RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 MPC1Q9Y5U8 109 aa16.43■□□□□ 0.22
PDZRN3-202ENST00000308537 TRAV40A0A0B4J280 105 aa16.42■□□□□ 0.22
PDZRN3-202ENST00000308537 hCG_1807616A0A1W2PRN6 198 aa16.42■□□□□ 0.22
PDZRN3-202ENST00000308537 ACOD1A6NK06 481 aa16.42■□□□□ 0.22
PDZRN3-202ENST00000308537 ZNF850A8MQ14 1090 aa16.42■□□□□ 0.22
PDZRN3-202ENST00000308537 TRIM77I1YAP6 450 aa16.42■□□□□ 0.22
PDZRN3-202ENST00000308537 CDIPTO14735 213 aa16.42■□□□□ 0.22
PDZRN3-202ENST00000308537 MAGEB4O15481 346 aaPredicted RBP16.42■□□□□ 0.22
PDZRN3-202ENST00000308537 NDUFA2O43678 99 aa16.42■□□□□ 0.22
PDZRN3-202ENST00000308537 FGF12P61328 243 aa16.42■□□□□ 0.22
PDZRN3-202ENST00000308537 LCN1P1Q5VSP4 162 aa16.42■□□□□ 0.22
PDZRN3-202ENST00000308537 TBX15Q96SF7 602 aa16.42■□□□□ 0.22
PDZRN3-202ENST00000308537 PKP2Q99959 881 aa16.42■□□□□ 0.22
PDZRN3-202ENST00000308537 GABARAPL3Q9BY60 117 aa16.42■□□□□ 0.22
PDZRN3-202ENST00000308537 OAZ3Q9UMX2 235 aa16.42■□□□□ 0.22
PDZRN3-202ENST00000308537 TMEM269A0A1B0GVZ9 245 aa16.41■□□□□ 0.22
PDZRN3-202ENST00000308537 E9PQ18 207 aa16.41■□□□□ 0.22
PDZRN3-202ENST00000308537 ENSAO43768 121 aaKnown RBP16.41■□□□□ 0.22
PDZRN3-202ENST00000308537 ZNF254O75437 659 aa16.41■□□□□ 0.22
PDZRN3-202ENST00000308537 IL5RAQ01344 420 aa16.41■□□□□ 0.22
PDZRN3-202ENST00000308537 KCNJ8Q15842 424 aa16.41■□□□□ 0.22
PDZRN3-202ENST00000308537 KCTD18Q6PI47 426 aaPredicted RBP16.41■□□□□ 0.22
PDZRN3-202ENST00000308537 RPL3LQ92901 407 aaKnown RBP16.41■□□□□ 0.22
PDZRN3-202ENST00000308537 IL4I1Q96RQ9 567 aa16.41■□□□□ 0.22
PDZRN3-202ENST00000308537 CNN2Q99439 309 aaKnown RBP16.41■□□□□ 0.22
PDZRN3-202ENST00000308537 OSBPL10Q9BXB5 764 aa16.41■□□□□ 0.22
PDZRN3-202ENST00000308537 PBOV1Q9GZY1 135 aa16.41■□□□□ 0.22
PDZRN3-202ENST00000308537 WDR13Q9H1Z4 485 aa16.41■□□□□ 0.22
PDZRN3-202ENST00000308537 SEMA6AQ9H2E6 1030 aa16.41■□□□□ 0.22
PDZRN3-202ENST00000308537 PRDM13Q9H4Q3 707 aa16.41■□□□□ 0.22
PDZRN3-202ENST00000308537 TRIM36Q9NQ86 728 aa16.41■□□□□ 0.22
PDZRN3-202ENST00000308537 ERVK-18Q9QC07 812 aa16.41■□□□□ 0.22
PDZRN3-202ENST00000308537 NUFIP1Q9UHK0 495 aaKnown RBP16.41■□□□□ 0.22
PDZRN3-202ENST00000308537 TRRAPQ9Y4A5 3859 aa16.4■□□□□ 0.22
PDZRN3-202ENST00000308537 DNAJC9-AS1A6NH13 148 aa16.4■□□□□ 0.22
PDZRN3-202ENST00000308537 SLC22A31A6NKX4 558 aa16.4■□□□□ 0.22
PDZRN3-202ENST00000308537 H3BNX3 289 aa16.4■□□□□ 0.22
PDZRN3-202ENST00000308537 DVL1O14640 695 aa16.4■□□□□ 0.22
PDZRN3-202ENST00000308537 TTRP02766 147 aa16.4■□□□□ 0.22
PDZRN3-202ENST00000308537 SFTPBP07988 381 aa16.4■□□□□ 0.22
PDZRN3-202ENST00000308537 MUC1P15941 1255 aaPredicted RBP16.4■□□□□ 0.22
PDZRN3-202ENST00000308537 WDR38Q5JTN6 314 aa16.4■□□□□ 0.22
PDZRN3-202ENST00000308537 STUMQ69YW2 141 aa16.4■□□□□ 0.22
PDZRN3-202ENST00000308537 Q6ZSR3 168 aa16.4■□□□□ 0.22
PDZRN3-202ENST00000308537 SSX6Q7RTT6 188 aa16.4■□□□□ 0.22
PDZRN3-202ENST00000308537 SCCPDHQ8NBX0 429 aa16.4■□□□□ 0.22
PDZRN3-202ENST00000308537 OR10Z1Q8NGY1 313 aa16.4■□□□□ 0.22
PDZRN3-202ENST00000308537 ASB17Q8WXJ9 295 aa16.4■□□□□ 0.22
PDZRN3-202ENST00000308537 CENPNQ96H22 339 aaPredicted RBP16.4■□□□□ 0.22
PDZRN3-202ENST00000308537 TECTBQ96PL2 329 aa16.4■□□□□ 0.22
PDZRN3-202ENST00000308537 MICU1Q9BPX6 476 aa16.4■□□□□ 0.22
PDZRN3-202ENST00000308537 MROQ9BYG7 248 aa16.4■□□□□ 0.22
PDZRN3-202ENST00000308537 SIRPDQ9H106 197 aa16.4■□□□□ 0.22
PDZRN3-202ENST00000308537 GPR84Q9NQS5 396 aa16.4■□□□□ 0.22
PDZRN3-202ENST00000308537 MRM2Q9UI43 246 aaKnown RBP16.4■□□□□ 0.22
PDZRN3-202ENST00000308537 TMEM210A6NLX4 147 aa16.39■□□□□ 0.21
PDZRN3-202ENST00000308537 PRTN3P24158 256 aa16.39■□□□□ 0.21
PDZRN3-202ENST00000308537 CFPP27918 469 aa16.39■□□□□ 0.21
PDZRN3-202ENST00000308537 GNALP38405 381 aa16.39■□□□□ 0.21
PDZRN3-202ENST00000308537 TGM4P49221 684 aa16.39■□□□□ 0.21
PDZRN3-202ENST00000308537 CXCR4P61073 352 aa16.39■□□□□ 0.21
PDZRN3-202ENST00000308537 SNCBQ16143 134 aa16.39■□□□□ 0.21
PDZRN3-202ENST00000308537 DMRTC1Q5HYR2 192 aa16.39■□□□□ 0.21
PDZRN3-202ENST00000308537 ZNF684Q5T5D7 378 aa16.39■□□□□ 0.21
PDZRN3-202ENST00000308537 ATPAF1Q5TC12 328 aaPredicted RBP16.39■□□□□ 0.21
PDZRN3-202ENST00000308537 ZNF322Q6U7Q0 402 aaPredicted RBP16.39■□□□□ 0.21
PDZRN3-202ENST00000308537 SLC35F2Q8IXU6 374 aa16.39■□□□□ 0.21
PDZRN3-202ENST00000308537 FTMTQ8N4E7 242 aa16.39■□□□□ 0.21
PDZRN3-202ENST00000308537 OR51E1Q8TCB6 317 aa16.39■□□□□ 0.21
PDZRN3-202ENST00000308537 PIGCQ92535 297 aa16.39■□□□□ 0.21
PDZRN3-202ENST00000308537 C12orf43Q96C57 262 aaKnown RBP16.39■□□□□ 0.21
PDZRN3-202ENST00000308537 DUX5Q96PT3 197 aa16.39■□□□□ 0.21
PDZRN3-202ENST00000308537 CCL13Q99616 98 aa16.39■□□□□ 0.21
PDZRN3-202ENST00000308537 APOL4Q9BPW4 351 aa16.39■□□□□ 0.21
PDZRN3-202ENST00000308537 RTL8AQ9BWD3 113 aa16.39■□□□□ 0.21
PDZRN3-202ENST00000308537 PRRG3Q9BZD7 231 aa16.39■□□□□ 0.21
PDZRN3-202ENST00000308537 TMEM14AQ9Y6G1 99 aa16.39■□□□□ 0.21
PDZRN3-202ENST00000308537 MGAM2Q2M2H8 2515 aa16.39■□□□□ 0.21
PDZRN3-202ENST00000308537 ZNF816-ZNF321PA0A0X1KG74 233 aa16.38■□□□□ 0.21
PDZRN3-202ENST00000308537 A0A1B0GTI1 187 aa16.38■□□□□ 0.21
PDZRN3-202ENST00000308537 MDFIC2A0A1B0GVS7 189 aa16.38■□□□□ 0.21
PDZRN3-202ENST00000308537 ANXA2P2A6NMY6 339 aa16.38■□□□□ 0.21
PDZRN3-202ENST00000308537 ZNF879B4DU55 563 aa16.38■□□□□ 0.21
PDZRN3-202ENST00000308537 TMPRSS2O15393 492 aa16.38■□□□□ 0.21
PDZRN3-202ENST00000308537 SELLP14151 372 aa16.38■□□□□ 0.21
PDZRN3-202ENST00000308537 RIDAP52758 137 aaKnown RBP16.38■□□□□ 0.21
PDZRN3-202ENST00000308537 ACTR3P61158 418 aa16.38■□□□□ 0.21
PDZRN3-202ENST00000308537 C11orf91Q3C1V1 193 aa16.38■□□□□ 0.21
PDZRN3-202ENST00000308537 BRD3OSQ6XYD6 125 aa16.38■□□□□ 0.21
PDZRN3-202ENST00000308537 PLEKHG7Q6ZR37 379 aa16.38■□□□□ 0.21
PDZRN3-202ENST00000308537 BTN2A1Q7KYR7 527 aa16.38■□□□□ 0.21
PDZRN3-202ENST00000308537 ZDHHC23Q8IYP9 409 aa16.38■□□□□ 0.21
PDZRN3-202ENST00000308537 FAM216BQ8N7L0 139 aa16.38■□□□□ 0.21
PDZRN3-202ENST00000308537 LY6G5BQ8NDX9 201 aa16.38■□□□□ 0.21
PDZRN3-202ENST00000308537 PYDC1Q8WXC3 89 aa16.38■□□□□ 0.21
PDZRN3-202ENST00000308537 ITFG2Q969R8 447 aa16.38■□□□□ 0.21
PDZRN3-202ENST00000308537 RAB3IPQ96QF0 476 aaPredicted RBP16.38■□□□□ 0.21
PDZRN3-202ENST00000308537 OR51I2Q9H344 312 aa16.38■□□□□ 0.21
PDZRN3-202ENST00000308537 ABCB9Q9NP78 766 aa16.38■□□□□ 0.21
PDZRN3-202ENST00000308537 CLN6Q9NWW5 311 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms