RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 LYG2Q86SG7 212 aa11.39□□□□□ -0.59
USP38-201ENST00000307017 AGBL5Q8NDL9 886 aa11.39□□□□□ -0.59
USP38-201ENST00000307017 NUBPLQ8TB37 319 aa11.39□□□□□ -0.59
USP38-201ENST00000307017 ZMIZ1Q9ULJ6 1067 aa11.39□□□□□ -0.59
USP38-201ENST00000307017 TMEM200CA6NKL6 621 aa11.39□□□□□ -0.59
USP38-201ENST00000307017 DUS4LO95620 317 aaKnown RBP11.39□□□□□ -0.59
USP38-201ENST00000307017 SMIM17P0DL12 118 aa11.39□□□□□ -0.59
USP38-201ENST00000307017 UQCRFS1P47985 274 aa11.39□□□□□ -0.59
USP38-201ENST00000307017 OXA1LQ15070 435 aa11.39□□□□□ -0.59
USP38-201ENST00000307017 RTL8BQ17RB0 113 aa11.39□□□□□ -0.59
USP38-201ENST00000307017 FBXL6Q8N531 539 aa11.39□□□□□ -0.59
USP38-201ENST00000307017 OR52N1Q8NH53 320 aa11.39□□□□□ -0.59
USP38-201ENST00000307017 SEH1LQ96EE3 360 aa11.39□□□□□ -0.59
USP38-201ENST00000307017 SRD5A3Q9H8P0 318 aa11.39□□□□□ -0.59
USP38-201ENST00000307017 FAM24AA6NFZ4 105 aa11.38□□□□□ -0.59
USP38-201ENST00000307017 C3orf80F5H4A9 247 aa11.38□□□□□ -0.59
USP38-201ENST00000307017 ORM2P19652 201 aa11.38□□□□□ -0.59
USP38-201ENST00000307017 S100A7P31151 101 aa11.38□□□□□ -0.59
USP38-201ENST00000307017 RPL24P83731 157 aaKnown RBP11.38□□□□□ -0.59
USP38-201ENST00000307017 ABI3BPQ7Z7G0 1075 aa11.38□□□□□ -0.59
USP38-201ENST00000307017 ARHGAP5-AS1Q96IT6 56 aa11.38□□□□□ -0.59
USP38-201ENST00000307017 SMOC1Q9H4F8 434 aa11.38□□□□□ -0.59
USP38-201ENST00000307017 COL14A1Q05707 1796 aaKnown RBP11.38□□□□□ -0.59
USP38-201ENST00000307017 SLC35E2P0CK97 266 aa11.38□□□□□ -0.59
USP38-201ENST00000307017 S100A4P26447 101 aaKnown RBP11.38□□□□□ -0.59
USP38-201ENST00000307017 PPP1CBP62140 327 aa11.38□□□□□ -0.59
USP38-201ENST00000307017 FA2HQ7L5A8 372 aa11.38□□□□□ -0.59
USP38-201ENST00000307017 GPR87Q9BY21 358 aa11.38□□□□□ -0.59
USP38-201ENST00000307017 FAM3AP98173 230 aa11.38□□□□□ -0.59
USP38-201ENST00000307017 ASAH1Q13510 395 aa11.38□□□□□ -0.59
USP38-201ENST00000307017 TMEM18Q96B42 140 aa11.38□□□□□ -0.59
USP38-201ENST00000307017 MMP25Q9NPA2 562 aa11.38□□□□□ -0.59
USP38-201ENST00000307017 FCGR3BO75015 233 aa11.38□□□□□ -0.59
USP38-201ENST00000307017 SLCO2B1O94956 709 aa11.38□□□□□ -0.59
USP38-201ENST00000307017 CTSLP07711 333 aa11.38□□□□□ -0.59
USP38-201ENST00000307017 SULT1A1P50225 295 aa11.38□□□□□ -0.59
USP38-201ENST00000307017 NKAIN3Q8N8D7 197 aa11.38□□□□□ -0.59
USP38-201ENST00000307017 FBXO34Q9NWN3 711 aa11.38□□□□□ -0.59
USP38-201ENST00000307017 MOGAT2Q3SYC2 334 aa11.38□□□□□ -0.59
USP38-201ENST00000307017 GGTA1PQ4G0N0 100 aa11.38□□□□□ -0.59
USP38-201ENST00000307017 RNFT1Q5M7Z0 435 aa11.38□□□□□ -0.59
USP38-201ENST00000307017 C17orf99Q6UX52 265 aa11.38□□□□□ -0.59
USP38-201ENST00000307017 LHFPL2Q6ZUX7 228 aa11.38□□□□□ -0.59
USP38-201ENST00000307017 PRSS41Q7RTY9 318 aa11.38□□□□□ -0.59
USP38-201ENST00000307017 OR1K1Q8NGR3 316 aa11.38□□□□□ -0.59
USP38-201ENST00000307017 OR1B1Q8NGR6 318 aa11.38□□□□□ -0.59
USP38-201ENST00000307017 SIGLEC11Q96RL6 698 aa11.38□□□□□ -0.59
USP38-201ENST00000307017 PCM1Q15154 2024 aa11.38□□□□□ -0.59
USP38-201ENST00000307017 DDX60Q8IY21 1712 aaKnown RBP11.37□□□□□ -0.59
USP38-201ENST00000307017 IFITM5A6NNB3 132 aa11.37□□□□□ -0.59
USP38-201ENST00000307017 MGMTP16455 207 aa11.37□□□□□ -0.59
USP38-201ENST00000307017 COX7A1P24310 79 aa11.37□□□□□ -0.59
USP38-201ENST00000307017 TRAV39A0A0B4J263 110 aa11.37□□□□□ -0.59
USP38-201ENST00000307017 A0A1B0GX78 115 aa11.37□□□□□ -0.59
USP38-201ENST00000307017 CDRT15L2A8MXV6 281 aa11.37□□□□□ -0.59
USP38-201ENST00000307017 JTBO76095 146 aa11.37□□□□□ -0.59
USP38-201ENST00000307017 ACTL6AO96019 429 aa11.37□□□□□ -0.59
USP38-201ENST00000307017 SLC35B1P78383 322 aa11.37□□□□□ -0.59
USP38-201ENST00000307017 PCK2Q16822 640 aa11.37□□□□□ -0.59
USP38-201ENST00000307017 WFDC3Q8IUB2 231 aa11.37□□□□□ -0.59
USP38-201ENST00000307017 RHOVQ96L33 236 aa11.37□□□□□ -0.59
USP38-201ENST00000307017 ATP5SQ99766 215 aa11.37□□□□□ -0.59
USP38-201ENST00000307017 LRP12Q9Y561 859 aa11.37□□□□□ -0.59
USP38-201ENST00000307017 TRGV8A0A0C4DH27 118 aa11.37□□□□□ -0.59
USP38-201ENST00000307017 ZAR1LA6NP61 321 aa11.37□□□□□ -0.59
USP38-201ENST00000307017 ABCD3P28288 659 aa11.37□□□□□ -0.59
USP38-201ENST00000307017 EVX1P49640 407 aa11.37□□□□□ -0.59
USP38-201ENST00000307017 OR5D13Q8NGL4 314 aa11.37□□□□□ -0.59
USP38-201ENST00000307017 NDRG4Q9ULP0 352 aaKnown RBP11.37□□□□□ -0.59
USP38-201ENST00000307017 GALR2O43603 387 aaPredicted RBP11.37□□□□□ -0.59
USP38-201ENST00000307017 FOXF1Q12946 379 aa11.37□□□□□ -0.59
USP38-201ENST00000307017 INPP5JQ15735 1006 aaPredicted RBP11.37□□□□□ -0.59
USP38-201ENST00000307017 TMEM38AQ9H6F2 299 aa11.37□□□□□ -0.59
USP38-201ENST00000307017 EDIL3O43854 480 aa11.37□□□□□ -0.59
USP38-201ENST00000307017 ZNF83P51522 516 aa11.37□□□□□ -0.59
USP38-201ENST00000307017 ZNF137PP52743 207 aa11.37□□□□□ -0.59
USP38-201ENST00000307017 CLRN3Q8NCR9 226 aa11.37□□□□□ -0.59
USP38-201ENST00000307017 OR2A1Q8NGT9 310 aa11.37□□□□□ -0.59
USP38-201ENST00000307017 PDLIM5Q96HC4 596 aaKnown RBP11.37□□□□□ -0.59
USP38-201ENST00000307017 GNRHR2Q96P88 292 aa11.37□□□□□ -0.59
USP38-201ENST00000307017 TMSB15BA0A087X1C1 80 aa11.37□□□□□ -0.59
USP38-201ENST00000307017 PRSS37A4D1T9 235 aa11.37□□□□□ -0.59
USP38-201ENST00000307017 UPK1AO00322 258 aa11.37□□□□□ -0.59
USP38-201ENST00000307017 OLFM2O95897 454 aa11.37□□□□□ -0.59
USP38-201ENST00000307017 ZDHHC23Q8IYP9 409 aa11.37□□□□□ -0.59
USP38-201ENST00000307017 NOL4LQ96MY1 436 aaPredicted RBP11.37□□□□□ -0.59
USP38-201ENST00000307017 LDLRAD4O15165 306 aa11.36□□□□□ -0.59
USP38-201ENST00000307017 MBTPS2O43462 519 aa11.36□□□□□ -0.59
USP38-201ENST00000307017 MVDP53602 400 aa11.36□□□□□ -0.59
USP38-201ENST00000307017 ERHP84090 104 aaKnown RBP11.36□□□□□ -0.59
USP38-201ENST00000307017 GUK1Q16774 197 aa11.36□□□□□ -0.59
USP38-201ENST00000307017 WDR74Q6RFH5 385 aaPredicted RBP11.36□□□□□ -0.59
USP38-201ENST00000307017 Q6ZN92 141 aa11.36□□□□□ -0.59
USP38-201ENST00000307017 ADGRG3Q86Y34 549 aa11.36□□□□□ -0.59
USP38-201ENST00000307017 ZDHHC5Q9C0B5 715 aa11.36□□□□□ -0.59
USP38-201ENST00000307017 PCED1AQ9H1Q7 454 aa11.36□□□□□ -0.59
USP38-201ENST00000307017 TIGITQ495A1 244 aa11.36□□□□□ -0.59
USP38-201ENST00000307017 KIRREL2Q6UWL6 708 aa11.36□□□□□ -0.59
USP38-201ENST00000307017 SFTPA1Q8IWL2 248 aa11.36□□□□□ -0.59
USP38-201ENST00000307017 LINC00469Q8N7U9 141 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms