RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 HCKP08631 526 aa12.77□□□□□ -0.36
SNX20-202ENST00000330943 SLC2A1P11166 492 aa12.77□□□□□ -0.36
SNX20-202ENST00000330943 EIF2S3P41091 472 aaKnown RBP12.77□□□□□ -0.36
SNX20-202ENST00000330943 DHPSP49366 369 aaPredicted RBP12.77□□□□□ -0.36
SNX20-202ENST00000330943 CSNK1EP49674 416 aaKnown RBP12.77□□□□□ -0.36
SNX20-202ENST00000330943 SNU13P55769 128 aaKnown RBP12.77□□□□□ -0.36
SNX20-202ENST00000330943 RAP1BP61224 184 aa12.77□□□□□ -0.36
SNX20-202ENST00000330943 RAP1AP62834 184 aa12.77□□□□□ -0.36
SNX20-202ENST00000330943 GUK1Q16774 197 aa12.77□□□□□ -0.36
SNX20-202ENST00000330943 HLA-DQA1Q5Y7H0 255 aa12.77□□□□□ -0.36
SNX20-202ENST00000330943 LCN10Q6JVE6 187 aa12.77□□□□□ -0.36
SNX20-202ENST00000330943 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.77□□□□□ -0.36
SNX20-202ENST00000330943 C11orf40Q8WZ69 217 aa12.77□□□□□ -0.36
SNX20-202ENST00000330943 C1orf147Q96MC9 270 aaPredicted RBP12.77□□□□□ -0.36
SNX20-202ENST00000330943 GPER1Q99527 375 aa12.77□□□□□ -0.36
SNX20-202ENST00000330943 OSGIN2Q9Y236 505 aa12.77□□□□□ -0.36
SNX20-202ENST00000330943 B3GALT5Q9Y2C3 310 aa12.77□□□□□ -0.36
SNX20-202ENST00000330943 STARD10Q9Y365 291 aa12.77□□□□□ -0.36
SNX20-202ENST00000330943 LRP4O75096 1905 aa12.77□□□□□ -0.37
SNX20-202ENST00000330943 ABCA7Q8IZY2 2146 aa12.77□□□□□ -0.37
SNX20-202ENST00000330943 TMEM150CB9EJG8 249 aa12.77□□□□□ -0.37
SNX20-202ENST00000330943 MS4A18H0YCH9 400 aa12.77□□□□□ -0.37
SNX20-202ENST00000330943 SCGB1D2O95969 90 aa12.77□□□□□ -0.37
SNX20-202ENST00000330943 GALNSP34059 522 aa12.77□□□□□ -0.37
SNX20-202ENST00000330943 PTGER4P35408 488 aa12.77□□□□□ -0.37
SNX20-202ENST00000330943 SNCAP37840 140 aa12.77□□□□□ -0.37
SNX20-202ENST00000330943 RBMXP38159 391 aaKnown RBP12.77□□□□□ -0.37
SNX20-202ENST00000330943 TDGQ13569 410 aa12.77□□□□□ -0.37
SNX20-202ENST00000330943 MS4A18Q3C1V0 323 aa12.77□□□□□ -0.37
SNX20-202ENST00000330943 NCMAPQ5T1S8 102 aa12.77□□□□□ -0.37
SNX20-202ENST00000330943 GRINAQ7Z429 371 aa12.77□□□□□ -0.37
SNX20-202ENST00000330943 KCNK17Q96T54 332 aa12.77□□□□□ -0.37
SNX20-202ENST00000330943 SOHLH2Q9NX45 425 aa12.77□□□□□ -0.37
SNX20-202ENST00000330943 A0A1W2PPE2 198 aa12.76□□□□□ -0.37
SNX20-202ENST00000330943 FIGNL2A6NMB9 653 aa12.76□□□□□ -0.37
SNX20-202ENST00000330943 YPEL5P62699 121 aa12.76□□□□□ -0.37
SNX20-202ENST00000330943 ZNF529Q6P280 563 aa12.76□□□□□ -0.37
SNX20-202ENST00000330943 ABHD12BQ7Z5M8 362 aaPredicted RBP12.76□□□□□ -0.37
SNX20-202ENST00000330943 OR5AS1Q8N127 324 aa12.76□□□□□ -0.37
SNX20-202ENST00000330943 OR10S1Q8NGN2 331 aa12.76□□□□□ -0.37
SNX20-202ENST00000330943 LYPD6BQ8NI32 183 aa12.76□□□□□ -0.37
SNX20-202ENST00000330943 MRGPRX1Q96LB2 322 aa12.76□□□□□ -0.37
SNX20-202ENST00000330943 SPSB2Q99619 263 aa12.76□□□□□ -0.37
SNX20-202ENST00000330943 EMC6Q9BV81 110 aa12.76□□□□□ -0.37
SNX20-202ENST00000330943 LANCL2Q9NS86 450 aa12.76□□□□□ -0.37
SNX20-202ENST00000330943 C5orf67F2Z3F1 127 aa12.76□□□□□ -0.37
SNX20-202ENST00000330943 AP4M1O00189 453 aa12.76□□□□□ -0.37
SNX20-202ENST00000330943 NDUFS6O75380 124 aaKnown RBP12.76□□□□□ -0.37
SNX20-202ENST00000330943 DDAH2O95865 285 aa12.76□□□□□ -0.37
SNX20-202ENST00000330943 GAPDHP04406 335 aaKnown RBP12.76□□□□□ -0.37
SNX20-202ENST00000330943 IGKV3-11P04433 115 aa12.76□□□□□ -0.37
SNX20-202ENST00000330943 CTSEP14091 401 aa12.76□□□□□ -0.37
SNX20-202ENST00000330943 OR1D4P47884 311 aa12.76□□□□□ -0.37
SNX20-202ENST00000330943 SULT1A1P50225 295 aa12.76□□□□□ -0.37
SNX20-202ENST00000330943 OPN5Q6U736 354 aa12.76□□□□□ -0.37
SNX20-202ENST00000330943 C9orf40Q8IXQ3 194 aa12.76□□□□□ -0.37
SNX20-202ENST00000330943 OR56B1Q8NGI3 324 aa12.76□□□□□ -0.37
SNX20-202ENST00000330943 CD300LFQ8TDQ1 290 aa12.76□□□□□ -0.37
SNX20-202ENST00000330943 ZNF721Q8TF20 911 aa12.76□□□□□ -0.37
SNX20-202ENST00000330943 ERGIC1Q969X5 290 aa12.76□□□□□ -0.37
SNX20-202ENST00000330943 FAM71F1Q96KD3 344 aaPredicted RBP12.76□□□□□ -0.37
SNX20-202ENST00000330943 TUBA4BQ9H853 241 aa12.76□□□□□ -0.37
SNX20-202ENST00000330943 FAM212BQ9NTI7 297 aaPredicted RBP12.76□□□□□ -0.37
SNX20-202ENST00000330943 C1orf123Q9NWV4 160 aa12.76□□□□□ -0.37
SNX20-202ENST00000330943 C14orf166Q9Y224 244 aaKnown RBP12.76□□□□□ -0.37
SNX20-202ENST00000330943 METTL12A8MUP2 240 aa12.75□□□□□ -0.37
SNX20-202ENST00000330943 UMAD1C9J7I0 102 aa12.75□□□□□ -0.37
SNX20-202ENST00000330943 FTCDNL1E5RQL4 147 aa12.75□□□□□ -0.37
SNX20-202ENST00000330943 TSPAN2O60636 221 aa12.75□□□□□ -0.37
SNX20-202ENST00000330943 DEDDO75618 318 aa12.75□□□□□ -0.37
SNX20-202ENST00000330943 IFNA2P01563 188 aa12.75□□□□□ -0.37
SNX20-202ENST00000330943 FHITP49789 147 aa12.75□□□□□ -0.37
SNX20-202ENST00000330943 DAP3P51398 398 aaKnown RBP12.75□□□□□ -0.37
SNX20-202ENST00000330943 FNDC9Q8TBE3 224 aa12.75□□□□□ -0.37
SNX20-202ENST00000330943 PRRX2Q99811 253 aa12.75□□□□□ -0.37
SNX20-202ENST00000330943 RP1P56715 2156 aa12.75□□□□□ -0.37
SNX20-202ENST00000330943 A0A1W2PQD3 144 aa12.75□□□□□ -0.37
SNX20-202ENST00000330943 YKT6O15498 198 aa12.75□□□□□ -0.37
SNX20-202ENST00000330943 THBS4P35443 961 aa12.75□□□□□ -0.37
SNX20-202ENST00000330943 PMELP40967 661 aa12.75□□□□□ -0.37
SNX20-202ENST00000330943 HAAOP46952 286 aa12.75□□□□□ -0.37
SNX20-202ENST00000330943 RABIFP47224 123 aa12.75□□□□□ -0.37
SNX20-202ENST00000330943 FAM3AP98173 230 aa12.75□□□□□ -0.37
SNX20-202ENST00000330943 DEFB119Q8N690 84 aa12.75□□□□□ -0.37
SNX20-202ENST00000330943 OR5D18Q8NGL1 313 aa12.75□□□□□ -0.37
SNX20-202ENST00000330943 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.75□□□□□ -0.37
SNX20-202ENST00000330943 EMG1Q92979 244 aaKnown RBP12.75□□□□□ -0.37
SNX20-202ENST00000330943 TCTN2Q96GX1 697 aa12.75□□□□□ -0.37
SNX20-202ENST00000330943 POLR1DQ9Y2S0 133 aa12.75□□□□□ -0.37
SNX20-202ENST00000330943 NOSIPQ9Y314 301 aaKnown RBP12.75□□□□□ -0.37
SNX20-202ENST00000330943 PRF1P14222 555 aa12.75□□□□□ -0.37
SNX20-202ENST00000330943 TAS2R46P59540 309 aa12.75□□□□□ -0.37
SNX20-202ENST00000330943 WDSUB1Q8N9V3 476 aa12.75□□□□□ -0.37
SNX20-202ENST00000330943 OR51T1Q8NGJ9 327 aa12.75□□□□□ -0.37
SNX20-202ENST00000330943 MRPL38Q96DV4 380 aaKnown RBP12.75□□□□□ -0.37
SNX20-202ENST00000330943 C5orf34Q96MH7 638 aa12.75□□□□□ -0.37
SNX20-202ENST00000330943 URM1Q9BTM9 101 aaKnown RBP12.75□□□□□ -0.37
SNX20-202ENST00000330943 PAPOLGQ9BWT3 736 aaKnown RBP12.75□□□□□ -0.37
SNX20-202ENST00000330943 A0A1B0GV50 99 aa12.74□□□□□ -0.37
SNX20-202ENST00000330943 FBP1P09467 338 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms