RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 MED9Q9NWA0 146 aa14.27□□□□□ -0.13
USP42-201ENST00000306177 ALX3O95076 343 aa14.27□□□□□ -0.13
USP42-201ENST00000306177 OR10J4P0C629 311 aa14.27□□□□□ -0.13
USP42-201ENST00000306177 GZMKP49863 264 aa14.27□□□□□ -0.13
USP42-201ENST00000306177 HIST2H3AQ71DI3 136 aa14.27□□□□□ -0.13
USP42-201ENST00000306177 SMRP1Q8NCR6 262 aa14.27□□□□□ -0.13
USP42-201ENST00000306177 APH1BQ8WW43 257 aa14.27□□□□□ -0.13
USP42-201ENST00000306177 ST8SIA4Q92187 359 aa14.27□□□□□ -0.13
USP42-201ENST00000306177 ZNF629Q9UEG4 869 aaPredicted RBP14.27□□□□□ -0.13
USP42-201ENST00000306177 FBXO4Q9UKT5 387 aa14.27□□□□□ -0.13
USP42-201ENST00000306177 WNK3Q9BYP7 1800 aa14.26□□□□□ -0.13
USP42-201ENST00000306177 MEOX1P50221 254 aa14.26□□□□□ -0.13
USP42-201ENST00000306177 TMEM128Q5BJH2 165 aa14.26□□□□□ -0.13
USP42-201ENST00000306177 OR5M9Q8NGP3 310 aa14.26□□□□□ -0.13
USP42-201ENST00000306177 MCHR2Q969V1 340 aa14.26□□□□□ -0.13
USP42-201ENST00000306177 AQP7O14520 342 aa14.26□□□□□ -0.13
USP42-201ENST00000306177 CDKN2AP42771 156 aaKnown RBP14.26□□□□□ -0.13
USP42-201ENST00000306177 GNB1P62873 340 aa14.26□□□□□ -0.13
USP42-201ENST00000306177 SPEM2Q0P670 501 aa14.26□□□□□ -0.13
USP42-201ENST00000306177 PWWP2BQ6NUJ5 590 aa14.26□□□□□ -0.13
USP42-201ENST00000306177 EXTL1Q92935 676 aa14.26□□□□□ -0.13
USP42-201ENST00000306177 GALMQ96C23 342 aa14.26□□□□□ -0.13
USP42-201ENST00000306177 TXN2Q99757 166 aa14.26□□□□□ -0.13
USP42-201ENST00000306177 RER1O15258 196 aa14.26□□□□□ -0.13
USP42-201ENST00000306177 SSX1Q16384 188 aa14.26□□□□□ -0.13
USP42-201ENST00000306177 AARDQ4LEZ3 155 aa14.26□□□□□ -0.13
USP42-201ENST00000306177 MRM1Q6IN84 353 aaKnown RBP14.26□□□□□ -0.13
USP42-201ENST00000306177 CBLN3Q6UW01 205 aa14.26□□□□□ -0.13
USP42-201ENST00000306177 THSD4Q6ZMP0 1018 aa14.26□□□□□ -0.13
USP42-201ENST00000306177 FBXL14Q8N1E6 418 aa14.26□□□□□ -0.13
USP42-201ENST00000306177 GALNT16Q8N428 558 aa14.26□□□□□ -0.13
USP42-201ENST00000306177 OR52B4Q8NGK2 314 aa14.26□□□□□ -0.13
USP42-201ENST00000306177 OR2I1PQ8NGU4 316 aa14.26□□□□□ -0.13
USP42-201ENST00000306177 WDFY2Q96P53 400 aa14.26□□□□□ -0.13
USP42-201ENST00000306177 DHRS3O75911 302 aa14.26□□□□□ -0.13
USP42-201ENST00000306177 MAGEB1P43366 347 aa14.26□□□□□ -0.13
USP42-201ENST00000306177 BAP18Q8IXM2 172 aa14.26□□□□□ -0.13
USP42-201ENST00000306177 Q8IYB0 196 aa14.26□□□□□ -0.13
USP42-201ENST00000306177 PPP1R1CQ8WVI7 109 aa14.26□□□□□ -0.13
USP42-201ENST00000306177 COMMD5Q9GZQ3 224 aa14.26□□□□□ -0.13
USP42-201ENST00000306177 CHST6Q9GZX3 395 aa14.26□□□□□ -0.13
USP42-201ENST00000306177 GNG13Q9P2W3 67 aa14.26□□□□□ -0.13
USP42-201ENST00000306177 CACFD1Q9UGQ2 172 aa14.26□□□□□ -0.13
USP42-201ENST00000306177 PLPP3O14495 311 aa14.25□□□□□ -0.13
USP42-201ENST00000306177 ZNF354AO60765 605 aaPredicted RBP14.25□□□□□ -0.13
USP42-201ENST00000306177 SCGB1D1O95968 90 aa14.25□□□□□ -0.13
USP42-201ENST00000306177 IL5P05113 134 aa14.25□□□□□ -0.13
USP42-201ENST00000306177 GNG3P63215 75 aa14.25□□□□□ -0.13
USP42-201ENST00000306177 JMJD6Q6NYC1 403 aaPredicted RBP14.25□□□□□ -0.13
USP42-201ENST00000306177 GFRALQ6UXV0 394 aa14.25□□□□□ -0.13
USP42-201ENST00000306177 NUBPLQ8TB37 319 aa14.25□□□□□ -0.13
USP42-201ENST00000306177 FBXW5Q969U6 566 aa14.25□□□□□ -0.13
USP42-201ENST00000306177 BSCL2Q96G97 398 aaPredicted RBP14.25□□□□□ -0.13
USP42-201ENST00000306177 CDC42EP2O14613 210 aa14.25□□□□□ -0.13
USP42-201ENST00000306177 KLK10O43240 276 aa14.25□□□□□ -0.13
USP42-201ENST00000306177 GPANK1O95872 356 aa14.25□□□□□ -0.13
USP42-201ENST00000306177 DTYMKP23919 212 aa14.25□□□□□ -0.13
USP42-201ENST00000306177 ADPRHL1Q8NDY3 354 aa14.25□□□□□ -0.13
USP42-201ENST00000306177 OR4S1Q8NGB4 309 aa14.25□□□□□ -0.13
USP42-201ENST00000306177 ZNF75AQ96N20 296 aa14.25□□□□□ -0.13
USP42-201ENST00000306177 GNB4Q9HAV0 340 aa14.25□□□□□ -0.13
USP42-201ENST00000306177 IAPPP10997 89 aa14.25□□□□□ -0.13
USP42-201ENST00000306177 SRD5A2P31213 254 aa14.25□□□□□ -0.13
USP42-201ENST00000306177 ZNF485Q8NCK3 441 aa14.25□□□□□ -0.13
USP42-201ENST00000306177 PYCARD-AS1I3L0S3 204 aa14.25□□□□□ -0.13
USP42-201ENST00000306177 KISS1Q15726 138 aa14.25□□□□□ -0.13
USP42-201ENST00000306177 NLRC3Q7RTR2 1065 aa14.25□□□□□ -0.13
USP42-201ENST00000306177 PSENENQ9NZ42 101 aa14.25□□□□□ -0.13
USP42-201ENST00000306177 MTCH1Q9NZJ7 389 aa14.25□□□□□ -0.13
USP42-201ENST00000306177 CCL27Q9Y4X3 112 aa14.25□□□□□ -0.13
USP42-201ENST00000306177 PRSS23O95084 383 aa14.24□□□□□ -0.13
USP42-201ENST00000306177 TAS2R45P59539 299 aa14.24□□□□□ -0.13
USP42-201ENST00000306177 ERHP84090 104 aaKnown RBP14.24□□□□□ -0.13
USP42-201ENST00000306177 ARL16Q0P5N6 197 aa14.24□□□□□ -0.13
USP42-201ENST00000306177 GLDNQ6ZMI3 551 aaPredicted RBP14.24□□□□□ -0.13
USP42-201ENST00000306177 TCTE3Q8IZS6 198 aa14.24□□□□□ -0.13
USP42-201ENST00000306177 CDX2Q99626 313 aaPredicted RBP14.24□□□□□ -0.13
USP42-201ENST00000306177 NKX6-2Q9C056 277 aaPredicted RBP14.24□□□□□ -0.13
USP42-201ENST00000306177 FN3KRPQ9HA64 309 aa14.24□□□□□ -0.13
USP42-201ENST00000306177 OSGIN2Q9Y236 505 aa14.24□□□□□ -0.13
USP42-201ENST00000306177 TNS1Q9HBL0 1735 aaKnown RBP14.24□□□□□ -0.13
USP42-201ENST00000306177 SPNP16150 400 aa14.24□□□□□ -0.13
USP42-201ENST00000306177 TGM1P22735 817 aa14.24□□□□□ -0.13
USP42-201ENST00000306177 SCAND1P57086 179 aa14.24□□□□□ -0.13
USP42-201ENST00000306177 RPS16P62249 146 aaKnown RBP14.24□□□□□ -0.13
USP42-201ENST00000306177 UBE2G1P62253 170 aa14.24□□□□□ -0.13
USP42-201ENST00000306177 FOXC1Q12948 553 aa14.24□□□□□ -0.13
USP42-201ENST00000306177 BAGE3Q86Y29 109 aa14.24□□□□□ -0.13
USP42-201ENST00000306177 BAGE2Q86Y30 109 aa14.24□□□□□ -0.13
USP42-201ENST00000306177 ADAT1Q9BUB4 502 aaKnown RBP14.24□□□□□ -0.13
USP42-201ENST00000306177 C20orf24Q9BUV8 137 aa14.24□□□□□ -0.13
USP42-201ENST00000306177 ACTR3CQ9C0K3 210 aaPredicted RBP14.24□□□□□ -0.13
USP42-201ENST00000306177 NPIPB8E9PQR5 432 aa14.24□□□□□ -0.13
USP42-201ENST00000306177 GPR31O00270 319 aa14.24□□□□□ -0.13
USP42-201ENST00000306177 MBP02144 154 aa14.24□□□□□ -0.13
USP42-201ENST00000306177 HOXD11P31277 338 aaPredicted RBP14.24□□□□□ -0.13
USP42-201ENST00000306177 C16orf47Q6ZP98 133 aaPredicted RBP14.24□□□□□ -0.13
USP42-201ENST00000306177 OR8D4Q8NGM9 314 aa14.24□□□□□ -0.13
USP42-201ENST00000306177 OR10D3Q8NH80 312 aa14.24□□□□□ -0.13
USP42-201ENST00000306177 TINAGL1Q9GZM7 467 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms