10.86□□□□□ -0.67
COL12A1-202ENST00000345356 ARPC3O15145 178 aa10.86□□□□□ -0.67
COL12A1-202ENST00000345356 PLRG1O43660 514 aaKnown RBP10.86□□□□□ -0.67
COL12A1-202ENST00000345356 ALOX12BO75342 701 aa10.86□□□□□ -0.67
COL12A1-202ENST00000345356 RECKO95980 971 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms