RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 PDLIM4P50479 330 aa16.43■□□□□ 0.22
SMPD1-201ENST00000342245 TAS2R46P59540 309 aa16.43■□□□□ 0.22
SMPD1-201ENST00000342245 UNC119Q13432 240 aa16.43■□□□□ 0.22
SMPD1-201ENST00000342245 TCTN1Q2MV58 587 aa16.43■□□□□ 0.22
SMPD1-201ENST00000342245 C4orf17Q53FE4 359 aa16.43■□□□□ 0.22
SMPD1-201ENST00000342245 SLC22A24Q8N4F4 322 aa16.43■□□□□ 0.22
SMPD1-201ENST00000342245 OR10A7Q8NGE5 316 aa16.43■□□□□ 0.22
SMPD1-201ENST00000342245 NEK7Q8TDX7 302 aa16.43■□□□□ 0.22
SMPD1-201ENST00000342245 ARSGQ96EG1 525 aa16.43■□□□□ 0.22
SMPD1-201ENST00000342245 AMELYQ99218 206 aa16.43■□□□□ 0.22
SMPD1-201ENST00000342245 SRD5A3Q9H8P0 318 aa16.43■□□□□ 0.22
SMPD1-201ENST00000342245 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.42■□□□□ 0.22
SMPD1-201ENST00000342245 PNPP00491 289 aa16.42■□□□□ 0.22
SMPD1-201ENST00000342245 TLE4Q04727 773 aa16.42■□□□□ 0.22
SMPD1-201ENST00000342245 TAF9Q16594 264 aa16.42■□□□□ 0.22
SMPD1-201ENST00000342245 NOXO1Q8NFA2 376 aa16.42■□□□□ 0.22
SMPD1-201ENST00000342245 SERINC2Q96SA4 455 aa16.42■□□□□ 0.22
SMPD1-201ENST00000342245 CNTD2Q9H8S5 307 aa16.42■□□□□ 0.22
SMPD1-201ENST00000342245 SCAF4O95104 1147 aaKnown RBP16.42■□□□□ 0.22
SMPD1-201ENST00000342245 GNALP38405 381 aa16.42■□□□□ 0.22
SMPD1-201ENST00000342245 NOVA1P51513 510 aaKnown RBP16.42■□□□□ 0.22
SMPD1-201ENST00000342245 ZNF74Q16587 644 aa16.42■□□□□ 0.22
SMPD1-201ENST00000342245 DMRTA1Q5VZB9 504 aa16.42■□□□□ 0.22
SMPD1-201ENST00000342245 TMEM182Q6ZP80 229 aaPredicted RBP16.42■□□□□ 0.22
SMPD1-201ENST00000342245 OR5L2Q8NGL0 311 aa16.42■□□□□ 0.22
SMPD1-201ENST00000342245 WFDC1Q9HC57 220 aa16.42■□□□□ 0.22
SMPD1-201ENST00000342245 PARD6AQ9NPB6 346 aa16.42■□□□□ 0.22
SMPD1-201ENST00000342245 GEMIN2O14893 280 aaKnown RBP16.41■□□□□ 0.22
SMPD1-201ENST00000342245 HSPA12AO43301 675 aa16.41■□□□□ 0.22
SMPD1-201ENST00000342245 C1QL1O75973 258 aa16.41■□□□□ 0.22
SMPD1-201ENST00000342245 PNMTP11086 282 aa16.41■□□□□ 0.22
SMPD1-201ENST00000342245 OR3A2P47893 321 aa16.41■□□□□ 0.22
SMPD1-201ENST00000342245 BTNL3Q6UXE8 466 aa16.41■□□□□ 0.22
SMPD1-201ENST00000342245 ADIPOR2Q86V24 386 aa16.41■□□□□ 0.22
SMPD1-201ENST00000342245 OR4X1Q8NH49 305 aa16.41■□□□□ 0.22
SMPD1-201ENST00000342245 FAM230AA0A1W2PPH8 454 aa16.41■□□□□ 0.22
SMPD1-201ENST00000342245 KLK2P20151 261 aa16.41■□□□□ 0.22
SMPD1-201ENST00000342245 CMPK1P30085 196 aa16.41■□□□□ 0.22
SMPD1-201ENST00000342245 IL13RA2Q14627 380 aa16.41■□□□□ 0.22
SMPD1-201ENST00000342245 ZNF141Q15928 474 aa16.41■□□□□ 0.22
SMPD1-201ENST00000342245 AADACL3Q5VUY0 350 aa16.41■□□□□ 0.22
SMPD1-201ENST00000342245 OR13G1Q8NGZ3 307 aa16.41■□□□□ 0.22
SMPD1-201ENST00000342245 HOXB13Q92826 284 aaPredicted RBP16.41■□□□□ 0.22
SMPD1-201ENST00000342245 HIPK2Q9H2X6 1198 aa16.41■□□□□ 0.22
SMPD1-201ENST00000342245 IL21Q9HBE4 155 aa16.41■□□□□ 0.22
SMPD1-201ENST00000342245 OBSL1O75147 1896 aa16.4■□□□□ 0.22
SMPD1-201ENST00000342245 C4orf47A7E2U8 309 aa16.4■□□□□ 0.22
SMPD1-201ENST00000342245 A8MVM7 634 aa16.4■□□□□ 0.22
SMPD1-201ENST00000342245 HBE1P02100 147 aa16.4■□□□□ 0.22
SMPD1-201ENST00000342245 VSIG8P0DPA2 414 aa16.4■□□□□ 0.22
SMPD1-201ENST00000342245 PI3P19957 117 aa16.4■□□□□ 0.22
SMPD1-201ENST00000342245 SP3Q02447 781 aa16.4■□□□□ 0.22
SMPD1-201ENST00000342245 ICAM4Q14773 271 aa16.4■□□□□ 0.22
SMPD1-201ENST00000342245 PCK2Q16822 640 aa16.4■□□□□ 0.22
SMPD1-201ENST00000342245 FBXW9Q5XUX1 488 aa16.4■□□□□ 0.22
SMPD1-201ENST00000342245 RNF44Q7L0R7 432 aa16.4■□□□□ 0.22
SMPD1-201ENST00000342245 ZAR1Q86SH2 424 aa16.4■□□□□ 0.22
SMPD1-201ENST00000342245 OR4N5Q8IXE1 308 aa16.4■□□□□ 0.22
SMPD1-201ENST00000342245 ZNF440Q8IYI8 595 aa16.4■□□□□ 0.22
SMPD1-201ENST00000342245 ARHGEF39Q8N4T4 335 aa16.4■□□□□ 0.22
SMPD1-201ENST00000342245 C10orf53Q8N6V4 93 aa16.4■□□□□ 0.22
SMPD1-201ENST00000342245 CYB561D1Q8N8Q1 229 aa16.4■□□□□ 0.22
SMPD1-201ENST00000342245 OR2L3Q8NG85 312 aa16.4■□□□□ 0.22
SMPD1-201ENST00000342245 WFIKKN2Q8TEU8 576 aa16.4■□□□□ 0.22
SMPD1-201ENST00000342245 DNASE2BQ8WZ79 361 aa16.4■□□□□ 0.22
SMPD1-201ENST00000342245 SH3BGRL3Q9H299 93 aa16.4■□□□□ 0.22
SMPD1-201ENST00000342245 SLC5A6Q9Y289 635 aa16.4■□□□□ 0.22
SMPD1-201ENST00000342245 R4GMQ9 66 aa16.4■□□□□ 0.22
SMPD1-201ENST00000342245 GLRA1P23415 457 aa16.4■□□□□ 0.22
SMPD1-201ENST00000342245 TM4SF4P48230 202 aa16.4■□□□□ 0.22
SMPD1-201ENST00000342245 EMP2P54851 167 aa16.4■□□□□ 0.22
SMPD1-201ENST00000342245 FZD2Q14332 565 aa16.4■□□□□ 0.22
SMPD1-201ENST00000342245 ZNF266Q14584 549 aa16.4■□□□□ 0.22
SMPD1-201ENST00000342245 POM121L1PQ3SYA9 428 aa16.4■□□□□ 0.22
SMPD1-201ENST00000342245 C1orf189Q5VU69 101 aa16.4■□□□□ 0.22
SMPD1-201ENST00000342245 SPSB3Q6PJ21 355 aa16.4■□□□□ 0.22
SMPD1-201ENST00000342245 PRSS58Q8IYP2 241 aa16.4■□□□□ 0.22
SMPD1-201ENST00000342245 NT5CQ8TCD5 201 aa16.4■□□□□ 0.22
SMPD1-201ENST00000342245 HLA-CQ95604 372 aa16.4■□□□□ 0.22
SMPD1-201ENST00000342245 COX14Q96I36 57 aa16.4■□□□□ 0.22
SMPD1-201ENST00000342245 LMF2Q9BU23 707 aaKnown RBP16.4■□□□□ 0.22
SMPD1-201ENST00000342245 COL4A6Q14031 1691 aa16.4■□□□□ 0.22
SMPD1-201ENST00000342245 A0A1W2PQ45 241 aaPredicted RBP16.39■□□□□ 0.21
SMPD1-201ENST00000342245 A0A1W2PQY0 241 aa16.39■□□□□ 0.21
SMPD1-201ENST00000342245 TMEM14DPA8MWL7 114 aa16.39■□□□□ 0.21
SMPD1-201ENST00000342245 AMY2BP19961 511 aa16.39■□□□□ 0.21
SMPD1-201ENST00000342245 RPS27P42677 84 aaKnown RBP16.39■□□□□ 0.21
SMPD1-201ENST00000342245 PLXDC2Q6UX71 529 aa16.39■□□□□ 0.21
SMPD1-201ENST00000342245 NUP54Q7Z3B4 507 aa16.39■□□□□ 0.21
SMPD1-201ENST00000342245 C22orf15Q8WYQ4 148 aa16.39■□□□□ 0.21
SMPD1-201ENST00000342245 TSPAN32Q96QS1 320 aa16.39■□□□□ 0.21
SMPD1-201ENST00000342245 LPAR4Q99677 370 aa16.39■□□□□ 0.21
SMPD1-201ENST00000342245 CABLES2Q9BTV7 478 aa16.39■□□□□ 0.21
SMPD1-201ENST00000342245 OR1A2Q9Y585 309 aa16.39■□□□□ 0.21
SMPD1-201ENST00000342245 A0A1B0GU03 582 aa16.39■□□□□ 0.21
SMPD1-201ENST00000342245 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.39■□□□□ 0.21
SMPD1-201ENST00000342245 XKRY2A2RUG3 117 aa16.39■□□□□ 0.21
SMPD1-201ENST00000342245 XKRYO14609 159 aa16.39■□□□□ 0.21
SMPD1-201ENST00000342245 B3GALT2O43825 422 aa16.39■□□□□ 0.21
SMPD1-201ENST00000342245 OR6A2O95222 327 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms