RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 PRAMEF4O60810 478 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 CNIH1O95406 144 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 ZP3P21754 424 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 FAM3AP98173 230 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 FAM53BQ14153 422 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 CEBPEQ15744 281 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 C11orf91Q3C1V1 193 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 PRAMEF9Q5VWM5 478 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 PLXDC2Q6UX71 529 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 DOLPP1Q86YN1 238 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 NAGSQ8N159 534 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 RNF148Q8N7C7 305 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 OR10A7Q8NGE5 316 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 OR4B1Q8NGF8 309 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 OR51G2Q8NGK0 314 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 SFRP2Q96HF1 295 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 PITX2Q99697 317 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 RBM24Q9BX46 236 aaKnown RBP2.97□□□□□ -1.93
CSMD3-202ENST00000339701 UCK1Q9HA47 277 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 CTSFQ9UBX1 484 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 ZBTB32Q9Y2Y4 487 aaPredicted RBP2.97□□□□□ -1.93
CSMD3-202ENST00000339701 FAM90A26D6RGX4 464 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 CHEK1O14757 476 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 TIMM23O14925 209 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 SCAMP2O15127 329 aaKnown RBP2.97□□□□□ -1.93
CSMD3-202ENST00000339701 PIAS1O75925 651 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 DUS4LO95620 317 aaKnown RBP2.97□□□□□ -1.93
CSMD3-202ENST00000339701 TBX18O95935 607 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 CXCL10P02778 98 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 SNRNP70P08621 437 aaKnown RBP2.97□□□□□ -1.93
CSMD3-202ENST00000339701 NME2P22392 152 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 ASIPP42127 132 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 CA7P43166 264 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 PDLIM4P50479 330 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 CNN1P51911 297 aaKnown RBP2.97□□□□□ -1.93
CSMD3-202ENST00000339701 PPP1CBP62140 327 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 BTG2P78543 158 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 CDK5R2Q13319 367 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 TWIST1Q15672 202 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 LRRC75BQ2VPJ9 315 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 ZNF658BQ4V348 819 aaPredicted RBP2.97□□□□□ -1.93
CSMD3-202ENST00000339701 NKAIN2Q5VXU1 208 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 SFXN4Q6P4A7 337 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 OVCH2Q7RTZ1 564 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 COMMD6Q7Z4G1 85 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 PELI3Q8N2H9 469 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 NUP43Q8NFH3 380 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 NUDT10Q8NFP7 164 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 OR5H6Q8NGV6 325 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 OR6N2Q8NGY6 317 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 MRPL24Q96A35 216 aaKnown RBP2.97□□□□□ -1.93
CSMD3-202ENST00000339701 TMEM45BQ96B21 275 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 RASD2Q96D21 266 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 ZMYND19Q96E35 227 aaPredicted RBP2.97□□□□□ -1.93
CSMD3-202ENST00000339701 FIZ1Q96SL8 496 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 H0YIG0 161 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 H3BQ85 93 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 CTDSPLO15194 276 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 SMAD9O15198 467 aaKnown RBP2.97□□□□□ -1.93
CSMD3-202ENST00000339701 SCO2O43819 266 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 DCTDP32321 178 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 PGGT1BP53609 377 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 CCL7P80098 99 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 ZNF691Q5VV52 312 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 SUSD1Q6UWL2 747 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 SHISA6Q6ZSJ9 500 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 LRRC18Q8N456 261 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 SIRT6Q8N6T7 355 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 SLC26A10Q8NG04 563 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 OR4C5Q8NGB2 326 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 OR10P1Q8NGE3 313 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 SMIM4Q8WVI0 70 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 SIGLEC10Q96LC7 697 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 GABARAPL1Q9H0R8 117 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 CSNK1G1Q9HCP0 422 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 INIPQ9NRY2 104 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 CENPMQ9NSP4 180 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 RALYQ9UKM9 306 aaKnown RBP2.97□□□□□ -1.93
CSMD3-202ENST00000339701 MSRB2Q9Y3D2 182 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 FABP7O15540 132 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 ZNF749O43361 778 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 OR4F21O95013 312 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 PNLIPP16233 465 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 F2RP25116 425 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 ARF6P62330 175 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 PIGFQ07326 219 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 LHX8Q68G74 356 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 PAQR6Q6TCH4 344 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 ZCCHC23Q6ZST2 131 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 OR5D13Q8NGL4 314 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 TMEM239Q8WW34 195 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 WBP2Q969T9 261 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 TVP23CQ96ET8 276 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 RAB33BQ9H082 229 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 SLC35B3Q9H1N7 401 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 GSX1Q9H4S2 264 aaPredicted RBP2.97□□□□□ -1.93
CSMD3-202ENST00000339701 DMRT3Q9NQL9 472 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 TAS2R5Q9NYW4 299 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 STARD10Q9Y365 291 aa2.97□□□□□ -1.93
CSMD3-202ENST00000339701 A0A1B0GV50 99 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms