RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 OR5M9Q8NGP3 310 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 OR2G2Q8NGZ5 317 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 ZCCHC10Q8TBK6 192 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 MCHR2Q969V1 340 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 C14orf79Q96F83 325 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 PHYHIPLQ96FC7 376 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 ADAD1Q96M93 576 aaKnown RBP4.3□□□□□ -1.72
CKS1B-201ENST00000308987 NMNAT3Q96T66 252 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 PDCD1LG2Q9BQ51 273 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 SEC22CQ9BRL7 303 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 POTEKPQ9BYX7 375 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 WDR76Q9H967 626 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 NKIRAS2Q9NYR9 191 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 RNF7Q9UBF6 113 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 KLK11Q9UBX7 282 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 ZNF69Q9UC07 566 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 PRODH2Q9UF12 536 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 MRM2Q9UI43 246 aaKnown RBP4.3□□□□□ -1.72
CKS1B-201ENST00000308987 FLVCR2Q9UPI3 526 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 ERVK-19Q9WJR5 959 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 PLEKHA6Q9Y2H5 1048 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 MEMO1Q9Y316 297 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 EXPH5Q8NEV8 1989 aa4.3□□□□□ -1.72
CKS1B-201ENST00000308987 PCNX3Q9H6A9 2034 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 IGKV1D-42A0A075B6H8 117 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 A0A0A6YYC8 382 aaPredicted RBP4.29□□□□□ -1.72
CKS1B-201ENST00000308987 NPIPA5A0A0B4J1W7 369 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 CIB4A0PJX0 185 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 NPIPA7E9PJI5 369 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 NPIPA5E9PKD4 350 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 I3L1I5 382 aaPredicted RBP4.29□□□□□ -1.72
CKS1B-201ENST00000308987 CLDN4O14493 209 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 SELENOFO60613 162 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 SCGNO76038 276 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 NEURL1O76050 574 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 OR2F2O95006 317 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 RENP00797 406 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 IGKV1D-16P01601 117 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 CRYABP02511 175 aaKnown RBP4.29□□□□□ -1.72
CKS1B-201ENST00000308987 ASAH2BP0C7U1 165 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 NPIPA8P0DM63 369 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 ADRA2CP18825 462 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 ALOX5APP20292 161 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 IL32P24001 234 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 DCTDP32321 178 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 PSMB10P40306 273 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 CDKN2AP42771 156 aaKnown RBP4.29□□□□□ -1.72
CKS1B-201ENST00000308987 SLC6A8P48029 635 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 HCCSP53701 268 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 HSD17B7P56937 341 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 TAS2R19P59542 299 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 ERVK-25P63136 954 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 NHLH2Q02577 135 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 OR2F1Q13607 317 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 SERTAD2Q14140 314 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 FAM53BQ14153 422 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 ZNF345Q14585 488 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 ZNF273Q14593 569 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 RAB11BQ15907 218 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 ZNF74Q16587 644 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 RNASE12Q5GAN4 147 aaKnown RBP4.29□□□□□ -1.72
CKS1B-201ENST00000308987 TEX30Q5JUR7 227 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 ACER2Q5QJU3 275 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 EEF1A1P5Q5VTE0 462 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 LIPNQ5VXI9 398 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 GLT8D1Q68CQ7 371 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 SPINK14Q6IE38 97 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 FAM166AQ6J272 317 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 LIN54Q6MZP7 749 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 FAHD2BQ6P2I3 314 aaPredicted RBP4.29□□□□□ -1.72
CKS1B-201ENST00000308987 LEG1Q6P5S2 330 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 TMEM81Q6P7N7 255 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 UQCC3Q6UW78 93 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 C5orf46Q6UWT4 87 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 ARSKQ6UWY0 536 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 GSG1LQ6UXU4 331 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 MEX3BQ6ZN04 569 aaKnown RBP4.29□□□□□ -1.72
CKS1B-201ENST00000308987 ESPNLQ6ZVH7 1005 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 IQCF2Q8IXL9 164 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 CCDC36Q8IYA8 594 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 PM20D2Q8IYS1 436 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 IZUMO1Q8IYV9 350 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 BEST3Q8N1M1 668 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 RFLNBQ8N5W9 214 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 ZNF676Q8N7Q3 588 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 OR4C16Q8NGL9 310 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 OR6K6Q8NGW6 343 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 OR6S1Q8NH40 331 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 GPX8Q8TED1 209 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 RIT1Q92963 219 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 FAHD2AQ96GK7 314 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 C4orf45Q96LM5 186 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 VN1R1Q9GZP7 353 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 LIME1Q9H400 295 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 FKRPQ9H9S5 495 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 MMP25Q9NPA2 562 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 C12orf4Q9NQ89 552 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 UBQLN4Q9NRR5 601 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 CA10Q9NS85 328 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 LAMP5Q9UJQ1 280 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms