RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 UQCC3Q6UW78 93 aa12.31□□□□□ -0.44
RTN4-202ENST00000337526 FAM185AQ8N0U4 392 aa12.31□□□□□ -0.44
RTN4-202ENST00000337526 OR8U1Q8NH10 309 aa12.31□□□□□ -0.44
RTN4-202ENST00000337526 MITD1Q8WV92 249 aa12.31□□□□□ -0.44
RTN4-202ENST00000337526 ZNF707Q96C28 371 aaPredicted RBP12.31□□□□□ -0.44
RTN4-202ENST00000337526 SHARPINQ9H0F6 387 aa12.31□□□□□ -0.44
RTN4-202ENST00000337526 UBE2ZQ9H832 354 aaPredicted RBP12.31□□□□□ -0.44
RTN4-202ENST00000337526 LIN7CQ9NUP9 197 aaKnown RBP12.31□□□□□ -0.44
RTN4-202ENST00000337526 KIAA1217Q5T5P2 1943 aa12.31□□□□□ -0.44
RTN4-202ENST00000337526 RBPJQ06330 500 aa12.31□□□□□ -0.44
RTN4-202ENST00000337526 SLC25A30Q5SVS4 291 aa12.31□□□□□ -0.44
RTN4-202ENST00000337526 SPEM1Q8N4L4 309 aa12.31□□□□□ -0.44
RTN4-202ENST00000337526 ZNF75AQ96N20 296 aa12.31□□□□□ -0.44
RTN4-202ENST00000337526 CT45A6P0DMU7 189 aa12.31□□□□□ -0.44
RTN4-202ENST00000337526 CT45A5P0DMU8 189 aa12.31□□□□□ -0.44
RTN4-202ENST00000337526 CT45A7P0DMV0 189 aa12.31□□□□□ -0.44
RTN4-202ENST00000337526 CT45A8P0DMV1 189 aa12.31□□□□□ -0.44
RTN4-202ENST00000337526 CT45A9P0DMV2 189 aa12.31□□□□□ -0.44
RTN4-202ENST00000337526 DHODHQ02127 395 aa12.31□□□□□ -0.44
RTN4-202ENST00000337526 MPPED2Q15777 294 aa12.31□□□□□ -0.44
RTN4-202ENST00000337526 CT45A2Q5DJT8 189 aa12.31□□□□□ -0.44
RTN4-202ENST00000337526 CT45A1Q5HYN5 189 aa12.31□□□□□ -0.44
RTN4-202ENST00000337526 CT45A3Q8NHU0 189 aa12.31□□□□□ -0.44
RTN4-202ENST00000337526 TVP23CQ96ET8 276 aa12.31□□□□□ -0.44
RTN4-202ENST00000337526 KLF13Q9Y2Y9 288 aaPredicted RBP12.31□□□□□ -0.44
RTN4-202ENST00000337526 OGG1O15527 345 aa12.31□□□□□ -0.44
RTN4-202ENST00000337526 CST4P01036 141 aa12.31□□□□□ -0.44
RTN4-202ENST00000337526 C4orf17Q53FE4 359 aa12.31□□□□□ -0.44
RTN4-202ENST00000337526 TMPRSS7Q7RTY8 843 aa12.31□□□□□ -0.44
RTN4-202ENST00000337526 NECAP1Q8NC96 275 aa12.31□□□□□ -0.44
RTN4-202ENST00000337526 FOXB1Q99853 325 aa12.31□□□□□ -0.44
RTN4-202ENST00000337526 MRM2Q9UI43 246 aaKnown RBP12.31□□□□□ -0.44
RTN4-202ENST00000337526 FAM157BP0CG42 384 aa12.3□□□□□ -0.44
RTN4-202ENST00000337526 NDUFB7P17568 137 aa12.3□□□□□ -0.44
RTN4-202ENST00000337526 AGFG1P52594 562 aaKnown RBP12.3□□□□□ -0.44
RTN4-202ENST00000337526 ZNF79Q15937 498 aa12.3□□□□□ -0.44
RTN4-202ENST00000337526 GPBAR1Q8TDU6 330 aa12.3□□□□□ -0.44
RTN4-202ENST00000337526 CCDC74BQ96LY2 380 aa12.3□□□□□ -0.44
RTN4-202ENST00000337526 PLA2G2FQ9BZM2 168 aa12.3□□□□□ -0.44
RTN4-202ENST00000337526 ACTR3CQ9C0K3 210 aaPredicted RBP12.3□□□□□ -0.44
RTN4-202ENST00000337526 PSENENQ9NZ42 101 aa12.3□□□□□ -0.44
RTN4-202ENST00000337526 MPC2O95563 127 aa12.3□□□□□ -0.44
RTN4-202ENST00000337526 SELEP16581 610 aa12.3□□□□□ -0.44
RTN4-202ENST00000337526 GLRA1P23415 457 aa12.3□□□□□ -0.44
RTN4-202ENST00000337526 PTGFRP43088 359 aa12.3□□□□□ -0.44
RTN4-202ENST00000337526 PPP1CAP62136 330 aa12.3□□□□□ -0.44
RTN4-202ENST00000337526 CKAP5Q14008 2032 aa12.3□□□□□ -0.44
RTN4-202ENST00000337526 NARFLQ9H6Q4 476 aa12.3□□□□□ -0.44
RTN4-202ENST00000337526 ZNF275Q9NSD4 429 aaPredicted RBP12.3□□□□□ -0.44
RTN4-202ENST00000337526 CYB5R1Q9UHQ9 305 aa12.3□□□□□ -0.44
RTN4-202ENST00000337526 SPTBP11277 2137 aa12.3□□□□□ -0.44
RTN4-202ENST00000337526 PAPPAQ13219 1627 aa12.3□□□□□ -0.44
RTN4-202ENST00000337526 PIAS2O75928 621 aa12.3□□□□□ -0.44
RTN4-202ENST00000337526 ZIC2O95409 532 aaPredicted RBP12.3□□□□□ -0.44
RTN4-202ENST00000337526 CSF2RBP32927 897 aa12.3□□□□□ -0.44
RTN4-202ENST00000337526 SLC37A1P57057 533 aa12.3□□□□□ -0.44
RTN4-202ENST00000337526 PJVKQ0ZLH3 352 aa12.3□□□□□ -0.44
RTN4-202ENST00000337526 CHST6Q9GZX3 395 aa12.3□□□□□ -0.44
RTN4-202ENST00000337526 FLRT3Q9NZU0 649 aa12.3□□□□□ -0.44
RTN4-202ENST00000337526 ZNF230Q9UIE0 474 aaPredicted RBP12.3□□□□□ -0.44
RTN4-202ENST00000337526 FIGNL2A6NMB9 653 aa12.3□□□□□ -0.44
RTN4-202ENST00000337526 HMSDA8MTL9 139 aa12.3□□□□□ -0.44
RTN4-202ENST00000337526 COX5AP20674 150 aa12.3□□□□□ -0.44
RTN4-202ENST00000337526 GPR12P47775 334 aa12.3□□□□□ -0.44
RTN4-202ENST00000337526 DSCR4P56555 118 aaPredicted RBP12.3□□□□□ -0.44
RTN4-202ENST00000337526 PSG6Q00889 435 aa12.3□□□□□ -0.44
RTN4-202ENST00000337526 OR10G3Q8NGC4 313 aa12.3□□□□□ -0.44
RTN4-202ENST00000337526 OR1F12Q8NHA8 337 aa12.3□□□□□ -0.44
RTN4-202ENST00000337526 CMTM2Q8TAZ6 248 aa12.3□□□□□ -0.44
RTN4-202ENST00000337526 EXTL1Q92935 676 aa12.3□□□□□ -0.44
RTN4-202ENST00000337526 GNRHR2Q96P88 292 aa12.3□□□□□ -0.44
RTN4-202ENST00000337526 RAB18Q9NP72 206 aa12.3□□□□□ -0.44
RTN4-202ENST00000337526 ASXL3Q9C0F0 2248 aa12.3□□□□□ -0.44
RTN4-202ENST00000337526 C9orf170A2RU37 121 aa12.29□□□□□ -0.44
RTN4-202ENST00000337526 LRRC30A6NM36 301 aa12.29□□□□□ -0.44
RTN4-202ENST00000337526 C2CD4DB7Z1M9 353 aa12.29□□□□□ -0.44
RTN4-202ENST00000337526 C1QCP02747 245 aa12.29□□□□□ -0.44
RTN4-202ENST00000337526 CLEC12BQ2HXU8 276 aa12.29□□□□□ -0.44
RTN4-202ENST00000337526 RNF212Q495C1 297 aa12.29□□□□□ -0.44
RTN4-202ENST00000337526 SCCPDHQ8NBX0 429 aa12.29□□□□□ -0.44
RTN4-202ENST00000337526 DEFB108BQ8NET1 73 aa12.29□□□□□ -0.44
RTN4-202ENST00000337526 OR2V1Q8NHB1 315 aa12.29□□□□□ -0.44
RTN4-202ENST00000337526 ZC3HAV1LQ96H79 300 aaKnown RBP12.29□□□□□ -0.44
RTN4-202ENST00000337526 TXN2Q99757 166 aa12.29□□□□□ -0.44
RTN4-202ENST00000337526 RGS13O14921 159 aa12.29□□□□□ -0.44
RTN4-202ENST00000337526 SELENOPP49908 381 aa12.29□□□□□ -0.44
RTN4-202ENST00000337526 GUK1Q16774 197 aa12.29□□□□□ -0.44
RTN4-202ENST00000337526 SFTPA1Q8IWL2 248 aa12.29□□□□□ -0.44
RTN4-202ENST00000337526 DECR2Q9NUI1 292 aa12.29□□□□□ -0.44
RTN4-202ENST00000337526 RCL1Q9Y2P8 373 aaKnown RBP12.29□□□□□ -0.44
RTN4-202ENST00000337526 DOCK1Q14185 1865 aa12.29□□□□□ -0.44
RTN4-202ENST00000337526 COL4A1P02462 1669 aa12.29□□□□□ -0.44
RTN4-202ENST00000337526 GPR31O00270 319 aa12.29□□□□□ -0.44
RTN4-202ENST00000337526 TO15178 435 aa12.29□□□□□ -0.44
RTN4-202ENST00000337526 MPZL1O95297 269 aa12.29□□□□□ -0.44
RTN4-202ENST00000337526 DUS4LO95620 317 aaKnown RBP12.29□□□□□ -0.44
RTN4-202ENST00000337526 PMP22Q01453 160 aa12.29□□□□□ -0.44
RTN4-202ENST00000337526 RAB32Q13637 225 aa12.29□□□□□ -0.44
RTN4-202ENST00000337526 DRAM2Q6UX65 266 aa12.29□□□□□ -0.44
RTN4-202ENST00000337526 C16orf47Q6ZP98 133 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms