RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 PDGFBP01127 241 aaPredicted RBP12.3□□□□□ -0.44
SF1-202ENST00000334944 RAB6AP20340 208 aa12.3□□□□□ -0.44
SF1-202ENST00000334944 GSK3AP49840 483 aa12.3□□□□□ -0.44
SF1-202ENST00000334944 CXADRP78310 365 aa12.3□□□□□ -0.44
SF1-202ENST00000334944 PPP1R1AQ13522 171 aa12.3□□□□□ -0.44
SF1-202ENST00000334944 MEF2DQ14814 521 aa12.3□□□□□ -0.44
SF1-202ENST00000334944 RSU1Q15404 277 aa12.3□□□□□ -0.44
SF1-202ENST00000334944 NFAM1Q8NET5 270 aaPredicted RBP12.3□□□□□ -0.44
SF1-202ENST00000334944 FAM3DQ96BQ1 224 aa12.3□□□□□ -0.44
SF1-202ENST00000334944 CACFD1Q9UGQ2 172 aa12.3□□□□□ -0.44
SF1-202ENST00000334944 A0A1B0GTI1 187 aa12.3□□□□□ -0.44
SF1-202ENST00000334944 P2RY10O00398 339 aa12.3□□□□□ -0.44
SF1-202ENST00000334944 CTAG2O75638 210 aa12.3□□□□□ -0.44
SF1-202ENST00000334944 ITGB2P05107 769 aa12.3□□□□□ -0.44
SF1-202ENST00000334944 CFIP05156 583 aa12.3□□□□□ -0.44
SF1-202ENST00000334944 CALCBP10092 127 aa12.3□□□□□ -0.44
SF1-202ENST00000334944 SLC2A1P11166 492 aa12.3□□□□□ -0.44
SF1-202ENST00000334944 ZNF823P16415 610 aa12.3□□□□□ -0.44
SF1-202ENST00000334944 AKR1C4P17516 323 aa12.3□□□□□ -0.44
SF1-202ENST00000334944 CDAP32320 146 aa12.3□□□□□ -0.44
SF1-202ENST00000334944 PRSS3P35030 304 aa12.3□□□□□ -0.44
SF1-202ENST00000334944 CAV2P51636 162 aa12.3□□□□□ -0.44
SF1-202ENST00000334944 BIDP55957 195 aa12.3□□□□□ -0.44
SF1-202ENST00000334944 PLPP5Q8NEB5 264 aa12.3□□□□□ -0.44
SF1-202ENST00000334944 CCDC107Q8WV48 283 aa12.3□□□□□ -0.44
SF1-202ENST00000334944 ASB5Q8WWX0 329 aa12.3□□□□□ -0.44
SF1-202ENST00000334944 SLC25A44Q96H78 314 aaPredicted RBP12.3□□□□□ -0.44
SF1-202ENST00000334944 KIRREL1Q96J84 757 aa12.3□□□□□ -0.44
SF1-202ENST00000334944 CST11Q9H112 138 aa12.3□□□□□ -0.44
SF1-202ENST00000334944 SIT1Q9Y3P8 196 aa12.3□□□□□ -0.44
SF1-202ENST00000334944 IGHV5-10-1A0A0J9YXX1 117 aa12.29□□□□□ -0.44
SF1-202ENST00000334944 PATE3B3GLJ2 98 aa12.29□□□□□ -0.44
SF1-202ENST00000334944 OR8U9P0C7N5 309 aa12.29□□□□□ -0.44
SF1-202ENST00000334944 DDTP30046 118 aa12.29□□□□□ -0.44
SF1-202ENST00000334944 GLP1RP43220 463 aa12.29□□□□□ -0.44
SF1-202ENST00000334944 MRPS10P82664 201 aaKnown RBP12.29□□□□□ -0.44
SF1-202ENST00000334944 CDNFQ49AH0 187 aa12.29□□□□□ -0.44
SF1-202ENST00000334944 TMEM225Q6GV28 225 aa12.29□□□□□ -0.44
SF1-202ENST00000334944 OR2A2Q6IF42 318 aa12.29□□□□□ -0.44
SF1-202ENST00000334944 OR8U1Q8NH10 309 aa12.29□□□□□ -0.44
SF1-202ENST00000334944 RNF128Q8TEB7 428 aa12.29□□□□□ -0.44
SF1-202ENST00000334944 NUDCD2Q8WVJ2 157 aa12.29□□□□□ -0.44
SF1-202ENST00000334944 FOXRED1Q96CU9 486 aaPredicted RBP12.29□□□□□ -0.44
SF1-202ENST00000334944 CCDC74BQ96LY2 380 aa12.29□□□□□ -0.44
SF1-202ENST00000334944 METTL7AQ9H8H3 244 aa12.29□□□□□ -0.44
SF1-202ENST00000334944 LPAR3Q9UBY5 353 aa12.29□□□□□ -0.44
SF1-202ENST00000334944 XRCC3O43542 346 aa12.29□□□□□ -0.44
SF1-202ENST00000334944 RAMP1O60894 148 aa12.29□□□□□ -0.44
SF1-202ENST00000334944 SPCS3P61009 180 aa12.29□□□□□ -0.44
SF1-202ENST00000334944 HSF1Q00613 529 aa12.29□□□□□ -0.44
SF1-202ENST00000334944 NUP54Q7Z3B4 507 aa12.29□□□□□ -0.44
SF1-202ENST00000334944 ZSCAN4Q8NAM6 433 aaPredicted RBP12.29□□□□□ -0.44
SF1-202ENST00000334944 CLEC1AQ8NC01 280 aa12.29□□□□□ -0.44
SF1-202ENST00000334944 OR13C3Q8NGS6 347 aa12.29□□□□□ -0.44
SF1-202ENST00000334944 OR52N5Q8NH56 324 aa12.29□□□□□ -0.44
SF1-202ENST00000334944 FAM46BQ96A09 425 aa12.29□□□□□ -0.44
SF1-202ENST00000334944 SHDQ96IW2 340 aa12.29□□□□□ -0.44
SF1-202ENST00000334944 CYYR1Q96J86 154 aa12.29□□□□□ -0.44
SF1-202ENST00000334944 PPP4R1LQ9P1A2 415 aa12.29□□□□□ -0.44
SF1-202ENST00000334944 MRPS18BQ9Y676 258 aaKnown RBP12.29□□□□□ -0.44
SF1-202ENST00000334944 TMEM269A0A1B0GVZ9 245 aa12.29□□□□□ -0.44
SF1-202ENST00000334944 SLC25A4P12235 298 aa12.29□□□□□ -0.44
SF1-202ENST00000334944 ANOS1P23352 680 aa12.29□□□□□ -0.44
SF1-202ENST00000334944 NUBP1P53384 320 aa12.29□□□□□ -0.44
SF1-202ENST00000334944 C17orf67Q0P5P2 114 aa12.29□□□□□ -0.44
SF1-202ENST00000334944 MFAP5Q13361 173 aa12.29□□□□□ -0.44
SF1-202ENST00000334944 RAB11BQ15907 218 aa12.29□□□□□ -0.44
SF1-202ENST00000334944 REC114Q7Z4M0 266 aa12.29□□□□□ -0.44
SF1-202ENST00000334944 TMEM234Q8WY98 164 aa12.29□□□□□ -0.44
SF1-202ENST00000334944 SPACA5Q96QH8 159 aa12.29□□□□□ -0.44
SF1-202ENST00000334944 CMKLR1Q99788 373 aa12.29□□□□□ -0.44
SF1-202ENST00000334944 SPACA1Q9HBV2 294 aa12.29□□□□□ -0.44
SF1-202ENST00000334944 CYTL1Q9NRR1 136 aa12.29□□□□□ -0.44
SF1-202ENST00000334944 TMEM100Q9NV29 134 aa12.29□□□□□ -0.44
SF1-202ENST00000334944 VSX1Q9NZR4 365 aaPredicted RBP12.29□□□□□ -0.44
SF1-202ENST00000334944 WNT16Q9UBV4 365 aa12.29□□□□□ -0.44
SF1-202ENST00000334944 RARRES3Q9UL19 164 aa12.29□□□□□ -0.44
SF1-202ENST00000334944 VSIG4Q9Y279 399 aa12.29□□□□□ -0.44
SF1-202ENST00000334944 CPAMD8Q8IZJ3 1885 aa12.28□□□□□ -0.44
SF1-202ENST00000334944 LY6G6EA0A0G2JKS1 128 aa12.28□□□□□ -0.44
SF1-202ENST00000334944 LOC107986453A0A1B0GWG9 222 aa12.28□□□□□ -0.44
SF1-202ENST00000334944 ZNF814B7Z6K7 855 aa12.28□□□□□ -0.44
SF1-202ENST00000334944 CSRP1P21291 193 aaKnown RBP12.28□□□□□ -0.44
SF1-202ENST00000334944 RAB5CP51148 216 aa12.28□□□□□ -0.44
SF1-202ENST00000334944 TMEM244Q5VVB8 128 aa12.28□□□□□ -0.44
SF1-202ENST00000334944 KCTD18Q6PI47 426 aaPredicted RBP12.28□□□□□ -0.44
SF1-202ENST00000334944 H1FNTQ75WM6 255 aaPredicted RBP12.28□□□□□ -0.44
SF1-202ENST00000334944 BPIFB2Q8N4F0 458 aa12.28□□□□□ -0.44
SF1-202ENST00000334944 SLC26A10Q8NG04 563 aa12.28□□□□□ -0.44
SF1-202ENST00000334944 CD300LFQ8TDQ1 290 aa12.28□□□□□ -0.44
SF1-202ENST00000334944 SLC6A7Q99884 636 aa12.28□□□□□ -0.44
SF1-202ENST00000334944 GPR61Q9BZJ8 451 aa12.28□□□□□ -0.44
SF1-202ENST00000334944 SRPK3Q9UPE1 567 aa12.28□□□□□ -0.44
SF1-202ENST00000334944 U3KQA8 63 aa12.28□□□□□ -0.44
SF1-202ENST00000334944 ADAMTS9Q9P2N4 1935 aa12.28□□□□□ -0.44
SF1-202ENST00000334944 FAM186AA6NE01 2351 aa12.28□□□□□ -0.44
SF1-202ENST00000334944 H0YIZ8 118 aa12.28□□□□□ -0.44
SF1-202ENST00000334944 SFTPCP11686 197 aa12.28□□□□□ -0.44
SF1-202ENST00000334944 PCP4P48539 62 aa12.28□□□□□ -0.44
SF1-202ENST00000334944 MYBPHQ13203 477 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms