RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 DOCK6Q96HP0 2047 aa13.13□□□□□ -0.31
TCOF1-201ENST00000323668 ABHD16AO95870 558 aa13.13□□□□□ -0.31
TCOF1-201ENST00000323668 NRASP01111 189 aa13.13□□□□□ -0.31
TCOF1-201ENST00000323668 H2BFSP57053 126 aa13.13□□□□□ -0.31
TCOF1-201ENST00000323668 PPIAP62937 165 aaKnown RBP13.13□□□□□ -0.31
TCOF1-201ENST00000323668 INSM1Q01101 510 aaPredicted RBP13.13□□□□□ -0.31
TCOF1-201ENST00000323668 RGS7BPQ6MZT1 257 aaPredicted RBP13.13□□□□□ -0.31
TCOF1-201ENST00000323668 TNFSF18Q9UNG2 199 aa13.13□□□□□ -0.31
TCOF1-201ENST00000323668 MRPS18BQ9Y676 258 aaKnown RBP13.13□□□□□ -0.31
TCOF1-201ENST00000323668 CD63P08962 238 aa13.13□□□□□ -0.31
TCOF1-201ENST00000323668 MYF5P13349 255 aa13.13□□□□□ -0.31
TCOF1-201ENST00000323668 ZP1P60852 638 aa13.13□□□□□ -0.31
TCOF1-201ENST00000323668 CDH20Q9HBT6 801 aa13.13□□□□□ -0.31
TCOF1-201ENST00000323668 ENY2Q9NPA8 101 aa13.13□□□□□ -0.31
TCOF1-201ENST00000323668 IGHV1OR21-1A0A087WYE8 117 aa13.13□□□□□ -0.31
TCOF1-201ENST00000323668 TRBV5-7A0A0A0MS05 114 aa13.13□□□□□ -0.31
TCOF1-201ENST00000323668 CDC14BO60729 498 aa13.13□□□□□ -0.31
TCOF1-201ENST00000323668 OR3A4PP47883 348 aa13.13□□□□□ -0.31
TCOF1-201ENST00000323668 ZNF345Q14585 488 aa13.13□□□□□ -0.31
TCOF1-201ENST00000323668 AADACL3Q5VUY0 350 aa13.13□□□□□ -0.31
TCOF1-201ENST00000323668 ASB10Q8WXI3 467 aa13.13□□□□□ -0.31
TCOF1-201ENST00000323668 SPACA9Q96E40 222 aaPredicted RBP13.13□□□□□ -0.31
TCOF1-201ENST00000323668 SCARF2Q96GP6 870 aaPredicted RBP13.13□□□□□ -0.31
TCOF1-201ENST00000323668 AKR1E2Q96JD6 320 aa13.13□□□□□ -0.31
TCOF1-201ENST00000323668 ZNF576Q9H609 170 aa13.13□□□□□ -0.31
TCOF1-201ENST00000323668 BOKQ9UMX3 212 aaPredicted RBP13.13□□□□□ -0.31
TCOF1-201ENST00000323668 YBX2Q9Y2T7 364 aaKnown RBP13.13□□□□□ -0.31
TCOF1-201ENST00000323668 NOSIPQ9Y314 301 aaKnown RBP13.13□□□□□ -0.31
TCOF1-201ENST00000323668 FAM96BQ9Y3D0 163 aa13.13□□□□□ -0.31
TCOF1-201ENST00000323668 LAMTOR5O43504 91 aa13.13□□□□□ -0.31
TCOF1-201ENST00000323668 ANGPTL7O43827 346 aa13.13□□□□□ -0.31
TCOF1-201ENST00000323668 S100A8P05109 93 aa13.13□□□□□ -0.31
TCOF1-201ENST00000323668 SFTA3P0C7M3 94 aa13.13□□□□□ -0.31
TCOF1-201ENST00000323668 BTCP35070 178 aa13.13□□□□□ -0.31
TCOF1-201ENST00000323668 MRPS34P82930 218 aaKnown RBP13.13□□□□□ -0.31
TCOF1-201ENST00000323668 KIR2DS1A0A191URI9 304 aa13.12□□□□□ -0.31
TCOF1-201ENST00000323668 PIAS2O75928 621 aa13.12□□□□□ -0.31
TCOF1-201ENST00000323668 KIR2DS4P43632 304 aa13.12□□□□□ -0.31
TCOF1-201ENST00000323668 TFF2Q03403 129 aa13.12□□□□□ -0.31
TCOF1-201ENST00000323668 KIAA0141Q14154 515 aaPredicted RBP13.12□□□□□ -0.31
TCOF1-201ENST00000323668 KIR2DS1Q14954 304 aa13.12□□□□□ -0.31
TCOF1-201ENST00000323668 TMEM268Q5VZI3 342 aa13.12□□□□□ -0.31
TCOF1-201ENST00000323668 TFAP2EQ6VUC0 442 aa13.12□□□□□ -0.31
TCOF1-201ENST00000323668 ZNF561Q8N587 486 aa13.12□□□□□ -0.31
TCOF1-201ENST00000323668 SLC26A10Q8NG04 563 aa13.12□□□□□ -0.31
TCOF1-201ENST00000323668 PTX4Q96A99 478 aa13.12□□□□□ -0.31
TCOF1-201ENST00000323668 ANKRD10Q9NXR5 420 aa13.12□□□□□ -0.31
TCOF1-201ENST00000323668 VWA8A3KMH1 1905 aa13.12□□□□□ -0.31
TCOF1-201ENST00000323668 MFSD2BA6NFX1 497 aa13.12□□□□□ -0.31
TCOF1-201ENST00000323668 VSIG8P0DPA2 414 aa13.12□□□□□ -0.31
TCOF1-201ENST00000323668 ZNF273Q14593 569 aa13.12□□□□□ -0.31
TCOF1-201ENST00000323668 HIST2H3AQ71DI3 136 aa13.12□□□□□ -0.31
TCOF1-201ENST00000323668 KIRREL1Q96J84 757 aa13.12□□□□□ -0.31
TCOF1-201ENST00000323668 DFFBO76075 338 aa13.12□□□□□ -0.31
TCOF1-201ENST00000323668 HPNP05981 417 aa13.12□□□□□ -0.31
TCOF1-201ENST00000323668 SLC25A4P12235 298 aa13.12□□□□□ -0.31
TCOF1-201ENST00000323668 OR2B8PP59922 312 aa13.12□□□□□ -0.31
TCOF1-201ENST00000323668 BATF2Q8N1L9 274 aa13.12□□□□□ -0.31
TCOF1-201ENST00000323668 SHARPINQ9H0F6 387 aa13.12□□□□□ -0.31
TCOF1-201ENST00000323668 TIMM10BQ9Y5J6 103 aa13.12□□□□□ -0.31
TCOF1-201ENST00000323668 MBTPS2O43462 519 aa13.11□□□□□ -0.31
TCOF1-201ENST00000323668 EIF2S3LQ2VIR3 472 aaKnown RBP13.11□□□□□ -0.31
TCOF1-201ENST00000323668 SP6Q3SY56 376 aa13.11□□□□□ -0.31
TCOF1-201ENST00000323668 CLEC18BQ6UXF7 455 aa13.11□□□□□ -0.31
TCOF1-201ENST00000323668 RNF133Q8WVZ7 376 aa13.11□□□□□ -0.31
TCOF1-201ENST00000323668 MCHR2Q969V1 340 aa13.11□□□□□ -0.31
TCOF1-201ENST00000323668 SAT2Q96F10 170 aaPredicted RBP13.11□□□□□ -0.31
TCOF1-201ENST00000323668 ZNF426Q9BUY5 554 aa13.11□□□□□ -0.31
TCOF1-201ENST00000323668 NMES1Q9C002 83 aa13.11□□□□□ -0.31
TCOF1-201ENST00000323668 UQCC1Q9NVA1 299 aa13.11□□□□□ -0.31
TCOF1-201ENST00000323668 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.11□□□□□ -0.31
TCOF1-201ENST00000323668 SOCS1O15524 211 aa13.11□□□□□ -0.31
TCOF1-201ENST00000323668 OR2C1O95371 312 aa13.11□□□□□ -0.31
TCOF1-201ENST00000323668 IFNA4P05014 189 aa13.11□□□□□ -0.31
TCOF1-201ENST00000323668 TCN2P20062 427 aa13.11□□□□□ -0.31
TCOF1-201ENST00000323668 AKR1C3P42330 323 aa13.11□□□□□ -0.31
TCOF1-201ENST00000323668 HBG1P69891 147 aa13.11□□□□□ -0.31
TCOF1-201ENST00000323668 HBG2P69892 147 aa13.11□□□□□ -0.31
TCOF1-201ENST00000323668 LHFPL2Q6ZUX7 228 aa13.11□□□□□ -0.31
TCOF1-201ENST00000323668 IL22RA1Q8N6P7 574 aa13.11□□□□□ -0.31
TCOF1-201ENST00000323668 OR10G3Q8NGC4 313 aa13.11□□□□□ -0.31
TCOF1-201ENST00000323668 OR5AP2Q8NGF4 316 aa13.11□□□□□ -0.31
TCOF1-201ENST00000323668 REEP6Q96HR9 211 aa13.11□□□□□ -0.31
TCOF1-201ENST00000323668 ST3GAL6Q9Y274 331 aa13.11□□□□□ -0.31
TCOF1-201ENST00000323668 URGCP-MRPS24S4R325 110 aa13.11□□□□□ -0.31
TCOF1-201ENST00000323668 IGHV3-15A0A0B4J1V0 119 aa13.11□□□□□ -0.31
TCOF1-201ENST00000323668 C2CD4DB7Z1M9 353 aa13.11□□□□□ -0.31
TCOF1-201ENST00000323668 PNPP00491 289 aa13.11□□□□□ -0.31
TCOF1-201ENST00000323668 RPS11P62280 158 aaKnown RBP eCLIP13.11□□□□□ -0.31
TCOF1-201ENST00000323668 ROM1Q03395 351 aa13.11□□□□□ -0.31
TCOF1-201ENST00000323668 YRDCQ86U90 279 aaKnown RBP13.11□□□□□ -0.31
TCOF1-201ENST00000323668 SUCNR1Q9BXA5 334 aa13.11□□□□□ -0.31
TCOF1-201ENST00000323668 IGKV1D-42A0A075B6H8 117 aa13.11□□□□□ -0.31
TCOF1-201ENST00000323668 ZNF724A8MTY0 619 aa13.11□□□□□ -0.31
TCOF1-201ENST00000323668 SRFP11831 508 aa13.11□□□□□ -0.31
TCOF1-201ENST00000323668 HLA-DOBP13765 273 aa13.11□□□□□ -0.31
TCOF1-201ENST00000323668 NDUFA6P56556 154 aa13.11□□□□□ -0.31
TCOF1-201ENST00000323668 OR1J1Q8NGS3 322 aa13.11□□□□□ -0.31
TCOF1-201ENST00000323668 VSIG4Q9Y279 399 aa13.11□□□□□ -0.31
TCOF1-201ENST00000323668 ZNF814B7Z6K7 855 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms