RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 CASRP41180 1078 aa14.66□□□□□ -0.06
CDC42EP4-201ENST00000335793 ZNF260Q3ZCT1 412 aa14.66□□□□□ -0.06
CDC42EP4-201ENST00000335793 UBAC2Q8NBM4 344 aa14.66□□□□□ -0.06
CDC42EP4-201ENST00000335793 OR4K17Q8NGC6 315 aa14.66□□□□□ -0.06
CDC42EP4-201ENST00000335793 OR2I1PQ8NGU4 316 aa14.66□□□□□ -0.06
CDC42EP4-201ENST00000335793 STT3BQ8TCJ2 826 aa14.66□□□□□ -0.06
CDC42EP4-201ENST00000335793 TMED6Q8WW62 240 aa14.66□□□□□ -0.06
CDC42EP4-201ENST00000335793 OR5B2Q96R09 309 aa14.66□□□□□ -0.06
CDC42EP4-201ENST00000335793 MRPS28Q9Y2Q9 187 aaKnown RBP14.66□□□□□ -0.06
CDC42EP4-201ENST00000335793 THADAQ6YHU6 1953 aa14.66□□□□□ -0.06
CDC42EP4-201ENST00000335793 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.65□□□□□ -0.06
CDC42EP4-201ENST00000335793 A0A1W2PP11 408 aa14.65□□□□□ -0.06
CDC42EP4-201ENST00000335793 LOC390937A0A1W2PQ73 354 aa14.65□□□□□ -0.06
CDC42EP4-201ENST00000335793 A0A1W2PQD3 144 aa14.65□□□□□ -0.06
CDC42EP4-201ENST00000335793 SULT2B1O00204 365 aa14.65□□□□□ -0.06
CDC42EP4-201ENST00000335793 BPIFB3P59826 476 aa14.65□□□□□ -0.06
CDC42EP4-201ENST00000335793 SLC25A42Q86VD7 318 aa14.65□□□□□ -0.06
CDC42EP4-201ENST00000335793 ZNF561Q8N587 486 aa14.65□□□□□ -0.06
CDC42EP4-201ENST00000335793 KDF1Q8NAX2 398 aaPredicted RBP14.65□□□□□ -0.06
CDC42EP4-201ENST00000335793 ASB10Q8WXI3 467 aa14.65□□□□□ -0.06
CDC42EP4-201ENST00000335793 S100A13Q99584 98 aa14.65□□□□□ -0.06
CDC42EP4-201ENST00000335793 CHST11Q9NPF2 352 aa14.65□□□□□ -0.06
CDC42EP4-201ENST00000335793 IGKV3D-11A0A0A0MRZ8 115 aa14.65□□□□□ -0.06
CDC42EP4-201ENST00000335793 A0A1B0GX78 115 aa14.65□□□□□ -0.06
CDC42EP4-201ENST00000335793 NUDT21O43809 227 aaKnown RBP14.65□□□□□ -0.06
CDC42EP4-201ENST00000335793 NPIPB7O75200 414 aa14.65□□□□□ -0.06
CDC42EP4-201ENST00000335793 KNG1P01042 644 aa14.65□□□□□ -0.06
CDC42EP4-201ENST00000335793 TTRP02766 147 aa14.65□□□□□ -0.06
CDC42EP4-201ENST00000335793 SFTPBP07988 381 aa14.65□□□□□ -0.06
CDC42EP4-201ENST00000335793 CD27P26842 260 aa14.65□□□□□ -0.06
CDC42EP4-201ENST00000335793 PSMB6P28072 239 aa14.65□□□□□ -0.06
CDC42EP4-201ENST00000335793 ST7LQ8TDW4 575 aa14.65□□□□□ -0.06
CDC42EP4-201ENST00000335793 UCK1Q9HA47 277 aa14.65□□□□□ -0.06
CDC42EP4-201ENST00000335793 UQCC1Q9NVA1 299 aa14.65□□□□□ -0.06
CDC42EP4-201ENST00000335793 A0A0A6YYH2 397 aa14.65□□□□□ -0.06
CDC42EP4-201ENST00000335793 A6NJ64 397 aa14.65□□□□□ -0.06
CDC42EP4-201ENST00000335793 FSTP19883 344 aa14.65□□□□□ -0.06
CDC42EP4-201ENST00000335793 AMY2BP19961 511 aa14.65□□□□□ -0.06
CDC42EP4-201ENST00000335793 ZBTB25P24278 435 aa14.65□□□□□ -0.06
CDC42EP4-201ENST00000335793 DDTP30046 118 aa14.65□□□□□ -0.06
CDC42EP4-201ENST00000335793 UNC119Q13432 240 aa14.65□□□□□ -0.06
CDC42EP4-201ENST00000335793 UEVLDQ8IX04 471 aa14.65□□□□□ -0.06
CDC42EP4-201ENST00000335793 MVB12AQ96EY5 273 aa14.65□□□□□ -0.06
CDC42EP4-201ENST00000335793 IGHV1OR15-9A0A0B4J2B8 117 aa14.64□□□□□ -0.07
CDC42EP4-201ENST00000335793 TRBV11-1A0A0K0K1C0 115 aa14.64□□□□□ -0.07
CDC42EP4-201ENST00000335793 ZNF726A6NNF4 738 aa14.64□□□□□ -0.07
CDC42EP4-201ENST00000335793 LMO7DNF2Z398 122 aa14.64□□□□□ -0.07
CDC42EP4-201ENST00000335793 ADAP1O75689 374 aa14.64□□□□□ -0.07
CDC42EP4-201ENST00000335793 HOXB5P09067 269 aa14.64□□□□□ -0.07
CDC42EP4-201ENST00000335793 FAM57BQ71RH2 274 aa14.64□□□□□ -0.07
CDC42EP4-201ENST00000335793 RNF144BQ7Z419 303 aa14.64□□□□□ -0.07
CDC42EP4-201ENST00000335793 NAXEQ8NCW5 288 aa14.64□□□□□ -0.07
CDC42EP4-201ENST00000335793 EDAQ92838 391 aa14.64□□□□□ -0.07
CDC42EP4-201ENST00000335793 ACKR4Q9NPB9 350 aa14.64□□□□□ -0.07
CDC42EP4-201ENST00000335793 METTL1Q9UBP6 276 aaKnown RBP14.64□□□□□ -0.07
CDC42EP4-201ENST00000335793 RALGAPA1Q6GYQ0 2036 aa14.64□□□□□ -0.07
CDC42EP4-201ENST00000335793 CPED1A4D0V7 1026 aa14.64□□□□□ -0.07
CDC42EP4-201ENST00000335793 SOCS1O15524 211 aa14.64□□□□□ -0.07
CDC42EP4-201ENST00000335793 MBTPS2O43462 519 aa14.64□□□□□ -0.07
CDC42EP4-201ENST00000335793 DCDP81605 110 aaKnown RBP14.64□□□□□ -0.07
CDC42EP4-201ENST00000335793 INPP5JQ15735 1006 aaPredicted RBP14.64□□□□□ -0.07
CDC42EP4-201ENST00000335793 RAB30Q15771 203 aa14.64□□□□□ -0.07
CDC42EP4-201ENST00000335793 ZNF585AQ6P3V2 769 aa14.64□□□□□ -0.07
CDC42EP4-201ENST00000335793 TMEM104Q8NE00 496 aa14.64□□□□□ -0.07
CDC42EP4-201ENST00000335793 ROBO4Q8WZ75 1007 aa14.64□□□□□ -0.07
CDC42EP4-201ENST00000335793 TMEM59Q9BXS4 323 aa14.64□□□□□ -0.07
CDC42EP4-201ENST00000335793 GPR84Q9NQS5 396 aa14.64□□□□□ -0.07
CDC42EP4-201ENST00000335793 SMCO4Q9NRQ5 59 aa14.64□□□□□ -0.07
CDC42EP4-201ENST00000335793 SERINC1Q9NRX5 453 aa14.64□□□□□ -0.07
CDC42EP4-201ENST00000335793 ZNF217O75362 1048 aa14.63□□□□□ -0.07
CDC42EP4-201ENST00000335793 BCKDHBP21953 392 aa14.63□□□□□ -0.07
CDC42EP4-201ENST00000335793 PTCRAQ6ISU1 281 aaPredicted RBP14.63□□□□□ -0.07
CDC42EP4-201ENST00000335793 ZNF813Q6ZN06 617 aa14.63□□□□□ -0.07
CDC42EP4-201ENST00000335793 WDFY1Q8IWB7 410 aa14.63□□□□□ -0.07
CDC42EP4-201ENST00000335793 PAQR4Q8N4S7 273 aaPredicted RBP14.63□□□□□ -0.07
CDC42EP4-201ENST00000335793 IGHV1OR21-1A0A087WYE8 117 aa14.63□□□□□ -0.07
CDC42EP4-201ENST00000335793 RNF222A6NCQ9 220 aa14.63□□□□□ -0.07
CDC42EP4-201ENST00000335793 ZNF878C9JN71 531 aa14.63□□□□□ -0.07
CDC42EP4-201ENST00000335793 F5H5K5 113 aa14.63□□□□□ -0.07
CDC42EP4-201ENST00000335793 RER1O15258 196 aa14.63□□□□□ -0.07
CDC42EP4-201ENST00000335793 ZNF354AO60765 605 aaPredicted RBP14.63□□□□□ -0.07
CDC42EP4-201ENST00000335793 CD74P04233 296 aa14.63□□□□□ -0.07
CDC42EP4-201ENST00000335793 HTR5AP47898 357 aa14.63□□□□□ -0.07
CDC42EP4-201ENST00000335793 NKAPLQ5M9Q1 402 aa14.63□□□□□ -0.07
CDC42EP4-201ENST00000335793 C1orf100Q5SVJ3 147 aa14.63□□□□□ -0.07
CDC42EP4-201ENST00000335793 SKA3Q8IX90 412 aa14.63□□□□□ -0.07
CDC42EP4-201ENST00000335793 OR5H2Q8NGV7 314 aa14.63□□□□□ -0.07
CDC42EP4-201ENST00000335793 MITD1Q8WV92 249 aa14.63□□□□□ -0.07
CDC42EP4-201ENST00000335793 AQP3Q92482 292 aa14.63□□□□□ -0.07
CDC42EP4-201ENST00000335793 FAM117AQ9C073 453 aa14.63□□□□□ -0.07
CDC42EP4-201ENST00000335793 PARP12Q9H0J9 701 aaKnown RBP14.63□□□□□ -0.07
CDC42EP4-201ENST00000335793 ZNF701Q9NV72 531 aaPredicted RBP14.63□□□□□ -0.07
CDC42EP4-201ENST00000335793 SLC5A6Q9Y289 635 aa14.63□□□□□ -0.07
CDC42EP4-201ENST00000335793 AP4M1O00189 453 aa14.63□□□□□ -0.07
CDC42EP4-201ENST00000335793 CYTIPO60759 359 aa14.63□□□□□ -0.07
CDC42EP4-201ENST00000335793 CD8AP01732 235 aa14.63□□□□□ -0.07
CDC42EP4-201ENST00000335793 MMP16P51512 607 aa14.63□□□□□ -0.07
CDC42EP4-201ENST00000335793 CLDN6P56747 220 aa14.63□□□□□ -0.07
CDC42EP4-201ENST00000335793 OR51T1Q8NGJ9 327 aa14.63□□□□□ -0.07
CDC42EP4-201ENST00000335793 RNF133Q8WVZ7 376 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms