RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 CCL4L1Q8NHW4 92 aa11.3□□□□□ -0.6
CCDC60-201ENST00000327554 BAHD1Q8TBE0 780 aaPredicted RBP11.3□□□□□ -0.6
CCDC60-201ENST00000327554 FNDC9Q8TBE3 224 aa11.3□□□□□ -0.6
CCDC60-201ENST00000327554 LURAP1Q96LR2 239 aa11.3□□□□□ -0.6
CCDC60-201ENST00000327554 RBM14Q96PK6 669 aaKnown RBP11.3□□□□□ -0.6
CCDC60-201ENST00000327554 SPACA5Q96QH8 159 aa11.3□□□□□ -0.6
CCDC60-201ENST00000327554 TXNIPQ9H3M7 391 aa11.3□□□□□ -0.6
CCDC60-201ENST00000327554 PISDQ9UG56 409 aa11.3□□□□□ -0.6
CCDC60-201ENST00000327554 SUSD2Q9UGT4 822 aa11.3□□□□□ -0.6
CCDC60-201ENST00000327554 A0A087WWC5 75 aa11.3□□□□□ -0.6
CCDC60-201ENST00000327554 A0A1B0GV50 99 aa11.3□□□□□ -0.6
CCDC60-201ENST00000327554 PRSS38A1L453 326 aa11.3□□□□□ -0.6
CCDC60-201ENST00000327554 H3BQ15 152 aa11.3□□□□□ -0.6
CCDC60-201ENST00000327554 KNG1P01042 644 aa11.3□□□□□ -0.6
CCDC60-201ENST00000327554 PRH1P02810 166 aa11.3□□□□□ -0.6
CCDC60-201ENST00000327554 BCKDHBP21953 392 aa11.3□□□□□ -0.6
CCDC60-201ENST00000327554 RBMXP38159 391 aaKnown RBP11.3□□□□□ -0.6
CCDC60-201ENST00000327554 GLO1Q04760 184 aa11.3□□□□□ -0.6
CCDC60-201ENST00000327554 SGCBQ16585 318 aa11.3□□□□□ -0.6
CCDC60-201ENST00000327554 PLPP4Q5VZY2 271 aa11.3□□□□□ -0.6
CCDC60-201ENST00000327554 LCN10Q6JVE6 187 aa11.3□□□□□ -0.6
CCDC60-201ENST00000327554 OR10AD1Q8NGE0 317 aa11.3□□□□□ -0.6
CCDC60-201ENST00000327554 MRPL24Q96A35 216 aaKnown RBP11.3□□□□□ -0.6
CCDC60-201ENST00000327554 ELSPBP1Q96BH3 223 aa11.3□□□□□ -0.6
CCDC60-201ENST00000327554 SLC25A36Q96CQ1 311 aa11.3□□□□□ -0.6
CCDC60-201ENST00000327554 ARHGAP5-AS1Q96IT6 56 aa11.3□□□□□ -0.6
CCDC60-201ENST00000327554 TMEM68Q96MH6 324 aa11.3□□□□□ -0.6
CCDC60-201ENST00000327554 TP53TG5Q9Y2B4 290 aa11.3□□□□□ -0.6
CCDC60-201ENST00000327554 CLDN16Q9Y5I7 305 aa11.3□□□□□ -0.6
CCDC60-201ENST00000327554 TRAV36DV7A0A075B6V5 113 aa11.29□□□□□ -0.6
CCDC60-201ENST00000327554 TGIF2-C20orf24A0A0A6YYL0 155 aa11.29□□□□□ -0.6
CCDC60-201ENST00000327554 BORCS7-ASMTA0A0B4J1R7 106 aa11.29□□□□□ -0.6
CCDC60-201ENST00000327554 A0A1B0GWJ7 208 aa11.29□□□□□ -0.6
CCDC60-201ENST00000327554 A0A1W2PP11 408 aa11.29□□□□□ -0.6
CCDC60-201ENST00000327554 MKRN2OSH3BPM6 223 aa11.29□□□□□ -0.6
CCDC60-201ENST00000327554 K7N7A8 449 aa11.29□□□□□ -0.6
CCDC60-201ENST00000327554 SYT7O43581 403 aa11.29□□□□□ -0.6
CCDC60-201ENST00000327554 GMFGO60234 142 aa11.29□□□□□ -0.6
CCDC60-201ENST00000327554 CDC14BO60729 498 aa11.29□□□□□ -0.6
CCDC60-201ENST00000327554 PTBP3O95758 552 aaKnown RBP11.29□□□□□ -0.6
CCDC60-201ENST00000327554 CLPSP04118 112 aa11.29□□□□□ -0.6
CCDC60-201ENST00000327554 HPGDP15428 266 aa11.29□□□□□ -0.6
CCDC60-201ENST00000327554 ZNF93P35789 620 aaPredicted RBP11.29□□□□□ -0.6
CCDC60-201ENST00000327554 WASP42768 502 aa11.29□□□□□ -0.6
CCDC60-201ENST00000327554 FOXK1P85037 733 aa11.29□□□□□ -0.6
CCDC60-201ENST00000327554 SGCGQ13326 291 aa11.29□□□□□ -0.6
CCDC60-201ENST00000327554 GGNBP1Q5YKI7 109 aa11.29□□□□□ -0.6
CCDC60-201ENST00000327554 GLIPR1L1Q6UWM5 242 aa11.29□□□□□ -0.6
CCDC60-201ENST00000327554 LFNGQ8NES3 379 aa11.29□□□□□ -0.6
CCDC60-201ENST00000327554 SLC26A10Q8NG04 563 aa11.29□□□□□ -0.6
CCDC60-201ENST00000327554 NELFAQ9H3P2 528 aa11.29□□□□□ -0.6
CCDC60-201ENST00000327554 SMDT1Q9H4I9 107 aa11.29□□□□□ -0.6
CCDC60-201ENST00000327554 BANF2Q9H503 90 aa11.29□□□□□ -0.6
CCDC60-201ENST00000327554 EHFQ9NZC4 300 aa11.29□□□□□ -0.6
CCDC60-201ENST00000327554 THAP10Q9P2Z0 257 aaPredicted RBP11.29□□□□□ -0.6
CCDC60-201ENST00000327554 XIRP2A4UGR9 3374 aa11.29□□□□□ -0.6
CCDC60-201ENST00000327554 TLCD2A6NGC4 264 aa11.29□□□□□ -0.6
CCDC60-201ENST00000327554 TRGC2P03986 189 aa11.29□□□□□ -0.6
CCDC60-201ENST00000327554 HEXBP07686 556 aa11.29□□□□□ -0.6
CCDC60-201ENST00000327554 FABP4P15090 132 aa11.29□□□□□ -0.6
CCDC60-201ENST00000327554 SERPINA2P20848 420 aa11.29□□□□□ -0.6
CCDC60-201ENST00000327554 CEACAM6P40199 344 aa11.29□□□□□ -0.6
CCDC60-201ENST00000327554 OR3A2P47893 321 aa11.29□□□□□ -0.6
CCDC60-201ENST00000327554 MMP16P51512 607 aa11.29□□□□□ -0.6
CCDC60-201ENST00000327554 IGLV3-21P80748 117 aaPredicted RBP11.29□□□□□ -0.6
CCDC60-201ENST00000327554 FUT7Q11130 342 aa11.29□□□□□ -0.6
CCDC60-201ENST00000327554 CHAF1BQ13112 559 aa11.29□□□□□ -0.6
CCDC60-201ENST00000327554 APCDD1LQ8NCL9 501 aa11.29□□□□□ -0.6
CCDC60-201ENST00000327554 MFSD8Q8NHS3 518 aa11.29□□□□□ -0.6
CCDC60-201ENST00000327554 RTN4RQ9BZR6 473 aa11.29□□□□□ -0.6
CCDC60-201ENST00000327554 C8orf33Q9H7E9 229 aaPredicted RBP11.29□□□□□ -0.6
CCDC60-201ENST00000327554 FAM206AQ9NX38 181 aa11.29□□□□□ -0.6
CCDC60-201ENST00000327554 MRPS28Q9Y2Q9 187 aaKnown RBP11.29□□□□□ -0.6
CCDC60-201ENST00000327554 MYO7AQ13402 2215 aa11.28□□□□□ -0.6
CCDC60-201ENST00000327554 A0A1W2PQU0 124 aa11.28□□□□□ -0.6
CCDC60-201ENST00000327554 C17orf51A8MQB3 221 aa11.28□□□□□ -0.6
CCDC60-201ENST00000327554 SCDO00767 359 aa11.28□□□□□ -0.6
CCDC60-201ENST00000327554 HSD17B6O14756 317 aa11.28□□□□□ -0.6
CCDC60-201ENST00000327554 SCGB1D2O95969 90 aa11.28□□□□□ -0.6
CCDC60-201ENST00000327554 MBPP02686 304 aaPredicted RBP11.28□□□□□ -0.6
CCDC60-201ENST00000327554 TAGLN2P37802 199 aaKnown RBP11.28□□□□□ -0.6
CCDC60-201ENST00000327554 NKX6-1P78426 367 aaPredicted RBP11.28□□□□□ -0.6
CCDC60-201ENST00000327554 CCL20P78556 96 aa11.28□□□□□ -0.6
CCDC60-201ENST00000327554 HAGHQ16775 308 aa11.28□□□□□ -0.6
CCDC60-201ENST00000327554 TGIF2LXQ8IUE1 241 aa11.28□□□□□ -0.6
CCDC60-201ENST00000327554 OR1E3Q8WZA6 343 aa11.28□□□□□ -0.6
CCDC60-201ENST00000327554 MVB12AQ96EY5 273 aa11.28□□□□□ -0.6
CCDC60-201ENST00000327554 SOX7Q9BT81 388 aa11.28□□□□□ -0.6
CCDC60-201ENST00000327554 ST6GALNAC5Q9BVH7 336 aa11.28□□□□□ -0.6
CCDC60-201ENST00000327554 URGCP-MRPS24S4R325 110 aa11.28□□□□□ -0.6
CCDC60-201ENST00000327554 E5RGE8 158 aa11.28□□□□□ -0.6
CCDC60-201ENST00000327554 UTS2O95399 124 aa11.28□□□□□ -0.6
CCDC60-201ENST00000327554 KLK2P20151 261 aa11.28□□□□□ -0.6
CCDC60-201ENST00000327554 SNU13P55769 128 aaKnown RBP11.28□□□□□ -0.6
CCDC60-201ENST00000327554 CSNK2A1P68400 391 aaPredicted RBP11.28□□□□□ -0.6
CCDC60-201ENST00000327554 ERV3-1Q14264 604 aa11.28□□□□□ -0.6
CCDC60-201ENST00000327554 HIST2H3PS2Q5TEC6 136 aa11.28□□□□□ -0.6
CCDC60-201ENST00000327554 ARHGEF39Q8N4T4 335 aa11.28□□□□□ -0.6
CCDC60-201ENST00000327554 CSNK2A3Q8NEV1 391 aa11.28□□□□□ -0.6
CCDC60-201ENST00000327554 OR13D1Q8NGV5 346 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms