RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 PRDM13Q9H4Q3 707 aa16.02■□□□□ 0.16
CLSTN3-202ENST00000331148 GAR1Q9NY12 217 aaKnown RBP16.02■□□□□ 0.16
CLSTN3-202ENST00000331148 TRAV36DV7A0A075B6V5 113 aa16.02■□□□□ 0.15
CLSTN3-202ENST00000331148 A0A1W2PR77 199 aa16.02■□□□□ 0.15
CLSTN3-202ENST00000331148 ZNF354AO60765 605 aaPredicted RBP16.02■□□□□ 0.15
CLSTN3-202ENST00000331148 CTSBP07858 339 aa16.02■□□□□ 0.15
CLSTN3-202ENST00000331148 GSTP1P09211 210 aaKnown RBP16.02■□□□□ 0.15
CLSTN3-202ENST00000331148 GLRA1P23415 457 aa16.02■□□□□ 0.15
CLSTN3-202ENST00000331148 IAH1Q2TAA2 248 aaPredicted RBP16.02■□□□□ 0.15
CLSTN3-202ENST00000331148 AADACL3Q5VUY0 350 aa16.02■□□□□ 0.15
CLSTN3-202ENST00000331148 OR13C9Q8NGT0 318 aa16.02■□□□□ 0.15
CLSTN3-202ENST00000331148 ADAT3Q96EY9 351 aaPredicted RBP16.02■□□□□ 0.15
CLSTN3-202ENST00000331148 CYYR1Q96J86 154 aa16.02■□□□□ 0.15
CLSTN3-202ENST00000331148 SLC35B3Q9H1N7 401 aa16.02■□□□□ 0.15
CLSTN3-202ENST00000331148 KCNJ16Q9NPI9 418 aa16.02■□□□□ 0.15
CLSTN3-202ENST00000331148 GFOD1Q9NXC2 390 aa16.02■□□□□ 0.15
CLSTN3-202ENST00000331148 COA3Q9Y2R0 106 aaPredicted RBP16.02■□□□□ 0.15
CLSTN3-202ENST00000331148 KIF26BQ2KJY2 2108 aa16.02■□□□□ 0.15
CLSTN3-202ENST00000331148 ALPK2Q86TB3 2170 aa16.01■□□□□ 0.15
CLSTN3-202ENST00000331148 DEDDO75618 318 aa16.01■□□□□ 0.15
CLSTN3-202ENST00000331148 DANCRP0C864 163 aa16.01■□□□□ 0.15
CLSTN3-202ENST00000331148 HIST1H1DP16402 221 aaKnown RBP16.01■□□□□ 0.15
CLSTN3-202ENST00000331148 RPS10P46783 165 aaKnown RBP16.01■□□□□ 0.15
CLSTN3-202ENST00000331148 RAP1AP62834 184 aa16.01■□□□□ 0.15
CLSTN3-202ENST00000331148 GLO1Q04760 184 aa16.01■□□□□ 0.15
CLSTN3-202ENST00000331148 DCXRQ7Z4W1 244 aa16.01■□□□□ 0.15
CLSTN3-202ENST00000331148 SLC37A2Q8TED4 501 aa16.01■□□□□ 0.15
CLSTN3-202ENST00000331148 GNRHR2Q96P88 292 aa16.01■□□□□ 0.15
CLSTN3-202ENST00000331148 LRRC61Q9BV99 259 aa16.01■□□□□ 0.15
CLSTN3-202ENST00000331148 ARV1Q9H2C2 271 aa16.01■□□□□ 0.15
CLSTN3-202ENST00000331148 PARPBPQ9NWS1 579 aa16.01■□□□□ 0.15
CLSTN3-202ENST00000331148 OSGIN2Q9Y236 505 aa16.01■□□□□ 0.15
CLSTN3-202ENST00000331148 TDRD6O60522 2096 aaKnown RBP16.01■□□□□ 0.15
CLSTN3-202ENST00000331148 FIGNL2A6NMB9 653 aa16.01■□□□□ 0.15
CLSTN3-202ENST00000331148 RAD51DO75771 328 aa16.01■□□□□ 0.15
CLSTN3-202ENST00000331148 CHRM2P08172 466 aa16.01■□□□□ 0.15
CLSTN3-202ENST00000331148 NDUFA6P56556 154 aa16.01■□□□□ 0.15
CLSTN3-202ENST00000331148 SGCBQ16585 318 aa16.01■□□□□ 0.15
CLSTN3-202ENST00000331148 SSX9Q7RTT3 188 aa16.01■□□□□ 0.15
CLSTN3-202ENST00000331148 SFTPA2Q8IWL1 248 aa16.01■□□□□ 0.15
CLSTN3-202ENST00000331148 ZNF101Q8IZC7 436 aa16.01■□□□□ 0.15
CLSTN3-202ENST00000331148 PRRX2Q99811 253 aa16.01■□□□□ 0.15
CLSTN3-202ENST00000331148 TXNIPQ9H3M7 391 aa16.01■□□□□ 0.15
CLSTN3-202ENST00000331148 LUZP4Q9P127 313 aa16.01■□□□□ 0.15
CLSTN3-202ENST00000331148 GON4LQ3T8J9 2241 aa16■□□□□ 0.15
CLSTN3-202ENST00000331148 SOCS1O15524 211 aa16■□□□□ 0.15
CLSTN3-202ENST00000331148 UTS2O95399 124 aa16■□□□□ 0.15
CLSTN3-202ENST00000331148 CXCR1P25024 350 aa16■□□□□ 0.15
CLSTN3-202ENST00000331148 CAMLGP49069 296 aa16■□□□□ 0.15
CLSTN3-202ENST00000331148 FHITP49789 147 aa16■□□□□ 0.15
CLSTN3-202ENST00000331148 IGLV3-21P80748 117 aaPredicted RBP16■□□□□ 0.15
CLSTN3-202ENST00000331148 FUT7Q11130 342 aa16■□□□□ 0.15
CLSTN3-202ENST00000331148 ERV3-1Q14264 604 aa16■□□□□ 0.15
CLSTN3-202ENST00000331148 LINC00346Q8IVM7 164 aa16■□□□□ 0.15
CLSTN3-202ENST00000331148 ST7LQ8TDW4 575 aa16■□□□□ 0.15
CLSTN3-202ENST00000331148 ERGIC1Q969X5 290 aa16■□□□□ 0.15
CLSTN3-202ENST00000331148 S100A13Q99584 98 aa16■□□□□ 0.15
CLSTN3-202ENST00000331148 C19orf12Q9NSK7 152 aa16■□□□□ 0.15
CLSTN3-202ENST00000331148 PPP4R1LQ9P1A2 415 aa16■□□□□ 0.15
CLSTN3-202ENST00000331148 FBXO7Q9Y3I1 522 aa16■□□□□ 0.15
CLSTN3-202ENST00000331148 FAM221BA6H8Z2 402 aa15.99■□□□□ 0.15
CLSTN3-202ENST00000331148 OR13C7P0DN81 318 aa15.99■□□□□ 0.15
CLSTN3-202ENST00000331148 AMY2BP19961 511 aa15.99■□□□□ 0.15
CLSTN3-202ENST00000331148 RBP2P50120 134 aa15.99■□□□□ 0.15
CLSTN3-202ENST00000331148 DEFB110Q30KQ9 67 aa15.99■□□□□ 0.15
CLSTN3-202ENST00000331148 C1orf140Q5VVS0 124 aa15.99■□□□□ 0.15
CLSTN3-202ENST00000331148 RPUSD3Q6P087 351 aaKnown RBP15.99■□□□□ 0.15
CLSTN3-202ENST00000331148 FIP1L1Q6UN15 594 aaKnown RBP15.99■□□□□ 0.15
CLSTN3-202ENST00000331148 TMEM104Q8NE00 496 aa15.99■□□□□ 0.15
CLSTN3-202ENST00000331148 RHBDD1Q8TEB9 315 aa15.99■□□□□ 0.15
CLSTN3-202ENST00000331148 MR1Q95460 341 aa15.99■□□□□ 0.15
CLSTN3-202ENST00000331148 DOK5Q9P104 306 aa15.99■□□□□ 0.15
CLSTN3-202ENST00000331148 CLDN16Q9Y5I7 305 aa15.99■□□□□ 0.15
CLSTN3-202ENST00000331148 A0A0J9YY10 115 aa15.99■□□□□ 0.15
CLSTN3-202ENST00000331148 K7ESF4 209 aa15.99■□□□□ 0.15
CLSTN3-202ENST00000331148 MPIG6BO95866 241 aa15.99■□□□□ 0.15
CLSTN3-202ENST00000331148 CLPSP04118 112 aa15.99■□□□□ 0.15
CLSTN3-202ENST00000331148 SEC11BP0C7V7 166 aa15.99■□□□□ 0.15
CLSTN3-202ENST00000331148 RNH1P13489 461 aaKnown RBP15.99■□□□□ 0.15
CLSTN3-202ENST00000331148 CHATP28329 748 aa15.99■□□□□ 0.15
CLSTN3-202ENST00000331148 SLC35A1P78382 337 aa15.99■□□□□ 0.15
CLSTN3-202ENST00000331148 CLINT1Q14677 625 aa15.99■□□□□ 0.15
CLSTN3-202ENST00000331148 TTLL10Q6ZVT0 673 aa15.99■□□□□ 0.15
CLSTN3-202ENST00000331148 RNF144BQ7Z419 303 aa15.99■□□□□ 0.15
CLSTN3-202ENST00000331148 MASP2O00187 686 aa15.98■□□□□ 0.15
CLSTN3-202ENST00000331148 SDCBPO00560 298 aaPredicted RBP15.98■□□□□ 0.15
CLSTN3-202ENST00000331148 HIST1H1BP16401 226 aaKnown RBP15.98■□□□□ 0.15
CLSTN3-202ENST00000331148 ZNF823P16415 610 aa15.98■□□□□ 0.15
CLSTN3-202ENST00000331148 CRABP1P29762 137 aa15.98■□□□□ 0.15
CLSTN3-202ENST00000331148 PTGER4P35408 488 aa15.98■□□□□ 0.15
CLSTN3-202ENST00000331148 ZNF93P35789 620 aaPredicted RBP15.98■□□□□ 0.15
CLSTN3-202ENST00000331148 HHEXQ03014 270 aa15.98■□□□□ 0.15
CLSTN3-202ENST00000331148 PCK2Q16822 640 aa15.98■□□□□ 0.15
CLSTN3-202ENST00000331148 MAFIPQ8WZ33 124 aa15.98■□□□□ 0.15
CLSTN3-202ENST00000331148 S100PBPQ96BU1 408 aa15.98■□□□□ 0.15
CLSTN3-202ENST00000331148 MUCL1Q96DR8 90 aa15.98■□□□□ 0.15
CLSTN3-202ENST00000331148 PBDC1Q9BVG4 233 aa15.98■□□□□ 0.15
CLSTN3-202ENST00000331148 PRTFDC1Q9NRG1 225 aa15.98■□□□□ 0.15
CLSTN3-202ENST00000331148 C1orf123Q9NWV4 160 aa15.98■□□□□ 0.15
CLSTN3-202ENST00000331148 SRPK3Q9UPE1 567 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms