RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 PDFQ9HBH1 243 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 UTP20O75691 2785 aaKnown RBP4.08□□□□□ -1.76
CNOT1-201ENST00000317147 A0A087WUU8 490 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 SOX1O00570 391 aaPredicted RBP4.08□□□□□ -1.76
CNOT1-201ENST00000317147 ENSAO43768 121 aaKnown RBP4.08□□□□□ -1.76
CNOT1-201ENST00000317147 PITX3O75364 302 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 STC2O76061 302 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 ITGB2P05107 769 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 CLEC2LP0C7M8 214 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 DCTDP32321 178 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 HIST3H3Q16695 136 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 PRR27Q6MZM9 219 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 LIPIQ6XZB0 460 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 TCEAL8Q8IYN2 117 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 ARIH2OSQ8N7S6 290 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 ZCCHC14Q8WYQ9 949 aaKnown RBP4.08□□□□□ -1.76
CNOT1-201ENST00000317147 ABHD1Q96SE0 405 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 RNF2Q99496 336 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 C16orf70Q9BSU1 422 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 DDA1Q9BW61 102 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 NPIPA3F8WFD2 350 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 H3BSH0 61 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 EIF3GO75821 320 aaKnown RBP eCLIP4.08□□□□□ -1.76
CNOT1-201ENST00000317147 CTSDP07339 412 aaPredicted RBP4.08□□□□□ -1.76
CNOT1-201ENST00000317147 HOXB3P14651 431 aaPredicted RBP4.08□□□□□ -1.76
CNOT1-201ENST00000317147 HLA-GP17693 338 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 HOXD9P28356 352 aaPredicted RBP4.08□□□□□ -1.76
CNOT1-201ENST00000317147 BRS3P32247 399 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 PLCXD2Q0VAA5 305 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 GAB1Q13480 694 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 GRM7Q14831 915 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 FAM69BQ5VUD6 431 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 TRAT1Q6PIZ9 186 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 Q8IYB0 196 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 RXFP4Q8TDU9 374 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 SH3RF2Q8TEC5 729 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 SPSB1Q96BD6 273 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 GGACTQ9BVM4 153 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 PBX4Q9BYU1 374 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 HINT3Q9NQE9 182 aaKnown RBP4.08□□□□□ -1.76
CNOT1-201ENST00000317147 FKBP11Q9NYL4 201 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 TAAR2Q9P1P5 351 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 SFT2D2O95562 160 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 SMPD1P17405 629 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 RPS4Y1P22090 263 aaKnown RBP4.08□□□□□ -1.76
CNOT1-201ENST00000317147 HNRNPA2B1P22626 353 aaKnown RBP4.08□□□□□ -1.76
CNOT1-201ENST00000317147 CCL23P55773 120 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 BPIFB3P59826 476 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 ACY1Q03154 408 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 ZNF660Q6AZW8 331 aaPredicted RBP4.08□□□□□ -1.76
CNOT1-201ENST00000317147 HMGN2P46Q86SG4 172 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 BOLLQ8N9W6 283 aaKnown RBP4.08□□□□□ -1.76
CNOT1-201ENST00000317147 OR11H7Q8NGC8 314 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 ADAMTS17Q8TE56 1095 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 CXCL16Q9H2A7 254 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 CALHM2Q9HA72 323 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 CUTCQ9NTM9 273 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 KLF2Q9Y5W3 355 aaPredicted RBP4.08□□□□□ -1.76
CNOT1-201ENST00000317147 C9orf170A2RU37 121 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 H0Y8G0 127 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 K7ERQ8 282 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 M0R1X1 148 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 LEFTY2O00292 366 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 MPDU1O75352 247 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 ZNF250P15622 560 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 ACKR3P25106 362 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 CHRNB4P30926 498 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 MC1RQ01726 317 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 HFEQ30201 348 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 PRSS36Q5K4E3 855 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 MEX3DQ86XN8 651 aaKnown RBP4.08□□□□□ -1.76
CNOT1-201ENST00000317147 FAM219AQ8IW50 185 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 OR10P1Q8NGE3 313 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 CMTM2Q8TAZ6 248 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 SLC35A4Q96G79 324 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 S1PR5Q9H228 398 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 CXorf36Q9H7Y0 433 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 PISDQ9UG56 409 aa4.08□□□□□ -1.76
CNOT1-201ENST00000317147 GEMIN2O14893 280 aaKnown RBP4.07□□□□□ -1.76
CNOT1-201ENST00000317147 WNT11O96014 354 aa4.07□□□□□ -1.76
CNOT1-201ENST00000317147 HLA-DQA1P01909 254 aa4.07□□□□□ -1.76
CNOT1-201ENST00000317147 NDUFB7P17568 137 aa4.07□□□□□ -1.76
CNOT1-201ENST00000317147 BMI1P35226 326 aa4.07□□□□□ -1.76
CNOT1-201ENST00000317147 FASLGP48023 281 aa4.07□□□□□ -1.76
CNOT1-201ENST00000317147 COL9A2Q14055 689 aaPredicted RBP4.07□□□□□ -1.76
CNOT1-201ENST00000317147 TEAD2Q15562 447 aa4.07□□□□□ -1.76
CNOT1-201ENST00000317147 SLC22A6Q4U2R8 563 aa4.07□□□□□ -1.76
CNOT1-201ENST00000317147 HIKESHIQ53FT3 197 aa4.07□□□□□ -1.76
CNOT1-201ENST00000317147 C9orf135Q5VTT2 229 aa4.07□□□□□ -1.76
CNOT1-201ENST00000317147 VASNQ6EMK4 673 aa4.07□□□□□ -1.76
CNOT1-201ENST00000317147 ZNF66Q6ZN08 573 aa4.07□□□□□ -1.76
CNOT1-201ENST00000317147 CARFQ8N187 725 aa4.07□□□□□ -1.76
CNOT1-201ENST00000317147 IGSF8Q969P0 613 aa4.07□□□□□ -1.76
CNOT1-201ENST00000317147 TXNRD2Q9NNW7 524 aa4.07□□□□□ -1.76
CNOT1-201ENST00000317147 PRTFDC1Q9NRG1 225 aa4.07□□□□□ -1.76
CNOT1-201ENST00000317147 THSD7AQ9UPZ6 1657 aa4.07□□□□□ -1.76
CNOT1-201ENST00000317147 CD3DP04234 171 aa4.07□□□□□ -1.76
CNOT1-201ENST00000317147 ZNF136P52737 540 aa4.07□□□□□ -1.76
CNOT1-201ENST00000317147 HSF1Q00613 529 aa4.07□□□□□ -1.76
CNOT1-201ENST00000317147 CRMP1Q14194 572 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms