RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 TCEAL7Q9BRU2 100 aa6.4□□□□□ -1.38
VCAN-202ENST00000342785 PLEKHF2Q9H8W4 249 aa6.4□□□□□ -1.38
VCAN-202ENST00000342785 LIPT2A6NK58 231 aa6.4□□□□□ -1.38
VCAN-202ENST00000342785 RNF212BA8MTL3 300 aa6.4□□□□□ -1.38
VCAN-202ENST00000342785 H3BMH7 237 aa6.4□□□□□ -1.38
VCAN-202ENST00000342785 TNFSF11O14788 317 aa6.4□□□□□ -1.38
VCAN-202ENST00000342785 ADAP1O75689 374 aa6.4□□□□□ -1.38
VCAN-202ENST00000342785 DFFBO76075 338 aa6.4□□□□□ -1.38
VCAN-202ENST00000342785 THY1P04216 161 aa6.4□□□□□ -1.38
VCAN-202ENST00000342785 EDN3P14138 238 aa6.4□□□□□ -1.38
VCAN-202ENST00000342785 IRF2P14316 349 aa6.4□□□□□ -1.38
VCAN-202ENST00000342785 EPHA8P29322 1005 aaPredicted RBP6.4□□□□□ -1.38
VCAN-202ENST00000342785 TAS2R30P59541 319 aa6.4□□□□□ -1.38
VCAN-202ENST00000342785 FZD5Q13467 585 aa6.4□□□□□ -1.38
VCAN-202ENST00000342785 OR2V1Q8NHB1 315 aa6.4□□□□□ -1.38
VCAN-202ENST00000342785 AMELYQ99218 206 aa6.4□□□□□ -1.38
VCAN-202ENST00000342785 PRRX2Q99811 253 aa6.4□□□□□ -1.38
VCAN-202ENST00000342785 AICDAQ9GZX7 198 aa6.4□□□□□ -1.38
VCAN-202ENST00000342785 MAGT1Q9H0U3 335 aa6.4□□□□□ -1.38
VCAN-202ENST00000342785 SLC39A9Q9NUM3 307 aa6.4□□□□□ -1.38
VCAN-202ENST00000342785 WNT16Q9UBV4 365 aa6.4□□□□□ -1.38
VCAN-202ENST00000342785 ZNF230Q9UIE0 474 aaPredicted RBP6.4□□□□□ -1.38
VCAN-202ENST00000342785 C5orf49A4QMS7 147 aa6.4□□□□□ -1.38
VCAN-202ENST00000342785 KLF4O43474 513 aa6.4□□□□□ -1.38
VCAN-202ENST00000342785 ZIC2O95409 532 aaPredicted RBP6.4□□□□□ -1.38
VCAN-202ENST00000342785 DUS4LO95620 317 aaKnown RBP6.4□□□□□ -1.38
VCAN-202ENST00000342785 IFNA4P05014 189 aa6.4□□□□□ -1.38
VCAN-202ENST00000342785 CD1AP06126 327 aa6.4□□□□□ -1.38
VCAN-202ENST00000342785 CTSBP07858 339 aa6.4□□□□□ -1.38
VCAN-202ENST00000342785 ADRA2CP18825 462 aa6.4□□□□□ -1.38
VCAN-202ENST00000342785 OSR2Q8N2R0 312 aa6.4□□□□□ -1.38
VCAN-202ENST00000342785 OR1F12Q8NHA8 337 aa6.4□□□□□ -1.38
VCAN-202ENST00000342785 RNF133Q8WVZ7 376 aa6.4□□□□□ -1.38
VCAN-202ENST00000342785 C9orf170A2RU37 121 aa6.4□□□□□ -1.39
VCAN-202ENST00000342785 OR6C6A6NF89 314 aa6.4□□□□□ -1.39
VCAN-202ENST00000342785 ASAH2BP0C7U1 165 aa6.4□□□□□ -1.39
VCAN-202ENST00000342785 FPR2P25090 351 aa6.4□□□□□ -1.39
VCAN-202ENST00000342785 HAAOP46952 286 aa6.4□□□□□ -1.39
VCAN-202ENST00000342785 GGTLC2Q14390 218 aa6.4□□□□□ -1.39
VCAN-202ENST00000342785 PDLIM3Q53GG5 364 aaPredicted RBP6.4□□□□□ -1.39
VCAN-202ENST00000342785 Q7L0L9 218 aa6.4□□□□□ -1.39
VCAN-202ENST00000342785 OR5AS1Q8N127 324 aa6.4□□□□□ -1.39
VCAN-202ENST00000342785 TMEM178AQ8NBL3 297 aa6.4□□□□□ -1.39
VCAN-202ENST00000342785 LFNGQ8NES3 379 aa6.4□□□□□ -1.39
VCAN-202ENST00000342785 OR11G2Q8NGC1 345 aa6.4□□□□□ -1.39
VCAN-202ENST00000342785 FRZBQ92765 325 aa6.4□□□□□ -1.39
VCAN-202ENST00000342785 RASL10BQ96S79 203 aa6.4□□□□□ -1.39
VCAN-202ENST00000342785 NARFLQ9H6Q4 476 aa6.4□□□□□ -1.39
VCAN-202ENST00000342785 PLEKHA3Q9HB20 300 aa6.4□□□□□ -1.39
VCAN-202ENST00000342785 GCM1Q9NP62 436 aa6.4□□□□□ -1.39
VCAN-202ENST00000342785 PRMT8Q9NR22 394 aaPredicted RBP6.4□□□□□ -1.39
VCAN-202ENST00000342785 ZNF816-ZNF321PA0A0X1KG74 233 aa6.4□□□□□ -1.39
VCAN-202ENST00000342785 OR2M5A3KFT3 312 aa6.4□□□□□ -1.39
VCAN-202ENST00000342785 DEGS1O15121 323 aa6.4□□□□□ -1.39
VCAN-202ENST00000342785 MBTPS2O43462 519 aa6.4□□□□□ -1.39
VCAN-202ENST00000342785 DHRS3O75911 302 aa6.4□□□□□ -1.39
VCAN-202ENST00000342785 NGFRP08138 427 aa6.4□□□□□ -1.39
VCAN-202ENST00000342785 FUT3P21217 361 aa6.4□□□□□ -1.39
VCAN-202ENST00000342785 GLRA1P23415 457 aa6.4□□□□□ -1.39
VCAN-202ENST00000342785 F2RL1P55085 397 aa6.4□□□□□ -1.39
VCAN-202ENST00000342785 RAB32Q13637 225 aa6.4□□□□□ -1.39
VCAN-202ENST00000342785 PDCD1Q15116 288 aa6.4□□□□□ -1.39
VCAN-202ENST00000342785 LHFPL2Q6ZUX7 228 aa6.4□□□□□ -1.39
VCAN-202ENST00000342785 C6orf201Q7Z4U5 140 aa6.4□□□□□ -1.39
VCAN-202ENST00000342785 SLC22A18ASQ8N1D0 253 aa6.4□□□□□ -1.39
VCAN-202ENST00000342785 SLC26A10Q8NG04 563 aa6.4□□□□□ -1.39
VCAN-202ENST00000342785 SLC25A38Q96DW6 304 aa6.4□□□□□ -1.39
VCAN-202ENST00000342785 LIN37Q96GY3 246 aaPredicted RBP6.4□□□□□ -1.39
VCAN-202ENST00000342785 LOXL2Q9Y4K0 774 aa6.4□□□□□ -1.39
VCAN-202ENST00000342785 ARPC4-TTLL3A0A0A6YYG9 625 aa6.4□□□□□ -1.39
VCAN-202ENST00000342785 LEUTXA8MZ59 168 aa6.4□□□□□ -1.39
VCAN-202ENST00000342785 TRIM77I1YAP6 450 aa6.4□□□□□ -1.39
VCAN-202ENST00000342785 KIR3DL2P43630 455 aa6.4□□□□□ -1.39
VCAN-202ENST00000342785 GABRA2P47869 451 aa6.4□□□□□ -1.39
VCAN-202ENST00000342785 CEBPEQ15744 281 aa6.4□□□□□ -1.39
VCAN-202ENST00000342785 TMEM182Q6ZP80 229 aaPredicted RBP6.4□□□□□ -1.39
VCAN-202ENST00000342785 NAA40Q86UY6 237 aa6.4□□□□□ -1.39
VCAN-202ENST00000342785 C20orf196Q8IYI0 205 aa6.4□□□□□ -1.39
VCAN-202ENST00000342785 OR10J5Q8NHC4 309 aa6.4□□□□□ -1.39
VCAN-202ENST00000342785 TRAF4Q9BUZ4 470 aaPredicted RBP6.4□□□□□ -1.39
VCAN-202ENST00000342785 ELF5Q9UKW6 265 aaPredicted RBP6.4□□□□□ -1.39
VCAN-202ENST00000342785 C4orf47A7E2U8 309 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 HSD17B6O14756 317 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 EFEMP2O95967 443 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 RECKO95980 971 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 GRPP07492 148 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 PATE4P0C8F1 98 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 VSIG8P0DPA2 414 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 BCKDHBP21953 392 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 HOXD11P31277 338 aaPredicted RBP6.39□□□□□ -1.39
VCAN-202ENST00000342785 OR3A4PP47883 348 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 PRSS12P56730 875 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 ARF1P84077 181 aaKnown RBP6.39□□□□□ -1.39
VCAN-202ENST00000342785 ARTNQ5T4W7 220 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 FHL5Q5TD97 284 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 CATSPERDQ86XM0 798 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 OR2I1PQ8NGU4 316 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 KCNE4Q8WWG9 221 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 ZNF75AQ96N20 296 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 GPX7Q96SL4 187 aaPredicted RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms