RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 DAPK3O43293 454 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 SPOPO43791 374 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 MRPL33O75394 65 aaKnown RBP1.12□□□□□ -2.23
LINC00643-201ENST00000334389 SC5DO75845 299 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 HMGN1P05114 100 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 CD1AP06126 327 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 CSN3P07498 182 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 CTSBP07858 339 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 ADRA2AP08913 450 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 CD28P10747 220 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 ATP5F1P24539 256 aaPredicted RBP1.12□□□□□ -2.23
LINC00643-201ENST00000334389 IL2P60568 153 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 PKIAP61925 76 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 GNB2P62879 340 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 HERVK_113P63132 956 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 IL1RL1Q01638 556 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 ITKQ08881 620 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 SCRN3Q0VDG4 424 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 STX4Q12846 297 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 FADDQ13158 208 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 PGS1Q32NB8 556 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 GFOD2Q3B7J2 385 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 C1orf134Q5TEV5 83 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 Q5VSD8 79 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 SLC35E4Q6ICL7 350 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 CD300LDQ6UXZ3 194 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 ZNF782Q6ZMW2 699 aaPredicted RBP1.12□□□□□ -2.23
LINC00643-201ENST00000334389 CATSPERDQ86XM0 798 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 LINC00346Q8IVM7 164 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 ASCC1Q8N9N2 400 aaKnown RBP1.12□□□□□ -2.23
LINC00643-201ENST00000334389 LRRC75AQ8NAA5 344 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 BPIFCQ8NFQ6 507 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 PNPT1Q8TCS8 783 aaKnown RBP1.12□□□□□ -2.23
LINC00643-201ENST00000334389 BLOC1S5Q8TDH9 187 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 REXO5Q96IC2 774 aaKnown RBP1.12□□□□□ -2.23
LINC00643-201ENST00000334389 CAPZA3Q96KX2 299 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 PLIN2Q99541 437 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 MCHR1Q99705 422 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 ARHGDIGQ99819 225 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 EBF4Q9BQW3 602 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 TPK1Q9H3S4 243 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 COPS7BQ9H9Q2 264 aaPredicted RBP1.12□□□□□ -2.23
LINC00643-201ENST00000334389 INIPQ9NRY2 104 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 EIF3KQ9UBQ5 218 aaKnown RBP1.12□□□□□ -2.23
LINC00643-201ENST00000334389 BAIAP2L1Q9UHR4 511 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 FBXL2Q9UKC9 423 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 NUDT5Q9UKK9 219 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 PCTPQ9UKL6 214 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 CHTOPQ9Y3Y2 248 aaKnown RBP1.12□□□□□ -2.23
LINC00643-201ENST00000334389 FAM32AQ9Y421 112 aaKnown RBP1.12□□□□□ -2.23
LINC00643-201ENST00000334389 SAR1BQ9Y6B6 198 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 WNK2Q9Y3S1 2297 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 MUC2Q02817 5179 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 UTRNP46939 3433 aa1.12□□□□□ -2.23
LINC00643-201ENST00000334389 TRBV7-9A0A0J9YWB2 115 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 A0A0U1RQV5 110 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 A0A1W2PPM1 405 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 TMEM82A0PJX8 343 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 CTAGE9A4FU28 777 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 GGT3PA6NGU5 568 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 OR51F1A6NGY5 319 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 C15orf61A6NNL5 157 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 COPEO14579 308 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 KCNK2O95069 426 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 LRATO95237 230 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 CNIH1O95406 144 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 RAB36O95755 333 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 TOMM40O96008 361 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 ALPLP05186 524 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 JUNP05412 331 aaKnown RBP1.11□□□□□ -2.23
LINC00643-201ENST00000334389 CRYGBP07316 175 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 INHBAP08476 426 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 SNRPB2P08579 225 aaKnown RBP1.11□□□□□ -2.23
LINC00643-201ENST00000334389 CTAGE8P0CG41 777 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 IGHV4-38-2P0DP08 117 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 NR2F1P10589 423 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 UROSP10746 265 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 S100A1P23297 94 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 MPSTP25325 297 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 ALDH3A1P30838 453 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 CXCR5P32302 372 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 MAGEA2P43356 314 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 KLK7P49862 253 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 DIO1P49895 249 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 ETV1P50549 477 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 GNB1P62873 340 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 EMX2Q04743 252 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 SCARB2Q14108 478 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 SLC35D3Q5M8T2 416 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 SNAP47Q5SQN1 464 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 SLC25A30Q5SVS4 291 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 OTUD3Q5T2D3 398 aaPredicted RBP1.11□□□□□ -2.23
LINC00643-201ENST00000334389 ANXA8L1Q5VT79 327 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 SLC22A25Q6T423 547 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 CYP20A1Q6UW02 462 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 Q6ZS49 121 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 VMO1Q7Z5L0 202 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 LHFPL3Q86UP9 236 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 VRK2Q86Y07 508 aa1.11□□□□□ -2.23
LINC00643-201ENST00000334389 VRK3Q8IV63 474 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms