RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 GSTP1P09211 210 aaKnown RBP12.44□□□□□ -0.42
VRK3-201ENST00000316763 RRASP10301 218 aa12.44□□□□□ -0.42
VRK3-201ENST00000316763 SLC2A1P11166 492 aa12.44□□□□□ -0.42
VRK3-201ENST00000316763 RAC1P63000 192 aa12.44□□□□□ -0.42
VRK3-201ENST00000316763 TBR1Q16650 682 aa12.44□□□□□ -0.42
VRK3-201ENST00000316763 NHLRC3Q5JS37 347 aa12.44□□□□□ -0.42
VRK3-201ENST00000316763 C10orf128Q5T292 105 aa12.44□□□□□ -0.42
VRK3-201ENST00000316763 IGFL2Q6UWQ7 119 aa12.44□□□□□ -0.42
VRK3-201ENST00000316763 SLC25A42Q86VD7 318 aa12.44□□□□□ -0.42
VRK3-201ENST00000316763 OR5AS1Q8N127 324 aa12.44□□□□□ -0.42
VRK3-201ENST00000316763 OR13C8Q8NGS7 320 aa12.44□□□□□ -0.42
VRK3-201ENST00000316763 SLC39A7Q92504 469 aa12.44□□□□□ -0.42
VRK3-201ENST00000316763 TMEM54Q969K7 222 aa12.44□□□□□ -0.42
VRK3-201ENST00000316763 INTS12Q96CB8 462 aaKnown RBP12.44□□□□□ -0.42
VRK3-201ENST00000316763 GPER1Q99527 375 aa12.44□□□□□ -0.42
VRK3-201ENST00000316763 ZNF416Q9BWM5 594 aa12.44□□□□□ -0.42
VRK3-201ENST00000316763 SELENOIQ9C0D9 397 aa12.44□□□□□ -0.42
VRK3-201ENST00000316763 NELFAQ9H3P2 528 aa12.44□□□□□ -0.42
VRK3-201ENST00000316763 KLF13Q9Y2Y9 288 aaPredicted RBP12.44□□□□□ -0.42
VRK3-201ENST00000316763 NOP16Q9Y3C1 178 aaKnown RBP12.44□□□□□ -0.42
VRK3-201ENST00000316763 TNRC6AQ8NDV7 1962 aaKnown RBP12.44□□□□□ -0.42
VRK3-201ENST00000316763 ACACBO00763 2458 aa12.43□□□□□ -0.42
VRK3-201ENST00000316763 GJE1A6NN92 205 aa12.43□□□□□ -0.42
VRK3-201ENST00000316763 I3L521 148 aa12.43□□□□□ -0.42
VRK3-201ENST00000316763 SHOXO15266 292 aa12.43□□□□□ -0.42
VRK3-201ENST00000316763 B3GALNT1O75752 331 aa12.43□□□□□ -0.42
VRK3-201ENST00000316763 APOC1P02654 83 aa12.43□□□□□ -0.42
VRK3-201ENST00000316763 RPA2P15927 270 aa12.43□□□□□ -0.42
VRK3-201ENST00000316763 GNB3P16520 340 aa12.43□□□□□ -0.42
VRK3-201ENST00000316763 SORDQ00796 357 aa12.43□□□□□ -0.42
VRK3-201ENST00000316763 DHRS2Q13268 280 aa12.43□□□□□ -0.42
VRK3-201ENST00000316763 FAHD2BQ6P2I3 314 aaPredicted RBP12.43□□□□□ -0.42
VRK3-201ENST00000316763 PNLDC1Q8NA58 520 aaKnown RBP12.43□□□□□ -0.42
VRK3-201ENST00000316763 NUDCD2Q8WVJ2 157 aa12.43□□□□□ -0.42
VRK3-201ENST00000316763 EXTL1Q92935 676 aa12.43□□□□□ -0.42
VRK3-201ENST00000316763 FAHD2AQ96GK7 314 aa12.43□□□□□ -0.42
VRK3-201ENST00000316763 ZNF703Q9H7S9 590 aaPredicted RBP12.43□□□□□ -0.42
VRK3-201ENST00000316763 WIPF3A6NGB9 483 aa12.43□□□□□ -0.42
VRK3-201ENST00000316763 CRYZL1O95825 349 aa12.43□□□□□ -0.42
VRK3-201ENST00000316763 MPIG6BO95866 241 aa12.43□□□□□ -0.42
VRK3-201ENST00000316763 HLA-AP01891 365 aaKnown RBP12.43□□□□□ -0.42
VRK3-201ENST00000316763 KLK2P20151 261 aa12.43□□□□□ -0.42
VRK3-201ENST00000316763 ZNF133P52736 654 aaPredicted RBP12.43□□□□□ -0.42
VRK3-201ENST00000316763 GSG1LQ6UXU4 331 aa12.43□□□□□ -0.42
VRK3-201ENST00000316763 LYG2Q86SG7 212 aa12.43□□□□□ -0.42
VRK3-201ENST00000316763 YRDCQ86U90 279 aaKnown RBP12.43□□□□□ -0.42
VRK3-201ENST00000316763 GVQW1Q8N7I0 195 aa12.43□□□□□ -0.42
VRK3-201ENST00000316763 OR5M8Q8NGP6 311 aa12.43□□□□□ -0.42
VRK3-201ENST00000316763 OR14L1PQ8NHC6 308 aa12.43□□□□□ -0.42
VRK3-201ENST00000316763 SCARB1Q8WTV0 552 aa12.43□□□□□ -0.42
VRK3-201ENST00000316763 CNTNAP3BQ96NU0 1288 aa12.43□□□□□ -0.42
VRK3-201ENST00000316763 URM1Q9BTM9 101 aaKnown RBP12.43□□□□□ -0.42
VRK3-201ENST00000316763 TMEM59Q9BXS4 323 aa12.43□□□□□ -0.42
VRK3-201ENST00000316763 CNTNAP3Q9BZ76 1288 aa12.43□□□□□ -0.42
VRK3-201ENST00000316763 MFFQ9GZY8 342 aa12.43□□□□□ -0.42
VRK3-201ENST00000316763 LPAR5Q9H1C0 372 aa12.43□□□□□ -0.42
VRK3-201ENST00000316763 COMMD9Q9P000 198 aa12.43□□□□□ -0.42
VRK3-201ENST00000316763 VSIG4Q9Y279 399 aa12.43□□□□□ -0.42
VRK3-201ENST00000316763 CDC14BO60729 498 aa12.42□□□□□ -0.42
VRK3-201ENST00000316763 HPNP05981 417 aa12.42□□□□□ -0.42
VRK3-201ENST00000316763 CD46P15529 392 aa12.42□□□□□ -0.42
VRK3-201ENST00000316763 GDF1P27539 372 aa12.42□□□□□ -0.42
VRK3-201ENST00000316763 HRH1P35367 487 aa12.42□□□□□ -0.42
VRK3-201ENST00000316763 ZNF84P51523 738 aa12.42□□□□□ -0.42
VRK3-201ENST00000316763 GFRA1P56159 465 aa12.42□□□□□ -0.42
VRK3-201ENST00000316763 ARG2P78540 354 aa12.42□□□□□ -0.42
VRK3-201ENST00000316763 SRSF4Q08170 494 aaKnown RBP12.42□□□□□ -0.42
VRK3-201ENST00000316763 GK2Q14410 553 aaPredicted RBP12.42□□□□□ -0.42
VRK3-201ENST00000316763 AANATQ16613 207 aa12.42□□□□□ -0.42
VRK3-201ENST00000316763 PNLIPRP3Q17RR3 467 aa12.42□□□□□ -0.42
VRK3-201ENST00000316763 GFOD2Q3B7J2 385 aa12.42□□□□□ -0.42
VRK3-201ENST00000316763 ACTBL2Q562R1 376 aa12.42□□□□□ -0.42
VRK3-201ENST00000316763 FOXL2NBQ6ZUU3 175 aa12.42□□□□□ -0.42
VRK3-201ENST00000316763 CCDC54Q8NEL0 328 aa12.42□□□□□ -0.42
VRK3-201ENST00000316763 OR9K2Q8NGE7 335 aa12.42□□□□□ -0.42
VRK3-201ENST00000316763 OR56B1Q8NGI3 324 aa12.42□□□□□ -0.42
VRK3-201ENST00000316763 RAB3CQ96E17 227 aa12.42□□□□□ -0.42
VRK3-201ENST00000316763 SPACA5Q96QH8 159 aa12.42□□□□□ -0.42
VRK3-201ENST00000316763 TTTY12Q9BZ98 90 aa12.42□□□□□ -0.42
VRK3-201ENST00000316763 ZNF319Q9P2F9 582 aa12.42□□□□□ -0.42
VRK3-201ENST00000316763 B4GALT7Q9UBV7 327 aa12.42□□□□□ -0.42
VRK3-201ENST00000316763 MAP1BP46821 2468 aaKnown RBP12.41□□□□□ -0.42
VRK3-201ENST00000316763 A0A0U1RQV5 110 aa12.41□□□□□ -0.42
VRK3-201ENST00000316763 KLRC4-KLRK1H3BQV0 150 aa12.41□□□□□ -0.42
VRK3-201ENST00000316763 DHHO43323 396 aa12.41□□□□□ -0.42
VRK3-201ENST00000316763 CD8AP01732 235 aa12.41□□□□□ -0.42
VRK3-201ENST00000316763 THBS4P35443 961 aa12.41□□□□□ -0.42
VRK3-201ENST00000316763 CBX5P45973 191 aa12.41□□□□□ -0.42
VRK3-201ENST00000316763 TNFSF10P50591 281 aa12.41□□□□□ -0.42
VRK3-201ENST00000316763 ECH1Q13011 328 aa12.41□□□□□ -0.42
VRK3-201ENST00000316763 WIPI1Q5MNZ9 446 aaPredicted RBP12.41□□□□□ -0.42
VRK3-201ENST00000316763 LY6G6FQ5SQ64 297 aa12.41□□□□□ -0.42
VRK3-201ENST00000316763 OR52W1Q6IF63 320 aa12.41□□□□□ -0.42
VRK3-201ENST00000316763 GALNTL5Q7Z4T8 443 aa12.41□□□□□ -0.42
VRK3-201ENST00000316763 NAA40Q86UY6 237 aa12.41□□□□□ -0.42
VRK3-201ENST00000316763 OR14K1Q8NGZ2 314 aa12.41□□□□□ -0.42
VRK3-201ENST00000316763 PCNPQ8WW12 178 aaKnown RBP12.41□□□□□ -0.42
VRK3-201ENST00000316763 PHB2Q99623 299 aa12.41□□□□□ -0.42
VRK3-201ENST00000316763 PDCD10Q9BUL8 212 aa12.41□□□□□ -0.42
VRK3-201ENST00000316763 PRORYQ9H606 182 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms