RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 FBXO17Q96EF6 278 aa16.6■□□□□ 0.25
PSPC1-201ENST00000338910 SLC26A1Q9H2B4 701 aa16.6■□□□□ 0.25
PSPC1-201ENST00000338910 OR2S2Q9NQN1 319 aa16.6■□□□□ 0.25
PSPC1-201ENST00000338910 OR5AC2Q9NZP5 309 aa16.6■□□□□ 0.25
PSPC1-201ENST00000338910 CACFD1Q9UGQ2 172 aa16.6■□□□□ 0.25
PSPC1-201ENST00000338910 TIMM10BQ9Y5J6 103 aa16.6■□□□□ 0.25
PSPC1-201ENST00000338910 FREM2Q5SZK8 3169 aa16.6■□□□□ 0.25
PSPC1-201ENST00000338910 METTL21EPA6NDL7 271 aa16.59■□□□□ 0.25
PSPC1-201ENST00000338910 CPT2P23786 658 aa16.59■□□□□ 0.25
PSPC1-201ENST00000338910 TXNIPQ9H3M7 391 aa16.59■□□□□ 0.25
PSPC1-201ENST00000338910 MRPL22Q9NWU5 206 aaKnown RBP16.59■□□□□ 0.25
PSPC1-201ENST00000338910 C19orf25Q9UFG5 118 aaPredicted RBP16.59■□□□□ 0.25
PSPC1-201ENST00000338910 RPH3AQ9Y2J0 694 aaPredicted RBP16.59■□□□□ 0.25
PSPC1-201ENST00000338910 FBXO24O75426 580 aa16.59■□□□□ 0.25
PSPC1-201ENST00000338910 MT-ND4LP03901 98 aa16.59■□□□□ 0.25
PSPC1-201ENST00000338910 CD80P33681 288 aa16.59■□□□□ 0.25
PSPC1-201ENST00000338910 INSM1Q01101 510 aaPredicted RBP16.59■□□□□ 0.25
PSPC1-201ENST00000338910 TRA2AQ13595 282 aaKnown RBP eCLIP16.59■□□□□ 0.251e-6■■■□□ 17.1
PSPC1-201ENST00000338910 HOGA1Q86XE5 327 aa16.59■□□□□ 0.25
PSPC1-201ENST00000338910 ZNF519Q8TB69 540 aa16.59■□□□□ 0.25
PSPC1-201ENST00000338910 MARCH1Q8TCQ1 289 aa16.59■□□□□ 0.25
PSPC1-201ENST00000338910 DEFB126Q9BYW3 111 aa16.59■□□□□ 0.25
PSPC1-201ENST00000338910 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.58■□□□□ 0.25
PSPC1-201ENST00000338910 H3BML4 177 aa16.58■□□□□ 0.25
PSPC1-201ENST00000338910 LRP3O75074 770 aa16.58■□□□□ 0.25
PSPC1-201ENST00000338910 TAS2R31P59538 309 aa16.58■□□□□ 0.25
PSPC1-201ENST00000338910 FOXF1Q12946 379 aa16.58■□□□□ 0.25
PSPC1-201ENST00000338910 BTNL8Q6UX41 500 aa16.58■□□□□ 0.25
PSPC1-201ENST00000338910 ST8SIA1Q92185 356 aa16.58■□□□□ 0.25
PSPC1-201ENST00000338910 SLC39A7Q92504 469 aa16.58■□□□□ 0.25
PSPC1-201ENST00000338910 MR1Q95460 341 aa16.58■□□□□ 0.25
PSPC1-201ENST00000338910 SLC5A7Q9GZV3 580 aa16.58■□□□□ 0.25
PSPC1-201ENST00000338910 METTL7AQ9H8H3 244 aa16.58■□□□□ 0.25
PSPC1-201ENST00000338910 PPP4R1LQ9P1A2 415 aa16.58■□□□□ 0.25
PSPC1-201ENST00000338910 RAB22AQ9UL26 194 aa16.58■□□□□ 0.25
PSPC1-201ENST00000338910 FTCDNL1E5RQL4 147 aa16.58■□□□□ 0.24
PSPC1-201ENST00000338910 IGHV2-5P01817 119 aa16.58■□□□□ 0.24
PSPC1-201ENST00000338910 KLK3P07288 261 aaPredicted RBP16.58■□□□□ 0.24
PSPC1-201ENST00000338910 SPARCP09486 303 aa16.58■□□□□ 0.24
PSPC1-201ENST00000338910 AKR1C3P42330 323 aa16.58■□□□□ 0.24
PSPC1-201ENST00000338910 DNASE1L1P49184 302 aa16.58■□□□□ 0.24
PSPC1-201ENST00000338910 RIDAP52758 137 aaKnown RBP16.58■□□□□ 0.24
PSPC1-201ENST00000338910 FAM76BQ5HYJ3 339 aa16.58■□□□□ 0.24
PSPC1-201ENST00000338910 MDGA2Q7Z553 956 aa16.58■□□□□ 0.24
PSPC1-201ENST00000338910 SLC22A8Q8TCC7 542 aa16.58■□□□□ 0.24
PSPC1-201ENST00000338910 SULT4A1Q9BR01 284 aa16.58■□□□□ 0.24
PSPC1-201ENST00000338910 DCAF16Q9NXF7 216 aa16.58■□□□□ 0.24
PSPC1-201ENST00000338910 LRP12Q9Y561 859 aa16.58■□□□□ 0.24
PSPC1-201ENST00000338910 LNP1A1A4G5 178 aa16.57■□□□□ 0.24
PSPC1-201ENST00000338910 GATCO43716 136 aaKnown RBP16.57■□□□□ 0.24
PSPC1-201ENST00000338910 MED6O75586 246 aa16.57■□□□□ 0.24
PSPC1-201ENST00000338910 OPN1LWP04000 364 aa16.57■□□□□ 0.24
PSPC1-201ENST00000338910 IFNA6P05013 189 aa16.57■□□□□ 0.24
PSPC1-201ENST00000338910 CELA2AP08217 269 aa16.57■□□□□ 0.24
PSPC1-201ENST00000338910 CTLA4P16410 223 aa16.57■□□□□ 0.24
PSPC1-201ENST00000338910 TBPP20226 339 aa16.57■□□□□ 0.24
PSPC1-201ENST00000338910 AKIRIN2Q53H80 203 aa16.57■□□□□ 0.24
PSPC1-201ENST00000338910 TMEM128Q5BJH2 165 aa16.57■□□□□ 0.24
PSPC1-201ENST00000338910 KCTD18Q6PI47 426 aaPredicted RBP16.57■□□□□ 0.24
PSPC1-201ENST00000338910 CHST4Q8NCG5 386 aa16.57■□□□□ 0.24
PSPC1-201ENST00000338910 ZNF248Q8NDW4 579 aa16.57■□□□□ 0.24
PSPC1-201ENST00000338910 OR13C3Q8NGS6 347 aa16.57■□□□□ 0.24
PSPC1-201ENST00000338910 KIRREL1Q96J84 757 aa16.57■□□□□ 0.24
PSPC1-201ENST00000338910 OR5B2Q96R09 309 aa16.57■□□□□ 0.24
PSPC1-201ENST00000338910 HHLA2Q9UM44 414 aa16.57■□□□□ 0.24
PSPC1-201ENST00000338910 MS4A18H0YCH9 400 aa16.57■□□□□ 0.24
PSPC1-201ENST00000338910 AGPAT2O15120 278 aa16.57■□□□□ 0.24
PSPC1-201ENST00000338910 PMELP40967 661 aa16.57■□□□□ 0.24
PSPC1-201ENST00000338910 APOBEC1P41238 236 aaKnown RBP16.57■□□□□ 0.24
PSPC1-201ENST00000338910 UNC119Q13432 240 aa16.57■□□□□ 0.24
PSPC1-201ENST00000338910 MS4A18Q3C1V0 323 aa16.57■□□□□ 0.24
PSPC1-201ENST00000338910 NKAIN3Q8N8D7 197 aa16.57■□□□□ 0.24
PSPC1-201ENST00000338910 RAB18Q9NP72 206 aa16.57■□□□□ 0.24
PSPC1-201ENST00000338910 POMT1Q9Y6A1 747 aa16.57■□□□□ 0.24
PSPC1-201ENST00000338910 EFNA2O43921 213 aa16.56■□□□□ 0.24
PSPC1-201ENST00000338910 ADAP1O75689 374 aa16.56■□□□□ 0.24
PSPC1-201ENST00000338910 CSTBP04080 98 aaKnown RBP16.56■□□□□ 0.24
PSPC1-201ENST00000338910 SERPINA5P05154 406 aa16.56■□□□□ 0.24
PSPC1-201ENST00000338910 NME2P22392 152 aa16.56■□□□□ 0.24
PSPC1-201ENST00000338910 ACP1P24666 158 aa16.56■□□□□ 0.24
PSPC1-201ENST00000338910 SULT1A2P50226 295 aa16.56■□□□□ 0.24
PSPC1-201ENST00000338910 DVL1P1P54792 670 aaPredicted RBP16.56■□□□□ 0.24
PSPC1-201ENST00000338910 EIF5AL1Q6IS14 154 aaKnown RBP16.56■□□□□ 0.24
PSPC1-201ENST00000338910 FAM46BQ96A09 425 aa16.56■□□□□ 0.24
PSPC1-201ENST00000338910 AKR1E2Q96JD6 320 aa16.56■□□□□ 0.24
PSPC1-201ENST00000338910 RASL10BQ96S79 203 aa16.56■□□□□ 0.24
PSPC1-201ENST00000338910 ABHD6Q9BV23 337 aa16.56■□□□□ 0.24
PSPC1-201ENST00000338910 RPS10P5Q9NQ39 176 aa16.56■□□□□ 0.24
PSPC1-201ENST00000338910 TRBV23-1A0A0A0MS06 115 aa16.56■□□□□ 0.24
PSPC1-201ENST00000338910 LOC107986453A0A1B0GWG9 222 aa16.56■□□□□ 0.24
PSPC1-201ENST00000338910 SRSF10O75494 262 aaKnown RBP16.56■□□□□ 0.24
PSPC1-201ENST00000338910 PMP2P02689 132 aa16.56■□□□□ 0.24
PSPC1-201ENST00000338910 OR8U8P0C7N1 319 aa16.56■□□□□ 0.24
PSPC1-201ENST00000338910 PTGDSP41222 190 aa16.56■□□□□ 0.24
PSPC1-201ENST00000338910 FOXK1P85037 733 aa16.56■□□□□ 0.24
PSPC1-201ENST00000338910 DBX2Q6ZNG2 339 aa16.56■□□□□ 0.24
PSPC1-201ENST00000338910 TMEM230Q96A57 120 aa16.56■□□□□ 0.24
PSPC1-201ENST00000338910 TAAR9Q96RI9 348 aa16.56■□□□□ 0.24
PSPC1-201ENST00000338910 CNTD2Q9H8S5 307 aa16.56■□□□□ 0.24
PSPC1-201ENST00000338910 PTRH2Q9Y3E5 179 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms