RNA–Protein interactions for RNA: ENST00000309836.9

SPIRE1-201, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2 BASIC

Gene SPIRE1, Length 1,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-201ENST00000309836 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.34□□□□□ -0.27
SPIRE1-201ENST00000309836 FOXD3Q9UJU5 478 aaPredicted RBP13.34□□□□□ -0.27
SPIRE1-201ENST00000309836 DKKL1Q9UK85 242 aa13.34□□□□□ -0.27
SPIRE1-201ENST00000309836 FLVCR1Q9Y5Y0 555 aa13.34□□□□□ -0.27
SPIRE1-201ENST00000309836 TMEM265A0A087WTH1 108 aa13.33□□□□□ -0.27
SPIRE1-201ENST00000309836 TRBV6-7A0A0A0MS04 114 aa13.33□□□□□ -0.27
SPIRE1-201ENST00000309836 A0A0J9YW62 118 aa13.33□□□□□ -0.27
SPIRE1-201ENST00000309836 NPIPA2E9PIF3 369 aa13.33□□□□□ -0.27
SPIRE1-201ENST00000309836 NPIPA3F8WFD2 350 aa13.33□□□□□ -0.27
SPIRE1-201ENST00000309836 H0YIZ8 118 aa13.33□□□□□ -0.27
SPIRE1-201ENST00000309836 STMND1H3BQB6 276 aa13.33□□□□□ -0.27
SPIRE1-201ENST00000309836 BET1O15155 118 aa13.33□□□□□ -0.27
SPIRE1-201ENST00000309836 DBHP09172 617 aa13.33□□□□□ -0.27
SPIRE1-201ENST00000309836 OTX1P32242 354 aaPredicted RBP13.33□□□□□ -0.27
SPIRE1-201ENST00000309836 SSR4P51571 173 aa13.33□□□□□ -0.27
SPIRE1-201ENST00000309836 CLEC18BQ6UXF7 455 aa13.33□□□□□ -0.27
SPIRE1-201ENST00000309836 ARMC10Q8N2F6 343 aa13.33□□□□□ -0.27
SPIRE1-201ENST00000309836 MAFIPQ8WZ33 124 aa13.33□□□□□ -0.27
SPIRE1-201ENST00000309836 ARPC5LQ9BPX5 153 aa13.33□□□□□ -0.27
SPIRE1-201ENST00000309836 NAA11Q9BSU3 229 aaPredicted RBP13.33□□□□□ -0.27
SPIRE1-201ENST00000309836 SRXN1Q9BYN0 137 aa13.33□□□□□ -0.27
SPIRE1-201ENST00000309836 NMES1Q9C002 83 aa13.33□□□□□ -0.27
SPIRE1-201ENST00000309836 A0A1B0GW55 424 aa13.33□□□□□ -0.28
SPIRE1-201ENST00000309836 F5H0A9 414 aaPredicted RBP13.33□□□□□ -0.28
SPIRE1-201ENST00000309836 SIGLEC5O15389 551 aa13.33□□□□□ -0.28
SPIRE1-201ENST00000309836 EIF1BO60739 113 aaKnown RBP13.33□□□□□ -0.28
SPIRE1-201ENST00000309836 DUX4L2P0CJ85 424 aa13.33□□□□□ -0.28
SPIRE1-201ENST00000309836 DUX4L3P0CJ86 424 aa13.33□□□□□ -0.28
SPIRE1-201ENST00000309836 DUX4L4P0CJ87 422 aa13.33□□□□□ -0.28
SPIRE1-201ENST00000309836 DUX4L5P0CJ88 424 aa13.33□□□□□ -0.28
SPIRE1-201ENST00000309836 DUX4L6P0CJ89 424 aa13.33□□□□□ -0.28
SPIRE1-201ENST00000309836 DUX4L7P0CJ90 424 aa13.33□□□□□ -0.28
SPIRE1-201ENST00000309836 FCGR2AP12318 317 aa13.33□□□□□ -0.28
SPIRE1-201ENST00000309836 PRKACBP22694 351 aa13.33□□□□□ -0.28
SPIRE1-201ENST00000309836 GUCA1AP43080 201 aaPredicted RBP13.33□□□□□ -0.28
SPIRE1-201ENST00000309836 SUCLG1P53597 346 aaKnown RBP13.33□□□□□ -0.28
SPIRE1-201ENST00000309836 SIGLEC14Q08ET2 396 aa13.33□□□□□ -0.28
SPIRE1-201ENST00000309836 FAM189A2Q15884 450 aa13.33□□□□□ -0.28
SPIRE1-201ENST00000309836 ANKRD55Q3KP44 614 aa13.33□□□□□ -0.28
SPIRE1-201ENST00000309836 AADACL3Q5VUY0 350 aa13.33□□□□□ -0.28
SPIRE1-201ENST00000309836 ATRAIDQ6UW56 229 aa13.33□□□□□ -0.28
SPIRE1-201ENST00000309836 PNLDC1Q8NA58 520 aaKnown RBP13.33□□□□□ -0.28
SPIRE1-201ENST00000309836 INO80EQ8NBZ0 244 aaPredicted RBP13.33□□□□□ -0.28
SPIRE1-201ENST00000309836 PIGTQ969N2 578 aa13.33□□□□□ -0.28
SPIRE1-201ENST00000309836 FBXO17Q96EF6 278 aa13.33□□□□□ -0.28
SPIRE1-201ENST00000309836 ZNF837Q96EG3 531 aaPredicted RBP13.33□□□□□ -0.28
SPIRE1-201ENST00000309836 RRNAD1Q96FB5 475 aaKnown RBP13.33□□□□□ -0.28
SPIRE1-201ENST00000309836 JSRP1Q96MG2 331 aaPredicted RBP13.33□□□□□ -0.28
SPIRE1-201ENST00000309836 MICU1Q9BPX6 476 aa13.33□□□□□ -0.28
SPIRE1-201ENST00000309836 ST6GALNAC5Q9BVH7 336 aa13.33□□□□□ -0.28
SPIRE1-201ENST00000309836 RBM24Q9BX46 236 aaKnown RBP13.33□□□□□ -0.28
SPIRE1-201ENST00000309836 FAM117AQ9C073 453 aa13.33□□□□□ -0.28
SPIRE1-201ENST00000309836 CHST5Q9GZS9 411 aa13.33□□□□□ -0.28
SPIRE1-201ENST00000309836 DNTTIP1Q9H147 329 aa13.33□□□□□ -0.28
SPIRE1-201ENST00000309836 GHRLQ9UBU3 117 aa13.33□□□□□ -0.28
SPIRE1-201ENST00000309836 DUX4Q9UBX2 424 aa13.33□□□□□ -0.28
SPIRE1-201ENST00000309836 PIGLQ9Y2B2 252 aa13.33□□□□□ -0.28
SPIRE1-201ENST00000309836 A0A0B4J2A0 478 aa13.32□□□□□ -0.28
SPIRE1-201ENST00000309836 TEX13DA0A0J9YY54 714 aaPredicted RBP13.32□□□□□ -0.28
SPIRE1-201ENST00000309836 F8VVB4 439 aa13.32□□□□□ -0.28
SPIRE1-201ENST00000309836 F8VWA3 439 aa13.32□□□□□ -0.28
SPIRE1-201ENST00000309836 SDCBPO00560 298 aaPredicted RBP13.32□□□□□ -0.28
SPIRE1-201ENST00000309836 NTN3O00634 580 aaPredicted RBP13.32□□□□□ -0.28
SPIRE1-201ENST00000309836 TNFSF11O14788 317 aa13.32□□□□□ -0.28
SPIRE1-201ENST00000309836 ADAP1O75689 374 aa13.32□□□□□ -0.28
SPIRE1-201ENST00000309836 HTR3BO95264 441 aa13.32□□□□□ -0.28
SPIRE1-201ENST00000309836 CFIP05156 583 aa13.32□□□□□ -0.28
SPIRE1-201ENST00000309836 SERPINA2P20848 420 aa13.32□□□□□ -0.28
SPIRE1-201ENST00000309836 CNR1P21554 472 aa13.32□□□□□ -0.28
SPIRE1-201ENST00000309836 BLVRBP30043 206 aaPredicted RBP13.32□□□□□ -0.28
SPIRE1-201ENST00000309836 SNU13P55769 128 aaKnown RBP13.32□□□□□ -0.28
SPIRE1-201ENST00000309836 MLF1P58340 268 aa13.32□□□□□ -0.28
SPIRE1-201ENST00000309836 CSNK2A1P68400 391 aaPredicted RBP13.32□□□□□ -0.28
SPIRE1-201ENST00000309836 SNTB1Q13884 538 aaKnown RBP13.32□□□□□ -0.28
SPIRE1-201ENST00000309836 ZNF468Q5VIY5 522 aaPredicted RBP13.32□□□□□ -0.28
SPIRE1-201ENST00000309836 ELP2Q6IA86 826 aa13.32□□□□□ -0.28
SPIRE1-201ENST00000309836 SLC16A14Q7RTX9 510 aa13.32□□□□□ -0.28
SPIRE1-201ENST00000309836 C20orf196Q8IYI0 205 aa13.32□□□□□ -0.28
SPIRE1-201ENST00000309836 BHLHE23Q8NDY6 225 aa13.32□□□□□ -0.28
SPIRE1-201ENST00000309836 CSNK2A3Q8NEV1 391 aa13.32□□□□□ -0.28
SPIRE1-201ENST00000309836 OR5AP2Q8NGF4 316 aa13.32□□□□□ -0.28
SPIRE1-201ENST00000309836 DCUN1D4Q92564 292 aa13.32□□□□□ -0.28
SPIRE1-201ENST00000309836 TM2D1Q9BX74 207 aa13.32□□□□□ -0.28
SPIRE1-201ENST00000309836 SHPKQ9UHJ6 478 aa13.32□□□□□ -0.28
SPIRE1-201ENST00000309836 KIAA1549Q9HCM3 1950 aa13.32□□□□□ -0.28
SPIRE1-201ENST00000309836 M0R135 149 aa13.31□□□□□ -0.28
SPIRE1-201ENST00000309836 TSPAN4O14817 238 aa13.31□□□□□ -0.28
SPIRE1-201ENST00000309836 VAMP5O95183 116 aa13.31□□□□□ -0.28
SPIRE1-201ENST00000309836 KLK3P07288 261 aaPredicted RBP13.31□□□□□ -0.28
SPIRE1-201ENST00000309836 GP1BAP07359 652 aa13.31□□□□□ -0.28
SPIRE1-201ENST00000309836 PGAM2P15259 253 aa13.31□□□□□ -0.28
SPIRE1-201ENST00000309836 RPS2P15880 293 aaKnown RBP13.31□□□□□ -0.28
SPIRE1-201ENST00000309836 PAN3Q58A45 887 aaKnown RBP13.31□□□□□ -0.28
SPIRE1-201ENST00000309836 UNQ6126/PRO20091Q6UXV3 157 aa13.31□□□□□ -0.28
SPIRE1-201ENST00000309836 ZSCAN4Q8NAM6 433 aaPredicted RBP13.31□□□□□ -0.28
SPIRE1-201ENST00000309836 BPIFCQ8NFQ6 507 aa13.31□□□□□ -0.28
SPIRE1-201ENST00000309836 LHFPL5Q8TAF8 219 aa13.31□□□□□ -0.28
SPIRE1-201ENST00000309836 PP6455Q8WZ26 134 aa13.31□□□□□ -0.28
SPIRE1-201ENST00000309836 PIK3IP1Q96FE7 263 aa13.31□□□□□ -0.28
SPIRE1-201ENST00000309836 ZNF799Q96GE5 643 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms