RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 GJA4P35212 333 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 ZNF84P51523 738 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 RUNX3Q13761 415 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 ZNF506Q5JVG8 444 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 C1orf53Q5VUE5 145 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 OR2A2Q6IF42 318 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 DAZLQ92904 295 aaKnown RBP4.24□□□□□ -1.73
PTPN13-201ENST00000316707 C10orf35Q96D05 121 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 CMBLQ96DG6 245 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 ANGPTL4Q9BY76 406 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 TP53TG5Q9Y2B4 290 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 THSD7BQ9C0I4 1608 aa4.24□□□□□ -1.73
PTPN13-201ENST00000316707 MKRN2OSH3BPM6 223 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 NME2P1O60361 137 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 IFNA1P01562 189 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 MBPP02686 304 aaPredicted RBP4.23□□□□□ -1.73
PTPN13-201ENST00000316707 DUSP1P28562 367 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 THBS4P35443 961 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 TAGLN2P37802 199 aaKnown RBP4.23□□□□□ -1.73
PTPN13-201ENST00000316707 TAS2R60P59551 318 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 OR8G1Q15617 311 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 NNATQ16517 81 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 OR2T2Q6IF00 324 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 MARCH3Q86UD3 253 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 TMEM151BQ8IW70 566 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 GATSQ8NAP1 163 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 PLPP5Q8NEB5 264 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 FAM131CQ96AQ9 280 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 NXF5Q9H1B4 397 aaKnown RBP4.23□□□□□ -1.73
PTPN13-201ENST00000316707 PADI1Q9ULC6 663 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 MTCH2Q9Y6C9 303 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 COL4A6Q14031 1691 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 A0A087X0M5 115 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 A0A1B0GX30 115 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 POM121BA6NF01 834 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 HIDE1A8MVS5 230 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 C17orf105B2RV13 164 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 H0YIG0 161 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 TLX3O43711 291 aaPredicted RBP4.23□□□□□ -1.73
PTPN13-201ENST00000316707 ZNF217O75362 1048 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 DFFBO76075 338 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 ARG1P05089 322 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 ZNF728P0DKX0 622 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 DAOP14920 347 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 GNB3P16520 340 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 AKR1C3P42330 323 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 DHPSP49366 369 aaPredicted RBP4.23□□□□□ -1.73
PTPN13-201ENST00000316707 HLA-DRB3P79483 266 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 FOXK1P85037 733 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 BAXQ07812 192 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 PLCXD2Q0VAA5 305 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 LCN10Q6JVE6 187 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 DGAT2L6Q6ZPD8 337 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 FAM219AQ8IW50 185 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 TMEFF1Q8IYR6 380 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 OR13G1Q8NGZ3 307 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 FAM210BQ96KR6 192 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 PIGQQ9BRB3 760 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 TCEAL2Q9H3H9 227 aaPredicted RBP4.23□□□□□ -1.73
PTPN13-201ENST00000316707 MMP24Q9Y5R2 645 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 TRBV24-1A0A075B6N3 115 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 DUXBA0A1W2PPF3 345 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 CDRT15L2A8MXV6 281 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 H3BQ15 152 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 NDUFS6O75380 124 aaKnown RBP4.23□□□□□ -1.73
PTPN13-201ENST00000316707 FAM213BQ8TBF2 198 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 MARS2Q96GW9 593 aaKnown RBP4.23□□□□□ -1.73
PTPN13-201ENST00000316707 TGM7Q96PF1 710 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 ADOQ96SZ5 270 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 NDUFAF3Q9BU61 184 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 GPR61Q9BZJ8 451 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 OR8D2Q9GZM6 311 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 NRSN2Q9GZP1 204 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 FAM206AQ9NX38 181 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.23□□□□□ -1.73
PTPN13-201ENST00000316707 WIPF3A6NGB9 483 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 K7N7A8 449 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 DVL1O14640 695 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 MMP9P14780 707 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 PVRP15151 417 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 DTYMKP23919 212 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 LMO1P25800 156 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 CEACAM6P40199 344 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 OR1D4P47884 311 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 RGS19P49795 217 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 CHAF1BQ13112 559 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 ABHD12BQ7Z5M8 362 aaPredicted RBP4.23□□□□□ -1.73
PTPN13-201ENST00000316707 OR5AS1Q8N127 324 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 SLC38A9Q8NBW4 561 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 SEMA6DQ8NFY4 1073 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 MVB12AQ96EY5 273 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 RSRP1Q9BUV0 290 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 CFHR5Q9BXR6 569 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 SMIM3Q9BZL3 60 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 PRDM13Q9H4Q3 707 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 GPR84Q9NQS5 396 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 GREB1Q4ZG55 1949 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 TRAV1-1A0A0B4J248 108 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 A0A1W2PPE3 182 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 PLPP3O14495 311 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms