RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 ESX1Q8N693 406 aa13.05□□□□□ -0.32
VIPAS39-202ENST00000343765 OR6K3Q8NGY3 331 aa13.05□□□□□ -0.32
VIPAS39-202ENST00000343765 MARVELD3Q96A59 401 aa13.05□□□□□ -0.32
VIPAS39-202ENST00000343765 LINC00052Q96N35 136 aa13.05□□□□□ -0.32
VIPAS39-202ENST00000343765 S100A13Q99584 98 aa13.05□□□□□ -0.32
VIPAS39-202ENST00000343765 VRK1Q99986 396 aaPredicted RBP13.05□□□□□ -0.32
VIPAS39-202ENST00000343765 REG4Q9BYZ8 158 aa13.05□□□□□ -0.32
VIPAS39-202ENST00000343765 CRLF2Q9HC73 371 aa13.05□□□□□ -0.32
VIPAS39-202ENST00000343765 GPR173Q9NS66 373 aa13.05□□□□□ -0.32
VIPAS39-202ENST00000343765 FOXD3Q9UJU5 478 aaPredicted RBP13.05□□□□□ -0.32
VIPAS39-202ENST00000343765 CCDC187A0A096LP49 1063 aa13.04□□□□□ -0.32
VIPAS39-202ENST00000343765 MFNGO00587 321 aa13.04□□□□□ -0.32
VIPAS39-202ENST00000343765 CXCL13O43927 109 aa13.04□□□□□ -0.32
VIPAS39-202ENST00000343765 IL2RAP01589 272 aa13.04□□□□□ -0.32
VIPAS39-202ENST00000343765 B4GALT1P15291 398 aa13.04□□□□□ -0.32
VIPAS39-202ENST00000343765 MPZP25189 248 aa13.04□□□□□ -0.32
VIPAS39-202ENST00000343765 AGTR1P30556 359 aa13.04□□□□□ -0.32
VIPAS39-202ENST00000343765 LUMP51884 338 aaPredicted RBP13.04□□□□□ -0.32
VIPAS39-202ENST00000343765 WIPI1Q5MNZ9 446 aaPredicted RBP13.04□□□□□ -0.32
VIPAS39-202ENST00000343765 LPCAT3Q6P1A2 487 aa13.04□□□□□ -0.32
VIPAS39-202ENST00000343765 C1orf210Q8IVY1 113 aa13.04□□□□□ -0.32
VIPAS39-202ENST00000343765 OR5H2Q8NGV7 314 aa13.04□□□□□ -0.32
VIPAS39-202ENST00000343765 TERB2Q8NHR7 220 aa13.04□□□□□ -0.32
VIPAS39-202ENST00000343765 SSC4DQ8WTU2 575 aa13.04□□□□□ -0.32
VIPAS39-202ENST00000343765 ASB13Q8WXK3 278 aa13.04□□□□□ -0.32
VIPAS39-202ENST00000343765 ZNF75AQ96N20 296 aa13.04□□□□□ -0.32
VIPAS39-202ENST00000343765 NUDT16L1Q9BRJ7 211 aaKnown RBP13.04□□□□□ -0.32
VIPAS39-202ENST00000343765 MFSD2BA6NFX1 497 aa13.04□□□□□ -0.32
VIPAS39-202ENST00000343765 TBPP20226 339 aa13.04□□□□□ -0.32
VIPAS39-202ENST00000343765 GABRR1P24046 479 aa13.04□□□□□ -0.32
VIPAS39-202ENST00000343765 CTSSP25774 331 aa13.04□□□□□ -0.32
VIPAS39-202ENST00000343765 THBS4P35443 961 aa13.04□□□□□ -0.32
VIPAS39-202ENST00000343765 CARD18P57730 90 aa13.04□□□□□ -0.32
VIPAS39-202ENST00000343765 RPS27AP62979 156 aaKnown RBP13.04□□□□□ -0.32
VIPAS39-202ENST00000343765 CHAF1BQ13112 559 aa13.04□□□□□ -0.32
VIPAS39-202ENST00000343765 ZNF774Q6NX45 483 aa13.04□□□□□ -0.32
VIPAS39-202ENST00000343765 FAM219AQ8IW50 185 aa13.04□□□□□ -0.32
VIPAS39-202ENST00000343765 C20orf196Q8IYI0 205 aa13.04□□□□□ -0.32
VIPAS39-202ENST00000343765 ZC3H10Q96K80 434 aaKnown RBP13.04□□□□□ -0.32
VIPAS39-202ENST00000343765 PFDN2Q9UHV9 154 aa13.04□□□□□ -0.32
VIPAS39-202ENST00000343765 TCFL5Q9UL49 500 aa13.04□□□□□ -0.32
VIPAS39-202ENST00000343765 KCNMB2Q9Y691 235 aa13.04□□□□□ -0.32
VIPAS39-202ENST00000343765 SPENQ96T58 3664 aaKnown RBP13.04□□□□□ -0.32
VIPAS39-202ENST00000343765 KANTRA0A1W2PQU2 76 aa13.03□□□□□ -0.32
VIPAS39-202ENST00000343765 IGLV3-1P01715 115 aa13.03□□□□□ -0.32
VIPAS39-202ENST00000343765 HPNP05981 417 aa13.03□□□□□ -0.32
VIPAS39-202ENST00000343765 PRF1P14222 555 aa13.03□□□□□ -0.32
VIPAS39-202ENST00000343765 OR3A2P47893 321 aa13.03□□□□□ -0.32
VIPAS39-202ENST00000343765 B3GALT5-AS1P59052 145 aa13.03□□□□□ -0.32
VIPAS39-202ENST00000343765 NKAPLQ5M9Q1 402 aa13.03□□□□□ -0.32
VIPAS39-202ENST00000343765 DCAF12Q5T6F0 453 aa13.03□□□□□ -0.32
VIPAS39-202ENST00000343765 CSNK2A3Q8NEV1 391 aa13.03□□□□□ -0.32
VIPAS39-202ENST00000343765 AKR7LQ8NHP1 331 aa13.03□□□□□ -0.32
VIPAS39-202ENST00000343765 ST8SIA2Q92186 375 aa13.03□□□□□ -0.32
VIPAS39-202ENST00000343765 SPTSSAQ969W0 71 aa13.03□□□□□ -0.32
VIPAS39-202ENST00000343765 ZNF471Q9BX82 626 aaPredicted RBP13.03□□□□□ -0.32
VIPAS39-202ENST00000343765 ZNF701Q9NV72 531 aaPredicted RBP13.03□□□□□ -0.32
VIPAS39-202ENST00000343765 PADI1Q9ULC6 663 aa13.03□□□□□ -0.32
VIPAS39-202ENST00000343765 TNFSF18Q9UNG2 199 aa13.03□□□□□ -0.32
VIPAS39-202ENST00000343765 V9GYS6 101 aa13.03□□□□□ -0.32
VIPAS39-202ENST00000343765 A0A0U1RQV5 110 aa13.03□□□□□ -0.32
VIPAS39-202ENST00000343765 C19orf67A6NJJ6 358 aa13.03□□□□□ -0.32
VIPAS39-202ENST00000343765 UBBP0CG47 229 aa13.03□□□□□ -0.32
VIPAS39-202ENST00000343765 SERPINF1P36955 418 aa13.03□□□□□ -0.32
VIPAS39-202ENST00000343765 SNU13P55769 128 aaKnown RBP13.03□□□□□ -0.32
VIPAS39-202ENST00000343765 PEAR1Q5VY43 1037 aaPredicted RBP13.03□□□□□ -0.32
VIPAS39-202ENST00000343765 PDZD9Q8IXQ8 264 aa13.03□□□□□ -0.32
VIPAS39-202ENST00000343765 OR1S1Q8NH92 325 aa13.03□□□□□ -0.32
VIPAS39-202ENST00000343765 CHST5Q9GZS9 411 aa13.03□□□□□ -0.32
VIPAS39-202ENST00000343765 C5orf66Q9H5L9 145 aa13.03□□□□□ -0.32
VIPAS39-202ENST00000343765 MBD2Q9UBB5 411 aa13.03□□□□□ -0.32
VIPAS39-202ENST00000343765 LOXL2Q9Y4K0 774 aa13.03□□□□□ -0.32
VIPAS39-202ENST00000343765 GJE1A6NN92 205 aa13.03□□□□□ -0.32
VIPAS39-202ENST00000343765 SGCEO43556 437 aa13.03□□□□□ -0.32
VIPAS39-202ENST00000343765 ANGPTL7O43827 346 aa13.03□□□□□ -0.32
VIPAS39-202ENST00000343765 DUS4LO95620 317 aaKnown RBP13.03□□□□□ -0.32
VIPAS39-202ENST00000343765 ACKR3P25106 362 aa13.03□□□□□ -0.32
VIPAS39-202ENST00000343765 SUCLG1P53597 346 aaKnown RBP13.03□□□□□ -0.32
VIPAS39-202ENST00000343765 RAC3P60763 192 aa13.03□□□□□ -0.32
VIPAS39-202ENST00000343765 HGFACQ04756 655 aa13.03□□□□□ -0.32
VIPAS39-202ENST00000343765 JMJD6Q6NYC1 403 aaPredicted RBP13.03□□□□□ -0.32
VIPAS39-202ENST00000343765 FOXL2NBQ6ZUU3 175 aa13.03□□□□□ -0.32
VIPAS39-202ENST00000343765 TIPARPQ7Z3E1 657 aaKnown RBP13.03□□□□□ -0.32
VIPAS39-202ENST00000343765 TMEM105Q8N8V8 129 aa13.03□□□□□ -0.32
VIPAS39-202ENST00000343765 OR5M9Q8NGP3 310 aa13.03□□□□□ -0.32
VIPAS39-202ENST00000343765 CT55Q8WUE5 264 aa13.03□□□□□ -0.32
VIPAS39-202ENST00000343765 SGK3Q96BR1 496 aa13.03□□□□□ -0.32
VIPAS39-202ENST00000343765 SGCZQ96LD1 299 aa13.03□□□□□ -0.32
VIPAS39-202ENST00000343765 DHRS9Q9BPW9 319 aa13.03□□□□□ -0.32
VIPAS39-202ENST00000343765 EHFQ9NZC4 300 aa13.03□□□□□ -0.32
VIPAS39-202ENST00000343765 FLVCR1Q9Y5Y0 555 aa13.03□□□□□ -0.32
VIPAS39-202ENST00000343765 BOD1L1Q8NFC6 3051 aa13.02□□□□□ -0.32
VIPAS39-202ENST00000343765 A0A0D9SG52 128 aa13.02□□□□□ -0.32
VIPAS39-202ENST00000343765 FAM230AA0A1W2PPH8 454 aa13.02□□□□□ -0.32
VIPAS39-202ENST00000343765 RNF222A6NCQ9 220 aa13.02□□□□□ -0.32
VIPAS39-202ENST00000343765 RFC3P40938 356 aa13.02□□□□□ -0.32
VIPAS39-202ENST00000343765 C6orf201Q7Z4U5 140 aa13.02□□□□□ -0.32
VIPAS39-202ENST00000343765 OR13G1Q8NGZ3 307 aa13.02□□□□□ -0.32
VIPAS39-202ENST00000343765 THAP6Q8TBB0 222 aa13.02□□□□□ -0.32
VIPAS39-202ENST00000343765 RHBDD1Q8TEB9 315 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms