RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 MALRD1Q5VYJ5 2156 aa11.76□□□□□ -0.53
TPM4-202ENST00000344824 SMIM31A0A1B0GVY4 71 aa11.76□□□□□ -0.53
TPM4-202ENST00000344824 A0A1W2PPK0 400 aa11.76□□□□□ -0.53
TPM4-202ENST00000344824 A6NHS1 94 aa11.76□□□□□ -0.53
TPM4-202ENST00000344824 INAFM1C9JVW0 142 aa11.76□□□□□ -0.53
TPM4-202ENST00000344824 SYT7O43581 403 aa11.76□□□□□ -0.53
TPM4-202ENST00000344824 LMX1BO60663 402 aa11.76□□□□□ -0.53
TPM4-202ENST00000344824 HLA-DPB1P04440 258 aa11.76□□□□□ -0.53
TPM4-202ENST00000344824 CD1AP06126 327 aa11.76□□□□□ -0.53
TPM4-202ENST00000344824 ACHEP22303 614 aa11.76□□□□□ -0.53
TPM4-202ENST00000344824 MPV17P39210 176 aa11.76□□□□□ -0.53
TPM4-202ENST00000344824 VBP1P61758 197 aa11.76□□□□□ -0.53
TPM4-202ENST00000344824 RPS11P62280 158 aaKnown RBP eCLIP11.76□□□□□ -0.53
TPM4-202ENST00000344824 TRAM1Q15629 374 aa11.76□□□□□ -0.53
TPM4-202ENST00000344824 TIMM50Q3ZCQ8 353 aa11.76□□□□□ -0.53
TPM4-202ENST00000344824 ACSM3Q53FZ2 586 aa11.76□□□□□ -0.53
TPM4-202ENST00000344824 YIF1BQ5BJH7 314 aa11.76□□□□□ -0.53
TPM4-202ENST00000344824 FAM27D1Q5T7N8 215 aa11.76□□□□□ -0.53
TPM4-202ENST00000344824 TMEM244Q5VVB8 128 aa11.76□□□□□ -0.53
TPM4-202ENST00000344824 C22orf42Q6IC83 251 aa11.76□□□□□ -0.53
TPM4-202ENST00000344824 CEACAM19Q7Z692 300 aa11.76□□□□□ -0.53
TPM4-202ENST00000344824 MS4A15Q8N5U1 240 aa11.76□□□□□ -0.53
TPM4-202ENST00000344824 OR52H1Q8NGJ2 320 aa11.76□□□□□ -0.53
TPM4-202ENST00000344824 OR13C3Q8NGS6 347 aa11.76□□□□□ -0.53
TPM4-202ENST00000344824 GPR148Q8TDV2 347 aa11.76□□□□□ -0.53
TPM4-202ENST00000344824 GTF3AQ92664 365 aaKnown RBP11.76□□□□□ -0.53
TPM4-202ENST00000344824 APOBEC3DQ96AK3 386 aaPredicted RBP11.76□□□□□ -0.53
TPM4-202ENST00000344824 ISOC1Q96CN7 298 aa11.76□□□□□ -0.53
TPM4-202ENST00000344824 REEP6Q96HR9 211 aa11.76□□□□□ -0.53
TPM4-202ENST00000344824 LYZL4Q96KX0 146 aa11.76□□□□□ -0.53
TPM4-202ENST00000344824 CENPOQ9BU64 300 aa11.76□□□□□ -0.53
TPM4-202ENST00000344824 RBM38Q9H0Z9 239 aaKnown RBP11.76□□□□□ -0.53
TPM4-202ENST00000344824 HHLA2Q9UM44 414 aa11.76□□□□□ -0.53
TPM4-202ENST00000344824 STARD10Q9Y365 291 aa11.76□□□□□ -0.53
TPM4-202ENST00000344824 TANC2Q9HCD6 1990 aa11.75□□□□□ -0.53
TPM4-202ENST00000344824 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.75□□□□□ -0.531e-6■■■□□ 16.8
TPM4-202ENST00000344824 LOC390937A0A1W2PQ73 354 aa11.75□□□□□ -0.53
TPM4-202ENST00000344824 A6NIN4 97 aa11.75□□□□□ -0.53
TPM4-202ENST00000344824 NDUFS8O00217 210 aa11.75□□□□□ -0.53
TPM4-202ENST00000344824 GABARAPO95166 117 aa11.75□□□□□ -0.53
TPM4-202ENST00000344824 SERPINA3P01011 423 aa11.75□□□□□ -0.53
TPM4-202ENST00000344824 HPXP02790 462 aa11.75□□□□□ -0.53
TPM4-202ENST00000344824 OCM2P0CE71 109 aa11.75□□□□□ -0.53
TPM4-202ENST00000344824 ZNF250P15622 560 aa11.75□□□□□ -0.53
TPM4-202ENST00000344824 ZNF16P17020 682 aaPredicted RBP11.75□□□□□ -0.53
TPM4-202ENST00000344824 USF1P22415 310 aaPredicted RBP11.75□□□□□ -0.53
TPM4-202ENST00000344824 NCS1P62166 190 aa11.75□□□□□ -0.53
TPM4-202ENST00000344824 ZNF92Q03936 586 aa11.75□□□□□ -0.53
TPM4-202ENST00000344824 MALLQ13021 153 aa11.75□□□□□ -0.53
TPM4-202ENST00000344824 TMEM91Q6ZNR0 172 aa11.75□□□□□ -0.53
TPM4-202ENST00000344824 UBASH3BQ8TF42 649 aa11.75□□□□□ -0.53
TPM4-202ENST00000344824 SGK3Q96BR1 496 aa11.75□□□□□ -0.53
TPM4-202ENST00000344824 ORAI1Q96D31 301 aa11.75□□□□□ -0.53
TPM4-202ENST00000344824 YAE1D1Q9NRH1 226 aa11.75□□□□□ -0.53
TPM4-202ENST00000344824 TXNL4BQ9NX01 149 aaKnown RBP11.75□□□□□ -0.53
TPM4-202ENST00000344824 NDUFA13Q9P0J0 144 aa11.75□□□□□ -0.53
TPM4-202ENST00000344824 RSL24D1Q9UHA3 163 aaKnown RBP11.75□□□□□ -0.53
TPM4-202ENST00000344824 DHDHQ9UQ10 334 aa11.75□□□□□ -0.53
TPM4-202ENST00000344824 IGLV3-9A0A075B6K5 115 aa11.74□□□□□ -0.53
TPM4-202ENST00000344824 A0A096LNT2 108 aa11.74□□□□□ -0.53
TPM4-202ENST00000344824 A0A0U1RQV5 110 aa11.74□□□□□ -0.53
TPM4-202ENST00000344824 A0A1B0GTI1 187 aa11.74□□□□□ -0.53
TPM4-202ENST00000344824 TRDV1A0A1B0GX56 115 aa11.74□□□□□ -0.53
TPM4-202ENST00000344824 PLSCR5A0PG75 271 aa11.74□□□□□ -0.53
TPM4-202ENST00000344824 ZNF879B4DU55 563 aa11.74□□□□□ -0.53
TPM4-202ENST00000344824 XRCC2O43543 280 aa11.74□□□□□ -0.53
TPM4-202ENST00000344824 TIMM8AO60220 97 aaPredicted RBP11.74□□□□□ -0.53
TPM4-202ENST00000344824 NCR1O76036 304 aa11.74□□□□□ -0.53
TPM4-202ENST00000344824 ISG15P05161 165 aa11.74□□□□□ -0.53
TPM4-202ENST00000344824 TMBIM6P55061 237 aa11.74□□□□□ -0.53
TPM4-202ENST00000344824 CCL8P80075 99 aa11.74□□□□□ -0.53
TPM4-202ENST00000344824 KRTAP1-1Q07627 177 aa11.74□□□□□ -0.53
TPM4-202ENST00000344824 HLXQ14774 488 aaPredicted RBP11.74□□□□□ -0.53
TPM4-202ENST00000344824 TMEM249Q2WGJ8 235 aa11.74□□□□□ -0.53
TPM4-202ENST00000344824 Q499Y3 187 aa11.74□□□□□ -0.53
TPM4-202ENST00000344824 ZMAT1Q5H9K5 638 aa11.74□□□□□ -0.53
TPM4-202ENST00000344824 COLCA1Q6ZS62 124 aa11.74□□□□□ -0.53
TPM4-202ENST00000344824 DOK3Q7L591 496 aa11.74□□□□□ -0.53
TPM4-202ENST00000344824 MRPL21Q7Z2W9 205 aaKnown RBP11.74□□□□□ -0.53
TPM4-202ENST00000344824 KLF14Q8TD94 323 aaPredicted RBP11.74□□□□□ -0.53
TPM4-202ENST00000344824 RAB2BQ8WUD1 216 aa11.74□□□□□ -0.53
TPM4-202ENST00000344824 C12orf43Q96C57 262 aaKnown RBP11.74□□□□□ -0.53
TPM4-202ENST00000344824 NARFLQ9H6Q4 476 aa11.74□□□□□ -0.53
TPM4-202ENST00000344824 NOX4Q9NPH5 578 aa11.74□□□□□ -0.53
TPM4-202ENST00000344824 TRBV5-5A0A0J9YX44 114 aa11.73□□□□□ -0.53
TPM4-202ENST00000344824 ANKRD61A6NGH8 418 aa11.73□□□□□ -0.53
TPM4-202ENST00000344824 C17orf100A8MU93 164 aa11.73□□□□□ -0.53
TPM4-202ENST00000344824 H3BMQ9 156 aa11.73□□□□□ -0.53
TPM4-202ENST00000344824 SPRY3O43610 288 aa11.73□□□□□ -0.53
TPM4-202ENST00000344824 CDC14BO60729 498 aa11.73□□□□□ -0.53
TPM4-202ENST00000344824 CALRP27797 417 aaKnown RBP11.73□□□□□ -0.53
TPM4-202ENST00000344824 NR4A2P43354 598 aa11.73□□□□□ -0.53
TPM4-202ENST00000344824 ZNF81P51508 661 aa11.73□□□□□ -0.53
TPM4-202ENST00000344824 LOXL1Q08397 574 aaPredicted RBP11.73□□□□□ -0.53
TPM4-202ENST00000344824 CTF1Q16619 201 aa11.73□□□□□ -0.53
TPM4-202ENST00000344824 MOGQ16653 247 aa11.73□□□□□ -0.53
TPM4-202ENST00000344824 CD200R1LQ6Q8B3 271 aa11.73□□□□□ -0.53
TPM4-202ENST00000344824 OR5L1Q8NGL2 311 aa11.73□□□□□ -0.53
TPM4-202ENST00000344824 TMEM106AQ96A25 262 aa11.73□□□□□ -0.53
TPM4-202ENST00000344824 FGGYQ96C11 551 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms