RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 HOXB5P09067 269 aa11.31□□□□□ -0.6
LIN54-201ENST00000340417 CELA3AP09093 270 aa11.31□□□□□ -0.6
LIN54-201ENST00000340417 OR2B11Q5JQS5 317 aa11.31□□□□□ -0.6
LIN54-201ENST00000340417 DVL3Q92997 716 aaPredicted RBP11.31□□□□□ -0.6
LIN54-201ENST00000340417 FCRL1Q96LA6 429 aa11.31□□□□□ -0.6
LIN54-201ENST00000340417 IMMP1LQ96LU5 166 aa11.31□□□□□ -0.6
LIN54-201ENST00000340417 CACNA1BQ00975 2339 aa11.31□□□□□ -0.6
LIN54-201ENST00000340417 NPIPB8E9PQR5 432 aa11.31□□□□□ -0.6
LIN54-201ENST00000340417 J3QKU1 62 aa11.31□□□□□ -0.6
LIN54-201ENST00000340417 PHF1O43189 567 aaPredicted RBP11.31□□□□□ -0.6
LIN54-201ENST00000340417 PRSS12P56730 875 aa11.31□□□□□ -0.6
LIN54-201ENST00000340417 PHLDA2Q53GA4 152 aa11.31□□□□□ -0.6
LIN54-201ENST00000340417 UBAC2Q8NBM4 344 aa11.31□□□□□ -0.6
LIN54-201ENST00000340417 CACNG2Q9Y698 323 aa11.31□□□□□ -0.6
LIN54-201ENST00000340417 PPIAL4EA0A075B759 164 aa11.31□□□□□ -0.6
LIN54-201ENST00000340417 MEX3AA1L020 520 aaKnown RBP11.31□□□□□ -0.6
LIN54-201ENST00000340417 PPIAL4DF5H284 164 aa11.31□□□□□ -0.6
LIN54-201ENST00000340417 CDK2AP1O14519 115 aa11.31□□□□□ -0.6
LIN54-201ENST00000340417 MED6O75586 246 aa11.31□□□□□ -0.6
LIN54-201ENST00000340417 NGFP01138 241 aa11.31□□□□□ -0.6
LIN54-201ENST00000340417 PPIAL4FP0DN26 164 aa11.31□□□□□ -0.6
LIN54-201ENST00000340417 CCL27Q9Y4X3 112 aa11.31□□□□□ -0.6
LIN54-201ENST00000340417 PPIAL4AQ9Y536 164 aa11.31□□□□□ -0.6
LIN54-201ENST00000340417 CDC20BQ86Y33 519 aa11.3□□□□□ -0.6
LIN54-201ENST00000340417 ADPRHL1Q8NDY3 354 aa11.3□□□□□ -0.6
LIN54-201ENST00000340417 ICAM5Q9UMF0 924 aa11.3□□□□□ -0.6
LIN54-201ENST00000340417 ZNHIT1O43257 154 aa11.3□□□□□ -0.6
LIN54-201ENST00000340417 RFPL3SP0C7P2 107 aa11.3□□□□□ -0.6
LIN54-201ENST00000340417 DBPQ10586 325 aaPredicted RBP11.3□□□□□ -0.6
LIN54-201ENST00000340417 APCDD1LQ8NCL9 501 aa11.3□□□□□ -0.6
LIN54-201ENST00000340417 OR10V1Q8NGI7 309 aa11.3□□□□□ -0.6
LIN54-201ENST00000340417 DPF1Q92782 380 aa11.3□□□□□ -0.6
LIN54-201ENST00000340417 FLVCR1Q9Y5Y0 555 aa11.3□□□□□ -0.6
LIN54-201ENST00000340417 TRDV1A0A1B0GX56 115 aa11.3□□□□□ -0.6
LIN54-201ENST00000340417 TRIM64CA6NLI5 447 aa11.3□□□□□ -0.6
LIN54-201ENST00000340417 WISP3O95389 354 aaPredicted RBP11.3□□□□□ -0.6
LIN54-201ENST00000340417 FABP1P07148 127 aa11.3□□□□□ -0.6
LIN54-201ENST00000340417 PLA2G5P39877 138 aa11.3□□□□□ -0.6
LIN54-201ENST00000340417 ZNF181Q2M3W8 571 aa11.3□□□□□ -0.6
LIN54-201ENST00000340417 GPR157Q5UAW9 335 aa11.3□□□□□ -0.6
LIN54-201ENST00000340417 FYTTD1Q96QD9 318 aaKnown RBP11.3□□□□□ -0.6
LIN54-201ENST00000340417 NKX2-6A6NCS4 301 aa11.3□□□□□ -0.6
LIN54-201ENST00000340417 HMX3A6NHT5 357 aa11.3□□□□□ -0.6
LIN54-201ENST00000340417 ERVH48-1M5A8F1 160 aa11.3□□□□□ -0.6
LIN54-201ENST00000340417 CLDN1O95832 211 aa11.3□□□□□ -0.6
LIN54-201ENST00000340417 CDK5R1Q15078 307 aa11.3□□□□□ -0.6
LIN54-201ENST00000340417 OR52W1Q6IF63 320 aa11.3□□□□□ -0.6
LIN54-201ENST00000340417 DEGS2Q6QHC5 323 aa11.3□□□□□ -0.6
LIN54-201ENST00000340417 NRG4Q8WWG1 115 aa11.3□□□□□ -0.6
LIN54-201ENST00000340417 SMIM19Q96E16 107 aa11.3□□□□□ -0.6
LIN54-201ENST00000340417 CCDC32Q9BV29 185 aa11.3□□□□□ -0.6
LIN54-201ENST00000340417 OR2J1Q9GZK6 312 aa11.3□□□□□ -0.6
LIN54-201ENST00000340417 ZNF665Q9H7R5 613 aa11.3□□□□□ -0.6
LIN54-201ENST00000340417 RNF150Q9ULK6 438 aa11.3□□□□□ -0.6
LIN54-201ENST00000340417 DOCK6Q96HP0 2047 aa11.3□□□□□ -0.6
LIN54-201ENST00000340417 PYCARD-AS1I3L0S3 204 aa11.29□□□□□ -0.6
LIN54-201ENST00000340417 SDCBPO00560 298 aaPredicted RBP11.29□□□□□ -0.6
LIN54-201ENST00000340417 ST8SIA5O15466 376 aa11.29□□□□□ -0.6
LIN54-201ENST00000340417 MGMTP16455 207 aa11.29□□□□□ -0.6
LIN54-201ENST00000340417 SRPXP78539 464 aa11.29□□□□□ -0.6
LIN54-201ENST00000340417 IGLV3-21P80748 117 aaPredicted RBP11.29□□□□□ -0.6
LIN54-201ENST00000340417 MFGE8Q08431 387 aaPredicted RBP11.29□□□□□ -0.6
LIN54-201ENST00000340417 PDLIM3Q53GG5 364 aaPredicted RBP11.29□□□□□ -0.6
LIN54-201ENST00000340417 MUC15Q8N387 334 aa11.29□□□□□ -0.6
LIN54-201ENST00000340417 ADAMTS17Q8TE56 1095 aa11.29□□□□□ -0.6
LIN54-201ENST00000340417 RNASE6Q93091 150 aaKnown RBP11.29□□□□□ -0.6
LIN54-201ENST00000340417 C7orf34Q96L11 122 aa11.29□□□□□ -0.6
LIN54-201ENST00000340417 COMMD5Q9GZQ3 224 aa11.29□□□□□ -0.6
LIN54-201ENST00000340417 ZNF724A8MTY0 619 aa11.29□□□□□ -0.6
LIN54-201ENST00000340417 F5H0A9 414 aaPredicted RBP11.29□□□□□ -0.6
LIN54-201ENST00000340417 FAM27E3Q08E93 113 aa11.29□□□□□ -0.6
LIN54-201ENST00000340417 DLL3Q9NYJ7 618 aa11.29□□□□□ -0.6
LIN54-201ENST00000340417 COL19A1Q14993 1142 aa11.29□□□□□ -0.6
LIN54-201ENST00000340417 MESTQ5EB52 335 aa11.29□□□□□ -0.6
LIN54-201ENST00000340417 K7ENP7 123 aa11.29□□□□□ -0.6
LIN54-201ENST00000340417 ZG16O60844 167 aa11.29□□□□□ -0.6
LIN54-201ENST00000340417 SLC22A5O76082 557 aa11.29□□□□□ -0.6
LIN54-201ENST00000340417 MT-ND4P03905 459 aa11.29□□□□□ -0.6
LIN54-201ENST00000340417 ADRB1P08588 477 aa11.29□□□□□ -0.6
LIN54-201ENST00000340417 NPY4RP50391 375 aa11.29□□□□□ -0.6
LIN54-201ENST00000340417 UCP2P55851 309 aa11.29□□□□□ -0.6
LIN54-201ENST00000340417 PRSS35Q8N3Z0 413 aa11.29□□□□□ -0.6
LIN54-201ENST00000340417 GCM1Q9NP62 436 aa11.29□□□□□ -0.6
LIN54-201ENST00000340417 NLKQ9UBE8 527 aa11.29□□□□□ -0.6
LIN54-201ENST00000340417 ATP6V1G2-DDX39BF2Z307 99 aa11.29□□□□□ -0.6
LIN54-201ENST00000340417 ARPC1BO15143 372 aaKnown RBP11.29□□□□□ -0.6
LIN54-201ENST00000340417 IFNA1P01562 189 aa11.29□□□□□ -0.6
LIN54-201ENST00000340417 ADH4P08319 380 aa11.29□□□□□ -0.6
LIN54-201ENST00000340417 HOXB1P14653 301 aaPredicted RBP11.29□□□□□ -0.6
LIN54-201ENST00000340417 FAHD1Q6P587 224 aa11.29□□□□□ -0.6
LIN54-201ENST00000340417 TMEM179BQ7Z7N9 219 aa11.29□□□□□ -0.6
LIN54-201ENST00000340417 ZNF519Q8TB69 540 aa11.29□□□□□ -0.6
LIN54-201ENST00000340417 HLXQ14774 488 aaPredicted RBP11.28□□□□□ -0.6
LIN54-201ENST00000340417 OR1K1Q8NGR3 316 aa11.28□□□□□ -0.6
LIN54-201ENST00000340417 OR13C5Q8NGS8 318 aa11.28□□□□□ -0.6
LIN54-201ENST00000340417 OR13D1Q8NGV5 346 aa11.28□□□□□ -0.6
LIN54-201ENST00000340417 MBOAT4Q96T53 435 aa11.28□□□□□ -0.6
LIN54-201ENST00000340417 TINAGL1Q9GZM7 467 aaPredicted RBP11.28□□□□□ -0.6
LIN54-201ENST00000340417 E9PLN8 166 aa11.28□□□□□ -0.6
LIN54-201ENST00000340417 HAX1O00165 279 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms