RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 CST11Q9H112 138 aa18.45■□□□□ 0.54
ATG4D-201ENST00000309469 OR51J1Q9H342 316 aa18.45■□□□□ 0.54
ATG4D-201ENST00000309469 C5orf49A4QMS7 147 aa18.45■□□□□ 0.54
ATG4D-201ENST00000309469 NDUFB6O95139 128 aa18.45■□□□□ 0.54
ATG4D-201ENST00000309469 CCNOP22674 350 aa18.45■□□□□ 0.54
ATG4D-201ENST00000309469 TAS2R19P59542 299 aa18.45■□□□□ 0.54
ATG4D-201ENST00000309469 CNN3Q15417 329 aaKnown RBP18.45■□□□□ 0.54
ATG4D-201ENST00000309469 OR8B8Q15620 311 aa18.45■□□□□ 0.54
ATG4D-201ENST00000309469 HIKESHIQ53FT3 197 aa18.45■□□□□ 0.54
ATG4D-201ENST00000309469 SNIP1Q8TAD8 396 aaKnown RBP18.45■□□□□ 0.54
ATG4D-201ENST00000309469 DVL3Q92997 716 aaPredicted RBP18.45■□□□□ 0.54
ATG4D-201ENST00000309469 URM1Q9BTM9 101 aaKnown RBP18.45■□□□□ 0.54
ATG4D-201ENST00000309469 ZNF107Q9UII5 783 aaPredicted RBP18.45■□□□□ 0.54
ATG4D-201ENST00000309469 CCL2P13500 99 aa18.44■□□□□ 0.54
ATG4D-201ENST00000309469 GNB3P16520 340 aa18.44■□□□□ 0.54
ATG4D-201ENST00000309469 PRKACBP22694 351 aa18.44■□□□□ 0.54
ATG4D-201ENST00000309469 MTCP1P56278 107 aa18.44■□□□□ 0.54
ATG4D-201ENST00000309469 PLP2Q04941 152 aa18.44■□□□□ 0.54
ATG4D-201ENST00000309469 FJX1Q86VR8 437 aa18.44■□□□□ 0.54
ATG4D-201ENST00000309469 OR5M9Q8NGP3 310 aa18.44■□□□□ 0.54
ATG4D-201ENST00000309469 ARPC1BO15143 372 aaKnown RBP18.43■□□□□ 0.54
ATG4D-201ENST00000309469 ICMTO60725 284 aa18.43■□□□□ 0.54
ATG4D-201ENST00000309469 NRASP01111 189 aa18.43■□□□□ 0.54
ATG4D-201ENST00000309469 FCN2Q15485 313 aa18.43■□□□□ 0.54
ATG4D-201ENST00000309469 CD276Q5ZPR3 534 aa18.43■□□□□ 0.54
ATG4D-201ENST00000309469 DACT3Q96B18 629 aaPredicted RBP18.43■□□□□ 0.54
ATG4D-201ENST00000309469 POM121L2Q96KW2 1035 aa18.43■□□□□ 0.54
ATG4D-201ENST00000309469 S100A13Q99584 98 aa18.43■□□□□ 0.54
ATG4D-201ENST00000309469 SOCS1O15524 211 aa18.43■□□□□ 0.54
ATG4D-201ENST00000309469 CYB5AP00167 134 aa18.43■□□□□ 0.54
ATG4D-201ENST00000309469 RCVRNP35243 200 aa18.43■□□□□ 0.54
ATG4D-201ENST00000309469 RPS27AP62979 156 aaKnown RBP18.43■□□□□ 0.54
ATG4D-201ENST00000309469 FOXC1Q12948 553 aa18.43■□□□□ 0.54
ATG4D-201ENST00000309469 ST3GAL2Q16842 350 aa18.43■□□□□ 0.54
ATG4D-201ENST00000309469 TFAP2EQ6VUC0 442 aa18.43■□□□□ 0.54
ATG4D-201ENST00000309469 Q6ZS92 163 aa18.43■□□□□ 0.54
ATG4D-201ENST00000309469 FAM214BQ7L5A3 538 aa18.43■□□□□ 0.54
ATG4D-201ENST00000309469 TRAPPC6BQ86SZ2 158 aa18.43■□□□□ 0.54
ATG4D-201ENST00000309469 ZNF584Q8IVC4 421 aa18.43■□□□□ 0.54
ATG4D-201ENST00000309469 GCNT2Q8N0V5 402 aa18.43■□□□□ 0.54
ATG4D-201ENST00000309469 OR56B1Q8NGI3 324 aa18.43■□□□□ 0.54
ATG4D-201ENST00000309469 BEX1Q9HBH7 125 aa18.43■□□□□ 0.54
ATG4D-201ENST00000309469 FAM230AA0A1W2PPH8 454 aa18.42■□□□□ 0.54
ATG4D-201ENST00000309469 PRAF2O60831 178 aa18.42■□□□□ 0.54
ATG4D-201ENST00000309469 SPINK2P20155 84 aa18.42■□□□□ 0.54
ATG4D-201ENST00000309469 ZP1P60852 638 aa18.42■□□□□ 0.54
ATG4D-201ENST00000309469 GUSBP1Q15486 140 aa18.42■□□□□ 0.54
ATG4D-201ENST00000309469 FAM89BQ8N5H3 189 aa18.42■□□□□ 0.54
ATG4D-201ENST00000309469 BEST4Q8NFU0 473 aa18.42■□□□□ 0.54
ATG4D-201ENST00000309469 APOBEC3DQ96AK3 386 aaPredicted RBP18.42■□□□□ 0.54
ATG4D-201ENST00000309469 RAB3CQ96E17 227 aa18.42■□□□□ 0.54
ATG4D-201ENST00000309469 CPNE2Q96FN4 548 aaPredicted RBP18.42■□□□□ 0.54
ATG4D-201ENST00000309469 ZNF816-ZNF321PA0A0X1KG74 233 aa18.41■□□□□ 0.54
ATG4D-201ENST00000309469 RAB3DO95716 219 aa18.41■□□□□ 0.54
ATG4D-201ENST00000309469 C1QBP02746 253 aa18.41■□□□□ 0.54
ATG4D-201ENST00000309469 MGMTP16455 207 aa18.41■□□□□ 0.54
ATG4D-201ENST00000309469 RBMS2Q15434 407 aaKnown RBP18.41■□□□□ 0.54
ATG4D-201ENST00000309469 PLAC9Q5JTB6 97 aa18.41■□□□□ 0.54
ATG4D-201ENST00000309469 ZBTB37Q5TC79 503 aa18.41■□□□□ 0.54
ATG4D-201ENST00000309469 RTN4RL2Q86UN3 420 aa18.41■□□□□ 0.54
ATG4D-201ENST00000309469 OR51S1Q8NGJ8 323 aa18.41■□□□□ 0.54
ATG4D-201ENST00000309469 OR10K1Q8NGX5 313 aa18.41■□□□□ 0.54
ATG4D-201ENST00000309469 NANOS1Q8WY41 292 aaKnown RBP18.41■□□□□ 0.54
ATG4D-201ENST00000309469 WNT2BQ93097 391 aa18.41■□□□□ 0.54
ATG4D-201ENST00000309469 REPIN1Q9BWE0 567 aaKnown RBP18.41■□□□□ 0.54
ATG4D-201ENST00000309469 FREM1Q5H8C1 2179 aa18.41■□□□□ 0.54
ATG4D-201ENST00000309469 ZNF736B4DX44 427 aaPredicted RBP18.41■□□□□ 0.54
ATG4D-201ENST00000309469 PDGFAP04085 211 aa18.41■□□□□ 0.54
ATG4D-201ENST00000309469 GSTP1P09211 210 aaKnown RBP18.41■□□□□ 0.54
ATG4D-201ENST00000309469 TMEM225BP0DP42 221 aa18.41■□□□□ 0.54
ATG4D-201ENST00000309469 RBP2P50120 134 aa18.41■□□□□ 0.54
ATG4D-201ENST00000309469 TMEM50BP56557 158 aa18.41■□□□□ 0.54
ATG4D-201ENST00000309469 IFITM2Q01629 132 aa18.41■□□□□ 0.54
ATG4D-201ENST00000309469 LHFPL2Q6ZUX7 228 aa18.41■□□□□ 0.54
ATG4D-201ENST00000309469 LIX1LQ8IVB5 337 aa18.41■□□□□ 0.54
ATG4D-201ENST00000309469 STEAP2Q8NFT2 490 aa18.41■□□□□ 0.54
ATG4D-201ENST00000309469 OR11H7Q8NGC8 314 aa18.41■□□□□ 0.54
ATG4D-201ENST00000309469 OR51T1Q8NGJ9 327 aa18.41■□□□□ 0.54
ATG4D-201ENST00000309469 NUDCD2Q8WVJ2 157 aa18.41■□□□□ 0.54
ATG4D-201ENST00000309469 BORCS8Q96FH0 119 aa18.41■□□□□ 0.54
ATG4D-201ENST00000309469 ELL3Q9HB65 397 aaPredicted RBP18.41■□□□□ 0.54
ATG4D-201ENST00000309469 RTTNQ86VV8 2226 aa18.4■□□□□ 0.54
ATG4D-201ENST00000309469 IGKV1-27A0A075B6S5 117 aa18.4■□□□□ 0.54
ATG4D-201ENST00000309469 A0A1B0GUH1 482 aa18.4■□□□□ 0.54
ATG4D-201ENST00000309469 AHRRA9YTQ3 701 aa18.4■□□□□ 0.54
ATG4D-201ENST00000309469 CD74P04233 296 aa18.4■□□□□ 0.54
ATG4D-201ENST00000309469 HIST1H1DP16402 221 aaKnown RBP18.4■□□□□ 0.54
ATG4D-201ENST00000309469 SERPINA2P20848 420 aa18.4■□□□□ 0.54
ATG4D-201ENST00000309469 ERP29P30040 261 aaKnown RBP18.4■□□□□ 0.54
ATG4D-201ENST00000309469 MECP2P51608 486 aaKnown RBP18.4■□□□□ 0.54
ATG4D-201ENST00000309469 MALLQ13021 153 aa18.4■□□□□ 0.54
ATG4D-201ENST00000309469 GK2Q14410 553 aaPredicted RBP18.4■□□□□ 0.54
ATG4D-201ENST00000309469 MOB3CQ70IA8 216 aa18.4■□□□□ 0.54
ATG4D-201ENST00000309469 C9orf106Q8NAJ2 232 aa18.4■□□□□ 0.54
ATG4D-201ENST00000309469 PIGCQ92535 297 aa18.4■□□□□ 0.54
ATG4D-201ENST00000309469 GINS4Q9BRT9 223 aa18.4■□□□□ 0.54
ATG4D-201ENST00000309469 KCNN3Q9UGI6 736 aa18.4■□□□□ 0.54
ATG4D-201ENST00000309469 ASPMQ8IZT6 3477 aa18.4■□□□□ 0.54
ATG4D-201ENST00000309469 CEP250Q9BV73 2442 aa18.39■□□□□ 0.54
ATG4D-201ENST00000309469 M0QYG6 137 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms