RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 GRHL3Q8TE85 626 aa7.24□□□□□ -1.25
ATG4A-201ENST00000343524 RHBDD1Q8TEB9 315 aa7.24□□□□□ -1.25
ATG4A-201ENST00000343524 IGSF21Q96ID5 467 aa7.24□□□□□ -1.25
ATG4A-201ENST00000343524 SDF2Q99470 211 aa7.24□□□□□ -1.25
ATG4A-201ENST00000343524 CMKLR1Q99788 373 aa7.24□□□□□ -1.25
ATG4A-201ENST00000343524 Q9N2J8 555 aa7.24□□□□□ -1.25
ATG4A-201ENST00000343524 GPR173Q9NS66 373 aa7.24□□□□□ -1.25
ATG4A-201ENST00000343524 CBLN4Q9NTU7 201 aa7.24□□□□□ -1.25
ATG4A-201ENST00000343524 GSKIPQ9P0R6 139 aa7.24□□□□□ -1.25
ATG4A-201ENST00000343524 FOXD3Q9UJU5 478 aaPredicted RBP7.24□□□□□ -1.25
ATG4A-201ENST00000343524 ANAPC10Q9UM13 185 aa7.24□□□□□ -1.25
ATG4A-201ENST00000343524 ZFP30Q9Y2G7 519 aa7.24□□□□□ -1.25
ATG4A-201ENST00000343524 Q9Y3F1 56 aa7.24□□□□□ -1.25
ATG4A-201ENST00000343524 URGCP-MRPS24S4R325 110 aa7.24□□□□□ -1.25
ATG4A-201ENST00000343524 TCRBV21S2A2A0A5A6 115 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 K7N7A8 449 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 BPNT1O95861 308 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 SRP19P09132 144 aaKnown RBP7.23□□□□□ -1.25
ATG4A-201ENST00000343524 GIMD1P0DJR0 217 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 SERPINA2P20848 420 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 BCKDHBP21953 392 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 GRPRP30550 384 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 ZNF117Q03924 483 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 PRDX4Q13162 271 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 FHL1Q13642 323 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 ZNF266Q14584 549 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 IAH1Q2TAA2 248 aaPredicted RBP7.23□□□□□ -1.25
ATG4A-201ENST00000343524 ZNF506Q5JVG8 444 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 DCST2Q5T1A1 773 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 METRNLQ641Q3 311 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 TPGS2Q68CL5 300 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 DPPA3Q6W0C5 159 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 ZNF550Q7Z398 422 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 AMZ2Q86W34 360 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 SLC16A11Q8NCK7 471 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 FAM213BQ8TBF2 198 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 OR10C1Q96KK4 312 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 LPAR2Q9HBW0 351 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 CES1P1Q9UKY3 287 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 PADI3Q9ULW8 664 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 C14orf166Q9Y224 244 aaKnown RBP7.23□□□□□ -1.25
ATG4A-201ENST00000343524 KIAA1549LQ6ZVL6 1849 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 TRBV23OR9-2A0A075B6M9 112 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 A0A1B0GWA3 101 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 A0A1W2PR48 441 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 SYNDIG1LA6NDD5 238 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 ZNF727A8MUV8 499 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 A8MXE2 369 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 PRR32B1ATL7 298 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 SOX15O60248 233 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 LDB3O75112 727 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 ZNF217O75362 1048 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 LEFTY1O75610 366 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 GSTP1P09211 210 aaKnown RBP7.23□□□□□ -1.25
ATG4A-201ENST00000343524 CTSHP09668 335 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 IFI6P09912 130 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 SLC35G6P0C7Q6 338 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 PGA4P0DJD7 388 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 PGA5P0DJD9 388 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 TMEM11P17152 192 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 IGFBP3P17936 291 aaPredicted RBP7.23□□□□□ -1.25
ATG4A-201ENST00000343524 HNF1AP20823 631 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 APLNRP35414 380 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 DNASE1L1P49184 302 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 TNFSF10P50591 281 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 CLDN6P56747 220 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 TAS2R46P59540 309 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 CDK3Q00526 305 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 LMAN2Q12907 356 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 WDR38Q5JTN6 314 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 LEMD1Q68G75 181 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 Q6ZVL8 140 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.23□□□□□ -1.25
ATG4A-201ENST00000343524 GALNTL5Q7Z4T8 443 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 MRPL41Q8IXM3 137 aaKnown RBP7.23□□□□□ -1.25
ATG4A-201ENST00000343524 COX18Q8N8Q8 333 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 AMER3Q8N944 861 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 PLPP7Q8NBV4 271 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 CHST4Q8NCG5 386 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 NOXO1Q8NFA2 376 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 OR6N2Q8NGY6 317 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 MRGPRDQ8TDS7 321 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 EMG1Q92979 244 aaKnown RBP7.23□□□□□ -1.25
ATG4A-201ENST00000343524 TMEM230Q96A57 120 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 FGGYQ96C11 551 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 BTF3L4Q96K17 158 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 KCNK15Q9H427 330 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 C5orf66Q9H5L9 145 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 SRPK3Q9UPE1 567 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 WSB1Q9Y6I7 421 aa7.23□□□□□ -1.25
ATG4A-201ENST00000343524 MDC1Q14676 2089 aaKnown RBP7.22□□□□□ -1.25
ATG4A-201ENST00000343524 LOC100996750A0A140TA64 210 aa7.22□□□□□ -1.25
ATG4A-201ENST00000343524 FEZF1A0PJY2 475 aa7.22□□□□□ -1.25
ATG4A-201ENST00000343524 XKRY2A2RUG3 117 aa7.22□□□□□ -1.25
ATG4A-201ENST00000343524 FITM1A5D6W6 292 aa7.22□□□□□ -1.25
ATG4A-201ENST00000343524 MYADML2A6NDP7 307 aa7.22□□□□□ -1.25
ATG4A-201ENST00000343524 GLOD5A6NK44 160 aa7.22□□□□□ -1.25
ATG4A-201ENST00000343524 XKRYO14609 159 aa7.22□□□□□ -1.25
ATG4A-201ENST00000343524 GEMIN2O14893 280 aaKnown RBP7.22□□□□□ -1.25
ATG4A-201ENST00000343524 PLRG1O43660 514 aaKnown RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms