RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 NPBWR1P48145 328 aa6.75□□□□□ -1.33
CNOT4-201ENST00000315544 ZNF267Q14586 743 aaPredicted RBP6.75□□□□□ -1.33
CNOT4-201ENST00000315544 SNAI3Q3KNW1 292 aa6.75□□□□□ -1.33
CNOT4-201ENST00000315544 PRSS54Q6PEW0 395 aa6.75□□□□□ -1.33
CNOT4-201ENST00000315544 ALKAL2Q6UX46 152 aa6.75□□□□□ -1.33
CNOT4-201ENST00000315544 PXT1Q8NFP0 134 aa6.75□□□□□ -1.33
CNOT4-201ENST00000315544 OR1M1Q8NGA1 313 aa6.75□□□□□ -1.33
CNOT4-201ENST00000315544 IFI44Q8TCB0 444 aa6.75□□□□□ -1.33
CNOT4-201ENST00000315544 THRSPQ92748 146 aa6.75□□□□□ -1.33
CNOT4-201ENST00000315544 GINS4Q9BRT9 223 aa6.75□□□□□ -1.33
CNOT4-201ENST00000315544 SRXN1Q9BYN0 137 aa6.75□□□□□ -1.33
CNOT4-201ENST00000315544 WDR54Q9H977 334 aa6.75□□□□□ -1.33
CNOT4-201ENST00000315544 DNAJB11Q9UBS4 358 aa6.75□□□□□ -1.33
CNOT4-201ENST00000315544 LPAR3Q9UBY5 353 aa6.75□□□□□ -1.33
CNOT4-201ENST00000315544 HCFC1P51610 2035 aa6.75□□□□□ -1.33
CNOT4-201ENST00000315544 hCG_38984A0A1B0GV85 526 aa6.75□□□□□ -1.33
CNOT4-201ENST00000315544 A0A1W2PPE3 182 aa6.75□□□□□ -1.33
CNOT4-201ENST00000315544 SYNDIG1LA6NDD5 238 aa6.75□□□□□ -1.33
CNOT4-201ENST00000315544 TMEM235A6NFC5 223 aa6.75□□□□□ -1.33
CNOT4-201ENST00000315544 PRSS46E5RG02 174 aa6.75□□□□□ -1.33
CNOT4-201ENST00000315544 ZNF587BE7ETH6 402 aa6.75□□□□□ -1.33
CNOT4-201ENST00000315544 FPR2P25090 351 aa6.75□□□□□ -1.33
CNOT4-201ENST00000315544 CEACAM6P40199 344 aa6.75□□□□□ -1.33
CNOT4-201ENST00000315544 CX3CR1P49238 355 aa6.75□□□□□ -1.33
CNOT4-201ENST00000315544 HOXA1P49639 335 aaPredicted RBP6.75□□□□□ -1.33
CNOT4-201ENST00000315544 OR10K2Q6IF99 312 aa6.75□□□□□ -1.33
CNOT4-201ENST00000315544 GUSBP11Q6P575 273 aa6.75□□□□□ -1.33
CNOT4-201ENST00000315544 DCXRQ7Z4W1 244 aa6.75□□□□□ -1.33
CNOT4-201ENST00000315544 UBAC2Q8NBM4 344 aa6.75□□□□□ -1.33
CNOT4-201ENST00000315544 OR5D14Q8NGL3 314 aa6.75□□□□□ -1.33
CNOT4-201ENST00000315544 ZNF563Q8TA94 476 aa6.75□□□□□ -1.33
CNOT4-201ENST00000315544 TMEM171Q8WVE6 324 aa6.75□□□□□ -1.33
CNOT4-201ENST00000315544 MRGPRX4Q96LA9 322 aa6.75□□□□□ -1.33
CNOT4-201ENST00000315544 TMEM56Q96MV1 263 aa6.75□□□□□ -1.33
CNOT4-201ENST00000315544 CDV3Q9UKY7 258 aaKnown RBP6.75□□□□□ -1.33
CNOT4-201ENST00000315544 TMEM56-RWDD3S4R434 201 aa6.75□□□□□ -1.33
CNOT4-201ENST00000315544 LINC00854A0A1B0GVQ3 168 aa6.75□□□□□ -1.33
CNOT4-201ENST00000315544 A0A1B0GX78 115 aa6.75□□□□□ -1.33
CNOT4-201ENST00000315544 K7ENP7 123 aa6.75□□□□□ -1.33
CNOT4-201ENST00000315544 M0QYG6 137 aa6.75□□□□□ -1.33
CNOT4-201ENST00000315544 TACSTD2P09758 323 aa6.75□□□□□ -1.33
CNOT4-201ENST00000315544 PAICSP22234 425 aaKnown RBP6.75□□□□□ -1.33
CNOT4-201ENST00000315544 HRH1P35367 487 aa6.75□□□□□ -1.33
CNOT4-201ENST00000315544 CAV2P51636 162 aa6.75□□□□□ -1.33
CNOT4-201ENST00000315544 MYBPHQ13203 477 aa6.75□□□□□ -1.33
CNOT4-201ENST00000315544 ZNF169Q14929 603 aaPredicted RBP6.75□□□□□ -1.33
CNOT4-201ENST00000315544 GFOD2Q3B7J2 385 aa6.75□□□□□ -1.33
CNOT4-201ENST00000315544 INO80CQ6PI98 192 aaPredicted RBP6.75□□□□□ -1.33
CNOT4-201ENST00000315544 H1FNTQ75WM6 255 aaPredicted RBP6.75□□□□□ -1.33
CNOT4-201ENST00000315544 GTPBP8Q8N3Z3 284 aaPredicted RBP6.75□□□□□ -1.33
CNOT4-201ENST00000315544 ARRDC1Q8N5I2 433 aa6.75□□□□□ -1.33
CNOT4-201ENST00000315544 RELL2Q8NC24 303 aaPredicted RBP6.75□□□□□ -1.33
CNOT4-201ENST00000315544 OR8H1Q8NGG4 311 aa6.75□□□□□ -1.33
CNOT4-201ENST00000315544 SUN5Q8TC36 379 aa6.75□□□□□ -1.33
CNOT4-201ENST00000315544 RCC1LQ96I51 464 aaKnown RBP6.75□□□□□ -1.33
CNOT4-201ENST00000315544 NRIP2Q9BQI9 281 aa6.75□□□□□ -1.33
CNOT4-201ENST00000315544 CSNK1A1P48729 337 aa6.74□□□□□ -1.33
CNOT4-201ENST00000315544 BLKP51451 505 aa6.74□□□□□ -1.33
CNOT4-201ENST00000315544 NR0B1P51843 470 aaKnown RBP6.74□□□□□ -1.33
CNOT4-201ENST00000315544 FGL1Q08830 312 aa6.74□□□□□ -1.33
CNOT4-201ENST00000315544 ZNF766Q5HY98 468 aa6.74□□□□□ -1.33
CNOT4-201ENST00000315544 THEM4Q5T1C6 240 aa6.74□□□□□ -1.33
CNOT4-201ENST00000315544 C3orf33Q6P1S2 294 aa6.74□□□□□ -1.33
CNOT4-201ENST00000315544 OR8H3Q8N146 312 aa6.74□□□□□ -1.33
CNOT4-201ENST00000315544 ZNF614Q8N883 585 aa6.74□□□□□ -1.33
CNOT4-201ENST00000315544 OR51F2Q8NH61 342 aa6.74□□□□□ -1.33
CNOT4-201ENST00000315544 GLYATL2Q8WU03 294 aa6.74□□□□□ -1.33
CNOT4-201ENST00000315544 WNT2BQ93097 391 aa6.74□□□□□ -1.33
CNOT4-201ENST00000315544 ZFP3Q96NJ6 502 aa6.74□□□□□ -1.33
CNOT4-201ENST00000315544 PECRQ9BY49 303 aa6.74□□□□□ -1.33
CNOT4-201ENST00000315544 PARD6GQ9BYG4 376 aaPredicted RBP6.74□□□□□ -1.33
CNOT4-201ENST00000315544 STMN3Q9NZ72 180 aa6.74□□□□□ -1.33
CNOT4-201ENST00000315544 PRR14LQ5THK1 2151 aa6.74□□□□□ -1.33
CNOT4-201ENST00000315544 IGKV1-39P01597 117 aa6.74□□□□□ -1.33
CNOT4-201ENST00000315544 MAS1P04201 325 aa6.74□□□□□ -1.33
CNOT4-201ENST00000315544 IGKV1D-39P04432 117 aa6.74□□□□□ -1.33
CNOT4-201ENST00000315544 DANCRP0C864 163 aa6.74□□□□□ -1.33
CNOT4-201ENST00000315544 ZNF10P21506 573 aaPredicted RBP6.74□□□□□ -1.33
CNOT4-201ENST00000315544 LAP3P28838 519 aa6.74□□□□□ -1.33
CNOT4-201ENST00000315544 ATP6V1E1P36543 226 aa6.74□□□□□ -1.33
CNOT4-201ENST00000315544 RND3P61587 244 aa6.74□□□□□ -1.33
CNOT4-201ENST00000315544 TSPAN5P62079 268 aa6.74□□□□□ -1.33
CNOT4-201ENST00000315544 RAB11BQ15907 218 aa6.74□□□□□ -1.33
CNOT4-201ENST00000315544 HYAL4Q2M3T9 481 aa6.74□□□□□ -1.33
CNOT4-201ENST00000315544 TMEM128Q5BJH2 165 aa6.74□□□□□ -1.33
CNOT4-201ENST00000315544 FAM74A1Q5RGS3 127 aa6.74□□□□□ -1.33
CNOT4-201ENST00000315544 ZNF468Q5VIY5 522 aaPredicted RBP6.74□□□□□ -1.33
CNOT4-201ENST00000315544 FAM122CQ6P4D5 195 aa6.74□□□□□ -1.33
CNOT4-201ENST00000315544 TAF8Q7Z7C8 310 aa6.74□□□□□ -1.33
CNOT4-201ENST00000315544 BEST3Q8N1M1 668 aa6.74□□□□□ -1.33
CNOT4-201ENST00000315544 C7orf57Q8NEG2 295 aa6.74□□□□□ -1.33
CNOT4-201ENST00000315544 OR51T1Q8NGJ9 327 aa6.74□□□□□ -1.33
CNOT4-201ENST00000315544 SLAMF6Q96DU3 332 aa6.74□□□□□ -1.33
CNOT4-201ENST00000315544 SAT2Q96F10 170 aaPredicted RBP6.74□□□□□ -1.33
CNOT4-201ENST00000315544 DGAT2Q96PD7 388 aa6.74□□□□□ -1.33
CNOT4-201ENST00000315544 ADOQ96SZ5 270 aa6.74□□□□□ -1.33
CNOT4-201ENST00000315544 C1QTNF5Q9BXJ0 243 aa6.74□□□□□ -1.33
CNOT4-201ENST00000315544 RERGLQ9H628 205 aa6.74□□□□□ -1.33
CNOT4-201ENST00000315544 EMC9Q9Y3B6 208 aa6.74□□□□□ -1.33
CNOT4-201ENST00000315544 HDGFL3Q9Y3E1 203 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms