RNA–Protein interactions for RNA: ENST00000308271.13

USP48-201, Transcript of ubiquitin specific peptidase 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP48, Length 4,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-201ENST00000308271 ZNF813Q6ZN06 617 aa17.28■□□□□ 0.36
USP48-201ENST00000308271 LMAN1LQ9HAT1 526 aa17.28■□□□□ 0.36
USP48-201ENST00000308271 OR2A4O95047 310 aa17.28■□□□□ 0.36
USP48-201ENST00000308271 ENPP1P22413 925 aa17.28■□□□□ 0.36
USP48-201ENST00000308271 PSG6Q00889 435 aa17.28■□□□□ 0.36
USP48-201ENST00000308271 SURF2Q15527 256 aaPredicted RBP17.28■□□□□ 0.36
USP48-201ENST00000308271 OR8G2PQ6IF36 304 aa17.28■□□□□ 0.36
USP48-201ENST00000308271 CLEC18BQ6UXF7 455 aa17.28■□□□□ 0.36
USP48-201ENST00000308271 OR10J5Q8NHC4 309 aa17.28■□□□□ 0.36
USP48-201ENST00000308271 SLC25A38Q96DW6 304 aa17.28■□□□□ 0.36
USP48-201ENST00000308271 ZNF845Q96IR2 970 aaPredicted RBP17.28■□□□□ 0.36
USP48-201ENST00000308271 OR2A7Q96R45 310 aa17.28■□□□□ 0.36
USP48-201ENST00000308271 MAGT1Q9H0U3 335 aa17.28■□□□□ 0.36
USP48-201ENST00000308271 A0A1W2PNR3 127 aa17.28■□□□□ 0.36
USP48-201ENST00000308271 A0A1W2PPH5 198 aa17.28■□□□□ 0.36
USP48-201ENST00000308271 ABHD16AO95870 558 aa17.28■□□□□ 0.36
USP48-201ENST00000308271 METTL15P1P0C7V9 234 aa17.28■□□□□ 0.36
USP48-201ENST00000308271 ADAM19Q9H013 955 aa17.28■□□□□ 0.36
USP48-201ENST00000308271 TBX21Q9UL17 535 aa17.28■□□□□ 0.36
USP48-201ENST00000308271 CCDC187A0A096LP49 1063 aa17.28■□□□□ 0.36
USP48-201ENST00000308271 SHISA3A0PJX4 238 aa17.28■□□□□ 0.36
USP48-201ENST00000308271 FAM221AA4D161 298 aa17.28■□□□□ 0.36
USP48-201ENST00000308271 SEC14L6B5MCN3 397 aa17.28■□□□□ 0.36
USP48-201ENST00000308271 EFNB2P52799 333 aa17.28■□□□□ 0.36
USP48-201ENST00000308271 FZD2Q14332 565 aa17.28■□□□□ 0.36
USP48-201ENST00000308271 MESTQ5EB52 335 aa17.28■□□□□ 0.36
USP48-201ENST00000308271 ZNF230Q9UIE0 474 aaPredicted RBP17.28■□□□□ 0.36
USP48-201ENST00000308271 EPPINO95925 133 aa17.27■□□□□ 0.36
USP48-201ENST00000308271 GDF1P27539 372 aa17.27■□□□□ 0.36
USP48-201ENST00000308271 GGNBP1Q5YKI7 109 aa17.27■□□□□ 0.36
USP48-201ENST00000308271 NCR3LG1Q68D85 454 aa17.27■□□□□ 0.36
USP48-201ENST00000308271 SLC39A7Q92504 469 aa17.27■□□□□ 0.36
USP48-201ENST00000308271 TMEM68Q96MH6 324 aa17.27■□□□□ 0.36
USP48-201ENST00000308271 OR51I2Q9H344 312 aa17.27■□□□□ 0.36
USP48-201ENST00000308271 CLDN34H7C241 214 aa17.27■□□□□ 0.36
USP48-201ENST00000308271 NRASP01111 189 aa17.27■□□□□ 0.36
USP48-201ENST00000308271 FABP4P15090 132 aa17.27■□□□□ 0.36
USP48-201ENST00000308271 SNCAP37840 140 aa17.27■□□□□ 0.36
USP48-201ENST00000308271 NPDC1Q9NQX5 325 aaPredicted RBP17.27■□□□□ 0.36
USP48-201ENST00000308271 TUSC2O75896 110 aa17.27■□□□□ 0.35
USP48-201ENST00000308271 RAB5AP20339 215 aa17.27■□□□□ 0.35
USP48-201ENST00000308271 NOVA1P51513 510 aaKnown RBP17.27■□□□□ 0.35
USP48-201ENST00000308271 SP6Q3SY56 376 aa17.27■□□□□ 0.35
USP48-201ENST00000308271 ABHD17BQ5VST6 288 aa17.27■□□□□ 0.35
USP48-201ENST00000308271 CBLN3Q6UW01 205 aa17.27■□□□□ 0.35
USP48-201ENST00000308271 GPR119Q8TDV5 335 aa17.27■□□□□ 0.35
USP48-201ENST00000308271 MRPS24Q96EL2 167 aaKnown RBP17.27■□□□□ 0.35
USP48-201ENST00000308271 STRADBQ9C0K7 418 aa17.27■□□□□ 0.35
USP48-201ENST00000308271 ACKR3P25106 362 aa17.26■□□□□ 0.35
USP48-201ENST00000308271 FMODQ06828 376 aa17.26■□□□□ 0.35
USP48-201ENST00000308271 GUCA2BQ16661 112 aa17.26■□□□□ 0.35
USP48-201ENST00000308271 AKR7LQ8NHP1 331 aa17.26■□□□□ 0.35
USP48-201ENST00000308271 MFRPQ9BY79 579 aa17.26■□□□□ 0.35
USP48-201ENST00000308271 IL13RA2Q14627 380 aa17.26■□□□□ 0.35
USP48-201ENST00000308271 ATG4DQ86TL0 474 aaPredicted RBP17.26■□□□□ 0.35
USP48-201ENST00000308271 ELSPBP1Q96BH3 223 aa17.26■□□□□ 0.35
USP48-201ENST00000308271 KCNIP2Q9NS61 270 aa17.26■□□□□ 0.35
USP48-201ENST00000308271 SERGEFQ9UGK8 458 aa17.26■□□□□ 0.35
USP48-201ENST00000308271 ASCC3Q8N3C0 2202 aaKnown RBP17.26■□□□□ 0.35
USP48-201ENST00000308271 FAHP16930 419 aa17.26■□□□□ 0.35
USP48-201ENST00000308271 SSR4P51571 173 aa17.26■□□□□ 0.35
USP48-201ENST00000308271 KISS1Q15726 138 aa17.26■□□□□ 0.35
USP48-201ENST00000308271 ZAR1Q86SH2 424 aa17.26■□□□□ 0.35
USP48-201ENST00000308271 OR13D1Q8NGV5 346 aa17.26■□□□□ 0.35
USP48-201ENST00000308271 ISOC2Q96AB3 205 aa17.26■□□□□ 0.35
USP48-201ENST00000308271 RPUSD4Q96CM3 377 aaKnown RBP17.26■□□□□ 0.35
USP48-201ENST00000308271 LAMP3Q9UQV4 416 aa17.26■□□□□ 0.35
USP48-201ENST00000308271 CARD18P57730 90 aa17.26■□□□□ 0.35
USP48-201ENST00000308271 TCTN1Q2MV58 587 aa17.26■□□□□ 0.35
USP48-201ENST00000308271 JMJD6Q6NYC1 403 aaPredicted RBP17.26■□□□□ 0.35
USP48-201ENST00000308271 ASB5Q8WWX0 329 aa17.26■□□□□ 0.35
USP48-201ENST00000308271 NRIP2Q9BQI9 281 aa17.26■□□□□ 0.35
USP48-201ENST00000308271 RSRP1Q9BUV0 290 aa17.26■□□□□ 0.35
USP48-201ENST00000308271 OR51B6Q9H340 312 aa17.26■□□□□ 0.35
USP48-201ENST00000308271 CDC14BO60729 498 aa17.25■□□□□ 0.35
USP48-201ENST00000308271 PARP11Q9NR21 331 aa17.25■□□□□ 0.35
USP48-201ENST00000308271 PIKFYVEQ9Y2I7 2098 aa17.25■□□□□ 0.35
USP48-201ENST00000308271 CENPVL1A0A0U1RR11 272 aa17.25■□□□□ 0.35
USP48-201ENST00000308271 ANKUB1A6NFN9 424 aa17.25■□□□□ 0.35
USP48-201ENST00000308271 MPTX1A8MV57 137 aa17.25■□□□□ 0.35
USP48-201ENST00000308271 TMEM196Q5HYL7 178 aa17.25■□□□□ 0.35
USP48-201ENST00000308271 PARM1Q6UWI2 310 aa17.25■□□□□ 0.35
USP48-201ENST00000308271 RFLNBQ8N5W9 214 aa17.25■□□□□ 0.35
USP48-201ENST00000308271 NECAP1Q8NC96 275 aa17.25■□□□□ 0.35
USP48-201ENST00000308271 NOXO1Q8NFA2 376 aa17.25■□□□□ 0.35
USP48-201ENST00000308271 VSTM2LQ96N03 204 aa17.25■□□□□ 0.35
USP48-201ENST00000308271 MYOTQ9UBF9 498 aa17.25■□□□□ 0.35
USP48-201ENST00000308271 CA14Q9ULX7 337 aa17.25■□□□□ 0.35
USP48-201ENST00000308271 ST3GAL6Q9Y274 331 aa17.25■□□□□ 0.35
USP48-201ENST00000308271 ZNF814B7Z6K7 855 aa17.25■□□□□ 0.35
USP48-201ENST00000308271 CST7O76096 145 aa17.25■□□□□ 0.35
USP48-201ENST00000308271 DRD3P35462 400 aa17.25■□□□□ 0.35
USP48-201ENST00000308271 PTGFRP43088 359 aa17.25■□□□□ 0.35
USP48-201ENST00000308271 OR2A2Q6IF42 318 aa17.25■□□□□ 0.35
USP48-201ENST00000308271 hCG_1809904A0A1W2PP81 198 aa17.25■□□□□ 0.35
USP48-201ENST00000308271 A0A1W2PR64 198 aa17.25■□□□□ 0.35
USP48-201ENST00000308271 A0A1W2PRV1 198 aa17.25■□□□□ 0.35
USP48-201ENST00000308271 PTX4Q96A99 478 aa17.25■□□□□ 0.35
USP48-201ENST00000308271 DUSP23Q9BVJ7 150 aa17.25■□□□□ 0.35
USP48-201ENST00000308271 VSTM5A8MXK1 200 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms