RNA–Protein interactions for RNA: ENST00000332814.6

C11orf88-201, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS P4 TSL 5 BASIC

Gene C11orf88, Length 795 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-201ENST00000332814 C1orf159Q96HA4 380 aa13.78□□□□□ -0.2
C11orf88-201ENST00000332814 RNF170Q96K19 258 aa13.78□□□□□ -0.2
C11orf88-201ENST00000332814 C4orf36Q96KX1 117 aa13.78□□□□□ -0.2
C11orf88-201ENST00000332814 SHARPINQ9H0F6 387 aa13.78□□□□□ -0.2
C11orf88-201ENST00000332814 LPAR3Q9UBY5 353 aa13.78□□□□□ -0.2
C11orf88-201ENST00000332814 MYRFQ9Y2G1 1151 aa13.78□□□□□ -0.2
C11orf88-201ENST00000332814 CHD3Q12873 2000 aaKnown RBP13.78□□□□□ -0.2
C11orf88-201ENST00000332814 IGHA1P01876 353 aa13.77□□□□□ -0.21
C11orf88-201ENST00000332814 RPS2P15880 293 aaKnown RBP13.77□□□□□ -0.21
C11orf88-201ENST00000332814 ZNF12P17014 697 aa13.77□□□□□ -0.21
C11orf88-201ENST00000332814 MYL12AP19105 171 aa13.77□□□□□ -0.21
C11orf88-201ENST00000332814 RBMXP38159 391 aaKnown RBP13.77□□□□□ -0.21
C11orf88-201ENST00000332814 PMELP40967 661 aa13.77□□□□□ -0.21
C11orf88-201ENST00000332814 DVL1P1P54792 670 aaPredicted RBP13.77□□□□□ -0.21
C11orf88-201ENST00000332814 MRPL28Q13084 256 aaKnown RBP13.77□□□□□ -0.21
C11orf88-201ENST00000332814 CHRFAM7AQ494W8 412 aa13.77□□□□□ -0.21
C11orf88-201ENST00000332814 CEP78Q5JTW2 689 aa13.77□□□□□ -0.21
C11orf88-201ENST00000332814 NLRC3Q7RTR2 1065 aa13.77□□□□□ -0.21
C11orf88-201ENST00000332814 SYS1Q8N2H4 156 aa13.77□□□□□ -0.21
C11orf88-201ENST00000332814 OR5P3Q8WZ94 311 aa13.77□□□□□ -0.21
C11orf88-201ENST00000332814 TMEM186Q96B77 213 aa13.77□□□□□ -0.21
C11orf88-201ENST00000332814 TEP1Q99973 2627 aaKnown RBP13.77□□□□□ -0.21
C11orf88-201ENST00000332814 TRIM36Q9NQ86 728 aa13.77□□□□□ -0.21
C11orf88-201ENST00000332814 MRPS18AQ9NVS2 196 aaKnown RBP13.77□□□□□ -0.21
C11orf88-201ENST00000332814 TMEM160Q9NX00 188 aa13.77□□□□□ -0.21
C11orf88-201ENST00000332814 CHCHD3Q9NX63 227 aaKnown RBP13.77□□□□□ -0.21
C11orf88-201ENST00000332814 ERVK13-1Q9NX77 482 aa13.77□□□□□ -0.21
C11orf88-201ENST00000332814 TRAV20A0A0B4J274 112 aa13.76□□□□□ -0.21
C11orf88-201ENST00000332814 LOC107986453A0A1B0GWG9 222 aa13.76□□□□□ -0.21
C11orf88-201ENST00000332814 OR5B21A6NL26 309 aa13.76□□□□□ -0.21
C11orf88-201ENST00000332814 DHRS7CA6NNS2 312 aa13.76□□□□□ -0.21
C11orf88-201ENST00000332814 H3BSH0 61 aa13.76□□□□□ -0.21
C11orf88-201ENST00000332814 NRASP01111 189 aa13.76□□□□□ -0.21
C11orf88-201ENST00000332814 DCKP27707 260 aa13.76□□□□□ -0.21
C11orf88-201ENST00000332814 ISL1P61371 349 aa13.76□□□□□ -0.21
C11orf88-201ENST00000332814 GNG3P63215 75 aa13.76□□□□□ -0.21
C11orf88-201ENST00000332814 ZNF154Q13106 437 aa13.76□□□□□ -0.21
C11orf88-201ENST00000332814 CEACAM21Q3KPI0 293 aa13.76□□□□□ -0.21
C11orf88-201ENST00000332814 ESCO2Q56NI9 601 aa13.76□□□□□ -0.21
C11orf88-201ENST00000332814 FAM201AQ5SY85 155 aa13.76□□□□□ -0.21
C11orf88-201ENST00000332814 CLVS2Q5SYC1 327 aa13.76□□□□□ -0.21
C11orf88-201ENST00000332814 TMEM244Q5VVB8 128 aa13.76□□□□□ -0.21
C11orf88-201ENST00000332814 ZNF826PQ6ZT77 177 aa13.76□□□□□ -0.21
C11orf88-201ENST00000332814 OR2G2Q8NGZ5 317 aa13.76□□□□□ -0.21
C11orf88-201ENST00000332814 HAVCR2Q8TDQ0 301 aa13.76□□□□□ -0.21
C11orf88-201ENST00000332814 LRRC29Q8WV35 223 aa13.76□□□□□ -0.21
C11orf88-201ENST00000332814 BEX2Q9BXY8 128 aa13.76□□□□□ -0.21
C11orf88-201ENST00000332814 PPP1R3EQ9H7J1 279 aa13.76□□□□□ -0.21
C11orf88-201ENST00000332814 PATZ1Q9HBE1 687 aaKnown RBP13.76□□□□□ -0.21
C11orf88-201ENST00000332814 FGF20Q9NP95 211 aaPredicted RBP13.76□□□□□ -0.21
C11orf88-201ENST00000332814 MIOXQ9UGB7 285 aa13.76□□□□□ -0.21
C11orf88-201ENST00000332814 CDC42EP3Q9UKI2 254 aa13.76□□□□□ -0.21
C11orf88-201ENST00000332814 V9GYS6 101 aa13.76□□□□□ -0.21
C11orf88-201ENST00000332814 ZNF469Q96JG9 3925 aaPredicted RBP13.75□□□□□ -0.21
C11orf88-201ENST00000332814 VPS13CQ709C8 3753 aa13.75□□□□□ -0.21
C11orf88-201ENST00000332814 TRAV38-1A0A0B4J264 116 aa13.75□□□□□ -0.21
C11orf88-201ENST00000332814 CEACAM18A8MTB9 384 aa13.75□□□□□ -0.21
C11orf88-201ENST00000332814 H0YJX3 145 aa13.75□□□□□ -0.21
C11orf88-201ENST00000332814 LGALS8O00214 317 aa13.75□□□□□ -0.21
C11orf88-201ENST00000332814 CRLF1O75462 422 aa13.75□□□□□ -0.21
C11orf88-201ENST00000332814 FOXH1O75593 365 aa13.75□□□□□ -0.21
C11orf88-201ENST00000332814 FSTL3O95633 263 aa13.75□□□□□ -0.21
C11orf88-201ENST00000332814 SERPINA3P01011 423 aa13.75□□□□□ -0.21
C11orf88-201ENST00000332814 GNAO1P09471 354 aa13.75□□□□□ -0.21
C11orf88-201ENST00000332814 CCL1P22362 96 aa13.75□□□□□ -0.21
C11orf88-201ENST00000332814 CPT2P23786 658 aa13.75□□□□□ -0.21
C11orf88-201ENST00000332814 CD80P33681 288 aa13.75□□□□□ -0.21
C11orf88-201ENST00000332814 GPM6AP51674 278 aa13.75□□□□□ -0.21
C11orf88-201ENST00000332814 GBX2P52951 348 aaPredicted RBP13.75□□□□□ -0.21
C11orf88-201ENST00000332814 AQP4P55087 323 aa13.75□□□□□ -0.21
C11orf88-201ENST00000332814 CSNK2BP67870 215 aa13.75□□□□□ -0.21
C11orf88-201ENST00000332814 ZNF404Q494X3 552 aa13.75□□□□□ -0.21
C11orf88-201ENST00000332814 TMPRSS11AQ6ZMR5 421 aa13.75□□□□□ -0.21
C11orf88-201ENST00000332814 DCDC5Q6ZRR9 648 aa13.75□□□□□ -0.21
C11orf88-201ENST00000332814 WDR86Q86TI4 376 aa13.75□□□□□ -0.21
C11orf88-201ENST00000332814 EGFL6Q8IUX8 553 aa13.75□□□□□ -0.21
C11orf88-201ENST00000332814 PRSS35Q8N3Z0 413 aa13.75□□□□□ -0.21
C11orf88-201ENST00000332814 ZNF676Q8N7Q3 588 aa13.75□□□□□ -0.21
C11orf88-201ENST00000332814 DEFB108BQ8NET1 73 aa13.75□□□□□ -0.21
C11orf88-201ENST00000332814 OR8B3Q8NGG8 313 aa13.75□□□□□ -0.21
C11orf88-201ENST00000332814 OR14K1Q8NGZ2 314 aa13.75□□□□□ -0.21
C11orf88-201ENST00000332814 NRG4Q8WWG1 115 aa13.75□□□□□ -0.21
C11orf88-201ENST00000332814 HPSE2Q8WWQ2 592 aa13.75□□□□□ -0.21
C11orf88-201ENST00000332814 OR8B2Q96RD0 313 aa13.75□□□□□ -0.21
C11orf88-201ENST00000332814 GPR173Q9NS66 373 aa13.75□□□□□ -0.21
C11orf88-201ENST00000332814 HIF1ANQ9NWT6 349 aa13.75□□□□□ -0.21
C11orf88-201ENST00000332814 EXOSC1Q9Y3B2 195 aaKnown RBP13.75□□□□□ -0.21
C11orf88-201ENST00000332814 DYSFO75923 2080 aa13.75□□□□□ -0.21
C11orf88-201ENST00000332814 A0A1B0GTI1 187 aa13.74□□□□□ -0.21
C11orf88-201ENST00000332814 ANKRD61A6NGH8 418 aa13.74□□□□□ -0.21
C11orf88-201ENST00000332814 OOEPA6NGQ2 149 aa13.74□□□□□ -0.21
C11orf88-201ENST00000332814 ZNF732B4DXR9 585 aa13.74□□□□□ -0.21
C11orf88-201ENST00000332814 C3orf80F5H4A9 247 aa13.74□□□□□ -0.21
C11orf88-201ENST00000332814 CDIPTO14735 213 aa13.74□□□□□ -0.21
C11orf88-201ENST00000332814 PLPP2O43688 288 aa13.74□□□□□ -0.21
C11orf88-201ENST00000332814 GATBO75879 557 aaKnown RBP13.74□□□□□ -0.21
C11orf88-201ENST00000332814 CCDC159P0C7I6 412 aa13.74□□□□□ -0.21
C11orf88-201ENST00000332814 ZNF20P17024 532 aa13.74□□□□□ -0.21
C11orf88-201ENST00000332814 THBS2P35442 1172 aa13.74□□□□□ -0.21
C11orf88-201ENST00000332814 KIR3DL2P43630 455 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms