RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 SLC16A13Q7RTY0 426 aa12.32□□□□□ -0.44
CLCN6-201ENST00000312413 TIMD4Q96H15 378 aa12.32□□□□□ -0.44
CLCN6-201ENST00000312413 HMSDA8MTL9 139 aa12.32□□□□□ -0.44
CLCN6-201ENST00000312413 SFT2D2O95562 160 aa12.32□□□□□ -0.44
CLCN6-201ENST00000312413 ST6GAL1P15907 406 aa12.32□□□□□ -0.44
CLCN6-201ENST00000312413 KCNAB1Q14722 419 aa12.32□□□□□ -0.44
CLCN6-201ENST00000312413 RNASEKQ6P5S7 137 aaKnown RBP12.32□□□□□ -0.44
CLCN6-201ENST00000312413 GALMQ96C23 342 aa12.32□□□□□ -0.44
CLCN6-201ENST00000312413 THOC3Q96J01 351 aaKnown RBP12.32□□□□□ -0.44
CLCN6-201ENST00000312413 LRP12Q9Y561 859 aa12.32□□□□□ -0.44
CLCN6-201ENST00000312413 AP4M1O00189 453 aa12.31□□□□□ -0.44
CLCN6-201ENST00000312413 BMPR1BO00238 502 aa12.31□□□□□ -0.44
CLCN6-201ENST00000312413 MPC2O95563 127 aa12.31□□□□□ -0.44
CLCN6-201ENST00000312413 HPP00738 406 aa12.31□□□□□ -0.44
CLCN6-201ENST00000312413 PRR35P0CG20 571 aa12.31□□□□□ -0.44
CLCN6-201ENST00000312413 FUT3P21217 361 aa12.31□□□□□ -0.44
CLCN6-201ENST00000312413 CD200P41217 278 aa12.31□□□□□ -0.44
CLCN6-201ENST00000312413 SPRY1O43609 319 aaPredicted RBP12.31□□□□□ -0.44
CLCN6-201ENST00000312413 TSPAN12O95859 305 aa12.31□□□□□ -0.44
CLCN6-201ENST00000312413 ONECUT2O95948 504 aa12.31□□□□□ -0.44
CLCN6-201ENST00000312413 TTRP02766 147 aa12.31□□□□□ -0.44
CLCN6-201ENST00000312413 SLC6A1P30531 599 aa12.31□□□□□ -0.44
CLCN6-201ENST00000312413 VN1R2Q8NFZ6 395 aa12.31□□□□□ -0.44
CLCN6-201ENST00000312413 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.31□□□□□ -0.44
CLCN6-201ENST00000312413 ROBO4Q8WZ75 1007 aa12.31□□□□□ -0.44
CLCN6-201ENST00000312413 RASL12Q9NYN1 266 aa12.31□□□□□ -0.44
CLCN6-201ENST00000312413 TRAV34A0A0B4J273 112 aa12.31□□□□□ -0.44
CLCN6-201ENST00000312413 SEMG1P04279 462 aa12.31□□□□□ -0.44
CLCN6-201ENST00000312413 GPM6AP51674 278 aa12.31□□□□□ -0.44
CLCN6-201ENST00000312413 CLDN15P56746 228 aa12.31□□□□□ -0.44
CLCN6-201ENST00000312413 SSX1Q16384 188 aa12.31□□□□□ -0.44
CLCN6-201ENST00000312413 IGSF11Q5DX21 431 aa12.31□□□□□ -0.44
CLCN6-201ENST00000312413 OR2M7Q8NG81 312 aa12.31□□□□□ -0.44
CLCN6-201ENST00000312413 ATOH1Q92858 354 aaPredicted RBP12.31□□□□□ -0.44
CLCN6-201ENST00000312413 MS4A4AQ96JQ5 239 aa12.31□□□□□ -0.44
CLCN6-201ENST00000312413 CD96P40200 585 aa12.31□□□□□ -0.44
CLCN6-201ENST00000312413 RAB32Q13637 225 aa12.31□□□□□ -0.44
CLCN6-201ENST00000312413 CEBPEQ15744 281 aa12.31□□□□□ -0.44
CLCN6-201ENST00000312413 SPNS2Q8IVW8 549 aa12.31□□□□□ -0.44
CLCN6-201ENST00000312413 EXTL1Q92935 676 aa12.31□□□□□ -0.44
CLCN6-201ENST00000312413 TMEM230Q96A57 120 aa12.31□□□□□ -0.44
CLCN6-201ENST00000312413 CXCL13O43927 109 aa12.31□□□□□ -0.44
CLCN6-201ENST00000312413 RAB7AP51149 207 aa12.31□□□□□ -0.44
CLCN6-201ENST00000312413 BET1LQ9NYM9 111 aa12.31□□□□□ -0.44
CLCN6-201ENST00000312413 FRG2CA6NGY1 282 aa12.3□□□□□ -0.44
CLCN6-201ENST00000312413 KIAA1324LA8MWY0 1029 aaPredicted RBP12.3□□□□□ -0.44
CLCN6-201ENST00000312413 DUS4LO95620 317 aaKnown RBP12.3□□□□□ -0.44
CLCN6-201ENST00000312413 GPANK1O95872 356 aa12.3□□□□□ -0.44
CLCN6-201ENST00000312413 CYC1P08574 325 aa12.3□□□□□ -0.44
CLCN6-201ENST00000312413 ASCL1P50553 236 aa12.3□□□□□ -0.44
CLCN6-201ENST00000312413 TMPRSS11FQ6ZWK6 438 aa12.3□□□□□ -0.44
CLCN6-201ENST00000312413 KCNE4Q8WWG9 221 aa12.3□□□□□ -0.44
CLCN6-201ENST00000312413 RAB40CQ96S21 281 aa12.3□□□□□ -0.44
CLCN6-201ENST00000312413 C9orf170A2RU37 121 aa12.3□□□□□ -0.44
CLCN6-201ENST00000312413 MAP1LC3B2A6NCE7 125 aa12.3□□□□□ -0.44
CLCN6-201ENST00000312413 M0R143 59 aa12.3□□□□□ -0.44
CLCN6-201ENST00000312413 MVB12AQ96EY5 273 aa12.3□□□□□ -0.44
CLCN6-201ENST00000312413 POM121L2Q96KW2 1035 aa12.3□□□□□ -0.44
CLCN6-201ENST00000312413 MAP1LC3BQ9GZQ8 125 aa12.3□□□□□ -0.44
CLCN6-201ENST00000312413 H0Y8X5 98 aa12.3□□□□□ -0.44
CLCN6-201ENST00000312413 GYPAP02724 150 aa12.3□□□□□ -0.44
CLCN6-201ENST00000312413 CCL11P51671 97 aa12.3□□□□□ -0.44
CLCN6-201ENST00000312413 SCAND1P57086 179 aa12.3□□□□□ -0.44
CLCN6-201ENST00000312413 NHLH1Q02575 133 aa12.3□□□□□ -0.44
CLCN6-201ENST00000312413 NHLH2Q02577 135 aa12.3□□□□□ -0.44
CLCN6-201ENST00000312413 PRDX4Q13162 271 aa12.3□□□□□ -0.44
CLCN6-201ENST00000312413 FFAR4Q5NUL3 377 aa12.3□□□□□ -0.44
CLCN6-201ENST00000312413 OR5C1Q8NGR4 320 aa12.3□□□□□ -0.44
CLCN6-201ENST00000312413 PATE1Q8WXA2 126 aa12.3□□□□□ -0.44
CLCN6-201ENST00000312413 SPSB1Q96BD6 273 aa12.3□□□□□ -0.44
CLCN6-201ENST00000312413 ZC3HAV1LQ96H79 300 aaKnown RBP12.3□□□□□ -0.44
CLCN6-201ENST00000312413 C19orf43Q9BQ61 176 aa12.3□□□□□ -0.44
CLCN6-201ENST00000312413 WDR61Q9GZS3 305 aaKnown RBP12.3□□□□□ -0.44
CLCN6-201ENST00000312413 LSM2Q9Y333 95 aaKnown RBP12.3□□□□□ -0.44
CLCN6-201ENST00000312413 HDGFL3Q9Y3E1 203 aa12.3□□□□□ -0.44
CLCN6-201ENST00000312413 A0A087WUJ7 227 aa12.3□□□□□ -0.44
CLCN6-201ENST00000312413 PMS2P1A4D2B8 440 aa12.3□□□□□ -0.44
CLCN6-201ENST00000312413 FCN1O00602 326 aa12.3□□□□□ -0.44
CLCN6-201ENST00000312413 CRYAAP02489 173 aa12.3□□□□□ -0.44
CLCN6-201ENST00000312413 ZNF77Q15935 545 aa12.3□□□□□ -0.44
CLCN6-201ENST00000312413 DMRTC1Q5HYR2 192 aa12.3□□□□□ -0.44
CLCN6-201ENST00000312413 VWA1Q6PCB0 445 aa12.3□□□□□ -0.44
CLCN6-201ENST00000312413 PRSS54Q6PEW0 395 aa12.3□□□□□ -0.44
CLCN6-201ENST00000312413 FBXL14Q8N1E6 418 aa12.3□□□□□ -0.44
CLCN6-201ENST00000312413 ADPRHL1Q8NDY3 354 aa12.3□□□□□ -0.44
CLCN6-201ENST00000312413 PELI1Q96FA3 418 aa12.3□□□□□ -0.44
CLCN6-201ENST00000312413 ACY3Q96HD9 319 aa12.3□□□□□ -0.44
CLCN6-201ENST00000312413 SLC6A13Q9NSD5 602 aa12.3□□□□□ -0.44
CLCN6-201ENST00000312413 SIGLEC7Q9Y286 467 aa12.3□□□□□ -0.44
CLCN6-201ENST00000312413 CACNA1CQ13936 2221 aa12.3□□□□□ -0.44
CLCN6-201ENST00000312413 ASPDHA6ND91 283 aa12.29□□□□□ -0.44
CLCN6-201ENST00000312413 IGLV3-27P01718 113 aa12.29□□□□□ -0.44
CLCN6-201ENST00000312413 SLC25A1P53007 311 aa12.29□□□□□ -0.44
CLCN6-201ENST00000312413 DUSP2Q05923 314 aa12.29□□□□□ -0.44
CLCN6-201ENST00000312413 Q7L0L9 218 aa12.29□□□□□ -0.44
CLCN6-201ENST00000312413 DUSP18Q8NEJ0 188 aa12.29□□□□□ -0.44
CLCN6-201ENST00000312413 OR6S1Q8NH40 331 aa12.29□□□□□ -0.44
CLCN6-201ENST00000312413 TAAR9Q96RI9 348 aa12.29□□□□□ -0.44
CLCN6-201ENST00000312413 LRFN3Q9BTN0 628 aa12.29□□□□□ -0.44
CLCN6-201ENST00000312413 PRKNO60260 465 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms