RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 MSGN1A6NI15 193 aa11.78□□□□□ -0.52
TUBA1B-201ENST00000332858 GSTP1P09211 210 aaKnown RBP11.78□□□□□ -0.52
TUBA1B-201ENST00000332858 CCL4P13236 92 aa11.78□□□□□ -0.52
TUBA1B-201ENST00000332858 PNLIPP16233 465 aa11.78□□□□□ -0.52
TUBA1B-201ENST00000332858 SERPINA2P20848 420 aa11.78□□□□□ -0.52
TUBA1B-201ENST00000332858 PTGFRP43088 359 aa11.78□□□□□ -0.52
TUBA1B-201ENST00000332858 RIPPLY1Q0D2K3 151 aa11.78□□□□□ -0.52
TUBA1B-201ENST00000332858 SNTB1Q13884 538 aaKnown RBP11.78□□□□□ -0.52
TUBA1B-201ENST00000332858 PAN3Q58A45 887 aaKnown RBP11.78□□□□□ -0.52
TUBA1B-201ENST00000332858 INO80EQ8NBZ0 244 aaPredicted RBP11.78□□□□□ -0.52
TUBA1B-201ENST00000332858 OR1S2Q8NGQ3 325 aa11.78□□□□□ -0.52
TUBA1B-201ENST00000332858 PRR7Q8TB68 274 aa11.78□□□□□ -0.52
TUBA1B-201ENST00000332858 PIGTQ969N2 578 aa11.78□□□□□ -0.52
TUBA1B-201ENST00000332858 CLDN23Q96B33 292 aa11.78□□□□□ -0.52
TUBA1B-201ENST00000332858 SHDQ96IW2 340 aa11.78□□□□□ -0.52
TUBA1B-201ENST00000332858 NUDT16L1Q9BRJ7 211 aaKnown RBP11.78□□□□□ -0.52
TUBA1B-201ENST00000332858 RBM24Q9BX46 236 aaKnown RBP11.78□□□□□ -0.52
TUBA1B-201ENST00000332858 SLC26A1Q9H2B4 701 aa11.78□□□□□ -0.52
TUBA1B-201ENST00000332858 ZNF581Q9P0T4 197 aa11.78□□□□□ -0.52
TUBA1B-201ENST00000332858 ZIC3O60481 467 aa11.77□□□□□ -0.52
TUBA1B-201ENST00000332858 SCGNO76038 276 aa11.77□□□□□ -0.52
TUBA1B-201ENST00000332858 ONECUT2O95948 504 aa11.77□□□□□ -0.52
TUBA1B-201ENST00000332858 SLC35A1P78382 337 aa11.77□□□□□ -0.52
TUBA1B-201ENST00000332858 ZNF468Q5VIY5 522 aaPredicted RBP11.77□□□□□ -0.52
TUBA1B-201ENST00000332858 RAET1LQ5VY80 246 aa11.77□□□□□ -0.52
TUBA1B-201ENST00000332858 LYSMD4Q5XG99 296 aa11.77□□□□□ -0.52
TUBA1B-201ENST00000332858 OR52H1Q8NGJ2 320 aa11.77□□□□□ -0.52
TUBA1B-201ENST00000332858 DCUN1D4Q92564 292 aa11.77□□□□□ -0.52
TUBA1B-201ENST00000332858 WNT2BQ93097 391 aa11.77□□□□□ -0.52
TUBA1B-201ENST00000332858 NABP1Q96AH0 204 aa11.77□□□□□ -0.52
TUBA1B-201ENST00000332858 OR10A2Q9H208 303 aa11.77□□□□□ -0.52
TUBA1B-201ENST00000332858 GP1BAP07359 652 aa11.77□□□□□ -0.53
TUBA1B-201ENST00000332858 TBPP20226 339 aa11.77□□□□□ -0.53
TUBA1B-201ENST00000332858 BLVRBP30043 206 aaPredicted RBP11.77□□□□□ -0.53
TUBA1B-201ENST00000332858 CSNK1A1P48729 337 aa11.77□□□□□ -0.53
TUBA1B-201ENST00000332858 VAX1Q5SQQ9 334 aa11.77□□□□□ -0.53
TUBA1B-201ENST00000332858 TMEM200AQ86VY9 491 aa11.77□□□□□ -0.53
TUBA1B-201ENST00000332858 OR10C1Q96KK4 312 aa11.77□□□□□ -0.53
TUBA1B-201ENST00000332858 OCSTAMPQ9BR26 566 aa11.77□□□□□ -0.53
TUBA1B-201ENST00000332858 DUSP23Q9BVJ7 150 aa11.77□□□□□ -0.53
TUBA1B-201ENST00000332858 LDAHQ9H6V9 325 aa11.77□□□□□ -0.53
TUBA1B-201ENST00000332858 C19orf25Q9UFG5 118 aaPredicted RBP11.77□□□□□ -0.53
TUBA1B-201ENST00000332858 FAM186AA6NE01 2351 aa11.77□□□□□ -0.53
TUBA1B-201ENST00000332858 AMY2BP19961 511 aa11.77□□□□□ -0.53
TUBA1B-201ENST00000332858 NTF4P34130 210 aa11.77□□□□□ -0.53
TUBA1B-201ENST00000332858 EIF1P41567 113 aaKnown RBP11.77□□□□□ -0.53
TUBA1B-201ENST00000332858 SNU13P55769 128 aaKnown RBP11.77□□□□□ -0.53
TUBA1B-201ENST00000332858 ZNF239Q16600 458 aaKnown RBP11.77□□□□□ -0.53
TUBA1B-201ENST00000332858 SNAI3Q3KNW1 292 aa11.77□□□□□ -0.53
TUBA1B-201ENST00000332858 GTPBP8Q8N3Z3 284 aaPredicted RBP11.77□□□□□ -0.53
TUBA1B-201ENST00000332858 FAM89BQ8N5H3 189 aa11.77□□□□□ -0.53
TUBA1B-201ENST00000332858 OR56B1Q8NGI3 324 aa11.77□□□□□ -0.53
TUBA1B-201ENST00000332858 SLC25A43Q8WUT9 341 aaPredicted RBP11.77□□□□□ -0.53
TUBA1B-201ENST00000332858 HDHD3Q9BSH5 251 aaPredicted RBP11.77□□□□□ -0.53
TUBA1B-201ENST00000332858 ELL3Q9HB65 397 aaPredicted RBP11.77□□□□□ -0.53
TUBA1B-201ENST00000332858 OR5AC2Q9NZP5 309 aa11.77□□□□□ -0.53
TUBA1B-201ENST00000332858 PCDHB10Q9UN67 800 aa11.77□□□□□ -0.53
TUBA1B-201ENST00000332858 AHCTF1Q8WYP5 2266 aa11.77□□□□□ -0.53
TUBA1B-201ENST00000332858 IGHV1-45A0A0A0MS14 117 aa11.76□□□□□ -0.53
TUBA1B-201ENST00000332858 A0A0B4J2A0 478 aa11.76□□□□□ -0.53
TUBA1B-201ENST00000332858 FOXI3A8MTJ6 420 aaPredicted RBP11.76□□□□□ -0.53
TUBA1B-201ENST00000332858 BET1O15155 118 aa11.76□□□□□ -0.53
TUBA1B-201ENST00000332858 KLF7O75840 302 aaPredicted RBP11.76□□□□□ -0.53
TUBA1B-201ENST00000332858 IGLV3-1P01715 115 aa11.76□□□□□ -0.53
TUBA1B-201ENST00000332858 FCGR2AP12318 317 aa11.76□□□□□ -0.53
TUBA1B-201ENST00000332858 MSR1P21757 451 aa11.76□□□□□ -0.53
TUBA1B-201ENST00000332858 ADH6P28332 368 aa11.76□□□□□ -0.53
TUBA1B-201ENST00000332858 DEFA5Q01523 94 aa11.76□□□□□ -0.53
TUBA1B-201ENST00000332858 OR5H2Q8NGV7 314 aa11.76□□□□□ -0.53
TUBA1B-201ENST00000332858 PIK3IP1Q96FE7 263 aa11.76□□□□□ -0.53
TUBA1B-201ENST00000332858 NARS2Q96I59 477 aaKnown RBP11.76□□□□□ -0.53
TUBA1B-201ENST00000332858 NELFAQ9H3P2 528 aa11.76□□□□□ -0.53
TUBA1B-201ENST00000332858 SHPKQ9UHJ6 478 aa11.76□□□□□ -0.53
TUBA1B-201ENST00000332858 PIGLQ9Y2B2 252 aa11.76□□□□□ -0.53
TUBA1B-201ENST00000332858 PTRH2Q9Y3E5 179 aaKnown RBP11.76□□□□□ -0.53
TUBA1B-201ENST00000332858 SHANK1Q9Y566 2161 aa11.76□□□□□ -0.53
TUBA1B-201ENST00000332858 LOC102725191A0A1B0GVB3 256 aa11.76□□□□□ -0.53
TUBA1B-201ENST00000332858 TP53I11O14683 189 aa11.76□□□□□ -0.53
TUBA1B-201ENST00000332858 ZNF205O95201 554 aa11.76□□□□□ -0.53
TUBA1B-201ENST00000332858 HPNP05981 417 aa11.76□□□□□ -0.53
TUBA1B-201ENST00000332858 GRB2P62993 217 aaKnown RBP11.76□□□□□ -0.53
TUBA1B-201ENST00000332858 DRAM2Q6UX65 266 aa11.76□□□□□ -0.53
TUBA1B-201ENST00000332858 C6orf201Q7Z4U5 140 aa11.76□□□□□ -0.53
TUBA1B-201ENST00000332858 ZIC4Q8N9L1 334 aa11.76□□□□□ -0.53
TUBA1B-201ENST00000332858 OR51F2Q8NH61 342 aa11.76□□□□□ -0.53
TUBA1B-201ENST00000332858 OR2AE1Q8NHA4 323 aa11.76□□□□□ -0.53
TUBA1B-201ENST00000332858 FBXO17Q96EF6 278 aa11.76□□□□□ -0.53
TUBA1B-201ENST00000332858 C12orf4Q9NQ89 552 aa11.76□□□□□ -0.53
TUBA1B-201ENST00000332858 FAM74A7A6NL05 159 aa11.75□□□□□ -0.53
TUBA1B-201ENST00000332858 TNFSF11O14788 317 aa11.75□□□□□ -0.53
TUBA1B-201ENST00000332858 MSTNO14793 375 aa11.75□□□□□ -0.53
TUBA1B-201ENST00000332858 SFT2D2O95562 160 aa11.75□□□□□ -0.53
TUBA1B-201ENST00000332858 CSNK2A1P68400 391 aaPredicted RBP11.75□□□□□ -0.53
TUBA1B-201ENST00000332858 SRSF3P84103 164 aaKnown RBP11.75□□□□□ -0.53
TUBA1B-201ENST00000332858 ECH1Q13011 328 aa11.75□□□□□ -0.53
TUBA1B-201ENST00000332858 FAM74A3Q4VXF1 159 aa11.75□□□□□ -0.53
TUBA1B-201ENST00000332858 LHFPL1Q86WI0 220 aa11.75□□□□□ -0.53
TUBA1B-201ENST00000332858 ARRDC1Q8N5I2 433 aa11.75□□□□□ -0.53
TUBA1B-201ENST00000332858 CSNK2A3Q8NEV1 391 aa11.75□□□□□ -0.53
TUBA1B-201ENST00000332858 LRRC46Q96FV0 321 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms