RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 ZNF85Q03923 595 aa12.72□□□□□ -0.37
PRKN-201ENST00000338468 SNCBQ16143 134 aa12.72□□□□□ -0.37
PRKN-201ENST00000338468 OCLNQ16625 522 aa12.72□□□□□ -0.37
PRKN-201ENST00000338468 FAM76BQ5HYJ3 339 aa12.72□□□□□ -0.37
PRKN-201ENST00000338468 ZBTB49Q6ZSB9 765 aa12.72□□□□□ -0.37
PRKN-201ENST00000338468 Q6ZSR3 168 aa12.72□□□□□ -0.37
PRKN-201ENST00000338468 C1QL2Q7Z5L3 287 aa12.72□□□□□ -0.37
PRKN-201ENST00000338468 FAM90A1Q86YD7 464 aa12.72□□□□□ -0.37
PRKN-201ENST00000338468 ELMOD2Q8IZ81 293 aa12.72□□□□□ -0.37
PRKN-201ENST00000338468 FTMTQ8N4E7 242 aa12.72□□□□□ -0.37
PRKN-201ENST00000338468 OR10H4Q8NGA5 316 aa12.72□□□□□ -0.37
PRKN-201ENST00000338468 PIGCQ92535 297 aa12.72□□□□□ -0.37
PRKN-201ENST00000338468 RFKQ969G6 155 aa12.72□□□□□ -0.37
PRKN-201ENST00000338468 FAM71F1Q96KD3 344 aaPredicted RBP12.72□□□□□ -0.37
PRKN-201ENST00000338468 SSBP3Q9BWW4 388 aaPredicted RBP12.72□□□□□ -0.37
PRKN-201ENST00000338468 C7orf69Q9H7B7 122 aa12.72□□□□□ -0.37
PRKN-201ENST00000338468 RNPEPL1Q9HAU8 725 aa12.72□□□□□ -0.37
PRKN-201ENST00000338468 IMPAD1Q9NX62 359 aa12.72□□□□□ -0.37
PRKN-201ENST00000338468 OR52A1Q9UKL2 312 aa12.72□□□□□ -0.37
PRKN-201ENST00000338468 ZNF816-ZNF321PA0A0X1KG74 233 aa12.71□□□□□ -0.37
PRKN-201ENST00000338468 OOEPA6NGQ2 149 aa12.71□□□□□ -0.37
PRKN-201ENST00000338468 ANXA2P2A6NMY6 339 aa12.71□□□□□ -0.37
PRKN-201ENST00000338468 WIPF1O43516 503 aa12.71□□□□□ -0.37
PRKN-201ENST00000338468 BAG2O95816 211 aa12.71□□□□□ -0.37
PRKN-201ENST00000338468 ATP6V1B1P15313 513 aa12.71□□□□□ -0.37
PRKN-201ENST00000338468 CFHR2P36980 270 aa12.71□□□□□ -0.37
PRKN-201ENST00000338468 MAP2K3P46734 347 aa12.71□□□□□ -0.37
PRKN-201ENST00000338468 MTNR1AP48039 350 aa12.71□□□□□ -0.37
PRKN-201ENST00000338468 PITPNBP48739 271 aa12.71□□□□□ -0.37
PRKN-201ENST00000338468 ISL1P61371 349 aa12.71□□□□□ -0.37
PRKN-201ENST00000338468 ELF3P78545 371 aaPredicted RBP12.71□□□□□ -0.37
PRKN-201ENST00000338468 DMRTC1Q5HYR2 192 aa12.71□□□□□ -0.37
PRKN-201ENST00000338468 TEX36Q5VZQ5 186 aa12.71□□□□□ -0.37
PRKN-201ENST00000338468 WDR25Q64LD2 544 aaPredicted RBP12.71□□□□□ -0.37
PRKN-201ENST00000338468 SEMA6DQ8NFY4 1073 aa12.71□□□□□ -0.37
PRKN-201ENST00000338468 OR8B3Q8NGG8 313 aa12.71□□□□□ -0.37
PRKN-201ENST00000338468 LRRC29Q8WV35 223 aa12.71□□□□□ -0.37
PRKN-201ENST00000338468 RPL3LQ92901 407 aaKnown RBP12.71□□□□□ -0.37
PRKN-201ENST00000338468 SEH1LQ96EE3 360 aa12.71□□□□□ -0.37
PRKN-201ENST00000338468 RNFT2Q96EX2 444 aa12.71□□□□□ -0.37
PRKN-201ENST00000338468 OR8B2Q96RD0 313 aa12.71□□□□□ -0.37
PRKN-201ENST00000338468 MICU1Q9BPX6 476 aa12.71□□□□□ -0.37
PRKN-201ENST00000338468 RTL8AQ9BWD3 113 aa12.71□□□□□ -0.37
PRKN-201ENST00000338468 MOB1AQ9H8S9 216 aa12.71□□□□□ -0.37
PRKN-201ENST00000338468 METRNQ9UJH8 293 aa12.71□□□□□ -0.37
PRKN-201ENST00000338468 SLC22A13Q9Y226 551 aa12.71□□□□□ -0.37
PRKN-201ENST00000338468 IGHV3OR15-7A0A075B7D8 119 aa12.7□□□□□ -0.38
PRKN-201ENST00000338468 hCG_1807616A0A1W2PRN6 198 aa12.7□□□□□ -0.38
PRKN-201ENST00000338468 METTL15A6NJ78 407 aa12.7□□□□□ -0.38
PRKN-201ENST00000338468 CDIPTO14735 213 aa12.7□□□□□ -0.38
PRKN-201ENST00000338468 SULT1C4O75897 302 aa12.7□□□□□ -0.38
PRKN-201ENST00000338468 DHRS3O75911 302 aa12.7□□□□□ -0.38
PRKN-201ENST00000338468 RPP14O95059 124 aaKnown RBP12.7□□□□□ -0.38
PRKN-201ENST00000338468 KRT8P05787 483 aa12.7□□□□□ -0.38
PRKN-201ENST00000338468 FAHP16930 419 aa12.7□□□□□ -0.38
PRKN-201ENST00000338468 PAX8Q06710 450 aa12.7□□□□□ -0.38
PRKN-201ENST00000338468 RIPPLY1Q0D2K3 151 aa12.7□□□□□ -0.38
PRKN-201ENST00000338468 BCL2L15Q5TBC7 163 aa12.7□□□□□ -0.38
PRKN-201ENST00000338468 CATSPERDQ86XM0 798 aa12.7□□□□□ -0.38
PRKN-201ENST00000338468 ZDHHC23Q8IYP9 409 aa12.7□□□□□ -0.38
PRKN-201ENST00000338468 ENTHD1Q8IYW4 607 aa12.7□□□□□ -0.38
PRKN-201ENST00000338468 YIPF7Q8N8F6 280 aa12.7□□□□□ -0.38
PRKN-201ENST00000338468 OR14K1Q8NGZ2 314 aa12.7□□□□□ -0.38
PRKN-201ENST00000338468 RHOXF1Q8NHV9 184 aa12.7□□□□□ -0.38
PRKN-201ENST00000338468 RORBQ92753 470 aa12.7□□□□□ -0.38
PRKN-201ENST00000338468 ITFG2Q969R8 447 aa12.7□□□□□ -0.38
PRKN-201ENST00000338468 RNF170Q96K19 258 aa12.7□□□□□ -0.38
PRKN-201ENST00000338468 ABCB9Q9NP78 766 aa12.7□□□□□ -0.38
PRKN-201ENST00000338468 FAM118AQ9NWS6 357 aa12.7□□□□□ -0.38
PRKN-201ENST00000338468 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.7□□□□□ -0.38
PRKN-201ENST00000338468 GTF2A1LQ9UNN4 478 aa12.7□□□□□ -0.38
PRKN-201ENST00000338468 GMPPBQ9Y5P6 360 aa12.7□□□□□ -0.38
PRKN-201ENST00000338468 SNX5Q9Y5X3 404 aa12.7□□□□□ -0.38
PRKN-201ENST00000338468 V9GYS6 101 aa12.7□□□□□ -0.38
PRKN-201ENST00000338468 TRAV38-1A0A0B4J264 116 aa12.69□□□□□ -0.38
PRKN-201ENST00000338468 LOC100130705A0A1B0GUX0 176 aa12.69□□□□□ -0.38
PRKN-201ENST00000338468 TMEM210A6NLX4 147 aa12.69□□□□□ -0.38
PRKN-201ENST00000338468 SRRM5B3KS81 715 aa12.69□□□□□ -0.38
PRKN-201ENST00000338468 P2RY10O00398 339 aa12.69□□□□□ -0.38
PRKN-201ENST00000338468 SLC16A6O15403 523 aa12.69□□□□□ -0.38
PRKN-201ENST00000338468 GYPAP02724 150 aa12.69□□□□□ -0.38
PRKN-201ENST00000338468 AMY2BP19961 511 aa12.69□□□□□ -0.38
PRKN-201ENST00000338468 CCL1P22362 96 aa12.69□□□□□ -0.38
PRKN-201ENST00000338468 ATP6V1E1P36543 226 aa12.69□□□□□ -0.38
PRKN-201ENST00000338468 GPM6AP51674 278 aa12.69□□□□□ -0.38
PRKN-201ENST00000338468 GNB2P62879 340 aa12.69□□□□□ -0.38
PRKN-201ENST00000338468 CEACAM21Q3KPI0 293 aa12.69□□□□□ -0.38
PRKN-201ENST00000338468 TP53I3Q53FA7 332 aa12.69□□□□□ -0.38
PRKN-201ENST00000338468 KLF17Q5JT82 389 aaPredicted RBP12.69□□□□□ -0.38
PRKN-201ENST00000338468 CEP78Q5JTW2 689 aa12.69□□□□□ -0.38
PRKN-201ENST00000338468 ZBTB37Q5TC79 503 aa12.69□□□□□ -0.38
PRKN-201ENST00000338468 MEDAGQ5VYS4 303 aa12.69□□□□□ -0.38
PRKN-201ENST00000338468 TMEM42Q69YG0 159 aa12.69□□□□□ -0.38
PRKN-201ENST00000338468 NLRC3Q7RTR2 1065 aa12.69□□□□□ -0.38
PRKN-201ENST00000338468 COMMD2Q86X83 199 aa12.69□□□□□ -0.38
PRKN-201ENST00000338468 PRSS35Q8N3Z0 413 aa12.69□□□□□ -0.38
PRKN-201ENST00000338468 SCCPDHQ8NBX0 429 aa12.69□□□□□ -0.38
PRKN-201ENST00000338468 RAB40AQ8WXH6 277 aa12.69□□□□□ -0.38
PRKN-201ENST00000338468 OR51I2Q9H344 312 aa12.69□□□□□ -0.38
PRKN-201ENST00000338468 SMURF1Q9HCE7 757 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms