RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 ZNF738Q8NE65 137 aa12.16□□□□□ -0.46
TRIM56-201ENST00000306085 ZNF502Q8TBZ5 544 aa12.16□□□□□ -0.46
TRIM56-201ENST00000306085 FAM53CQ9NYF3 392 aa12.16□□□□□ -0.46
TRIM56-201ENST00000306085 IHHQ14623 411 aa12.16□□□□□ -0.46
TRIM56-201ENST00000306085 TMEM81Q6P7N7 255 aa12.16□□□□□ -0.46
TRIM56-201ENST00000306085 HGDQ93099 445 aa12.16□□□□□ -0.46
TRIM56-201ENST00000306085 HINT3Q9NQE9 182 aaKnown RBP12.16□□□□□ -0.46
TRIM56-201ENST00000306085 GPR84Q9NQS5 396 aa12.16□□□□□ -0.46
TRIM56-201ENST00000306085 CACFD1Q9UGQ2 172 aa12.16□□□□□ -0.46
TRIM56-201ENST00000306085 CYB5R1Q9UHQ9 305 aa12.16□□□□□ -0.46
TRIM56-201ENST00000306085 FREM3P0C091 2139 aa12.16□□□□□ -0.46
TRIM56-201ENST00000306085 GPR87Q9BY21 358 aa12.16□□□□□ -0.46
TRIM56-201ENST00000306085 SMAD6O43541 496 aaKnown RBP12.16□□□□□ -0.46
TRIM56-201ENST00000306085 UQCC3Q6UW78 93 aa12.16□□□□□ -0.46
TRIM56-201ENST00000306085 WDR81Q562E7 1941 aa12.16□□□□□ -0.46
TRIM56-201ENST00000306085 HEATR5AQ86XA9 2040 aa12.16□□□□□ -0.46
TRIM56-201ENST00000306085 OR2A25A4D2G3 310 aa12.16□□□□□ -0.46
TRIM56-201ENST00000306085 GNG10P50151 68 aa12.16□□□□□ -0.46
TRIM56-201ENST00000306085 LYZP61626 148 aa12.16□□□□□ -0.46
TRIM56-201ENST00000306085 ZIC5Q96T25 663 aa12.16□□□□□ -0.46
TRIM56-201ENST00000306085 SPNS1Q9H2V7 528 aa12.16□□□□□ -0.46
TRIM56-201ENST00000306085 LOC389332A0A1B0GUA5 103 aa12.15□□□□□ -0.46
TRIM56-201ENST00000306085 TFAP2AP05549 437 aa12.15□□□□□ -0.46
TRIM56-201ENST00000306085 TNFRSF4P43489 277 aa12.15□□□□□ -0.46
TRIM56-201ENST00000306085 C19orf57Q0VDD7 668 aa12.15□□□□□ -0.46
TRIM56-201ENST00000306085 LRRC10Q5BKY1 277 aa12.15□□□□□ -0.46
TRIM56-201ENST00000306085 KMT2EQ8IZD2 1858 aa12.15□□□□□ -0.46
TRIM56-201ENST00000306085 ALDOCP09972 364 aaKnown RBP12.15□□□□□ -0.46
TRIM56-201ENST00000306085 KMT5CQ86Y97 462 aa12.15□□□□□ -0.46
TRIM56-201ENST00000306085 BADQ92934 168 aa12.15□□□□□ -0.46
TRIM56-201ENST00000306085 NDRG4Q9ULP0 352 aaKnown RBP12.15□□□□□ -0.46
TRIM56-201ENST00000306085 ZBTB25P24278 435 aa12.15□□□□□ -0.46
TRIM56-201ENST00000306085 CD68P34810 354 aaPredicted RBP12.15□□□□□ -0.46
TRIM56-201ENST00000306085 GPR150Q8NGU9 434 aa12.15□□□□□ -0.46
TRIM56-201ENST00000306085 PHYHIPQ92561 330 aa12.15□□□□□ -0.46
TRIM56-201ENST00000306085 FLYWCH2Q96CP2 140 aaKnown RBP12.15□□□□□ -0.46
TRIM56-201ENST00000306085 PACRGQ96M98 296 aaPredicted RBP12.15□□□□□ -0.46
TRIM56-201ENST00000306085 GPR137Q96N19 417 aa12.15□□□□□ -0.46
TRIM56-201ENST00000306085 TMPRSS11DO60235 418 aa12.15□□□□□ -0.46
TRIM56-201ENST00000306085 TEAD1P28347 426 aa12.15□□□□□ -0.46
TRIM56-201ENST00000306085 OR52N1Q8NH53 320 aa12.15□□□□□ -0.46
TRIM56-201ENST00000306085 NIPSNAP1Q9BPW8 284 aa12.15□□□□□ -0.46
TRIM56-201ENST00000306085 HCFC1R1Q9NWW0 138 aa12.15□□□□□ -0.46
TRIM56-201ENST00000306085 MT-ATP6P00846 226 aa12.15□□□□□ -0.46
TRIM56-201ENST00000306085 ST3GAL6Q9Y274 331 aa12.15□□□□□ -0.46
TRIM56-201ENST00000306085 KIR2DL1P43626 348 aaPredicted RBP12.15□□□□□ -0.46
TRIM56-201ENST00000306085 KIR2DL2P43627 348 aaPredicted RBP12.15□□□□□ -0.46
TRIM56-201ENST00000306085 GRAMD2BQ96HH9 432 aa12.15□□□□□ -0.46
TRIM56-201ENST00000306085 SPATA46Q5T0L3 261 aa12.15□□□□□ -0.46
TRIM56-201ENST00000306085 YRDCQ86U90 279 aaKnown RBP12.15□□□□□ -0.46
TRIM56-201ENST00000306085 OR2G2Q8NGZ5 317 aa12.15□□□□□ -0.46
TRIM56-201ENST00000306085 STARD4Q96DR4 205 aa12.15□□□□□ -0.46
TRIM56-201ENST00000306085 IER2Q9BTL4 223 aa12.15□□□□□ -0.46
TRIM56-201ENST00000306085 PRSS21Q9Y6M0 314 aa12.15□□□□□ -0.46
TRIM56-201ENST00000306085 CORTO00230 105 aa12.15□□□□□ -0.47
TRIM56-201ENST00000306085 FABP2P12104 132 aa12.15□□□□□ -0.47
TRIM56-201ENST00000306085 TCL1AP56279 114 aa12.15□□□□□ -0.47
TRIM56-201ENST00000306085 DNLZQ5SXM8 178 aa12.15□□□□□ -0.47
TRIM56-201ENST00000306085 TP53INP2Q8IXH6 220 aa12.15□□□□□ -0.47
TRIM56-201ENST00000306085 PIANPQ8IYJ0 282 aa12.15□□□□□ -0.47
TRIM56-201ENST00000306085 OR1L6Q8NGR2 347 aa12.15□□□□□ -0.47
TRIM56-201ENST00000306085 TMEM238LA0A1B0GVL6 79 aa12.14□□□□□ -0.47
TRIM56-201ENST00000306085 A6NJY4 79 aa12.14□□□□□ -0.47
TRIM56-201ENST00000306085 AOAHP28039 575 aa12.14□□□□□ -0.47
TRIM56-201ENST00000306085 EXT1Q16394 746 aa12.14□□□□□ -0.47
TRIM56-201ENST00000306085 OR10V1Q8NGI7 309 aa12.14□□□□□ -0.47
TRIM56-201ENST00000306085 EDARADDQ8WWZ3 215 aa12.14□□□□□ -0.47
TRIM56-201ENST00000306085 ANKRD36CQ5JPF3 1778 aa12.14□□□□□ -0.47
TRIM56-201ENST00000306085 TRAV39A0A0B4J263 110 aa12.14□□□□□ -0.47
TRIM56-201ENST00000306085 PRLHRP49683 370 aa12.14□□□□□ -0.47
TRIM56-201ENST00000306085 CTSCP53634 463 aa12.14□□□□□ -0.47
TRIM56-201ENST00000306085 LSMEM1Q8N8F7 131 aa12.14□□□□□ -0.47
TRIM56-201ENST00000306085 MDGA1Q8NFP4 955 aa12.14□□□□□ -0.47
TRIM56-201ENST00000306085 OR1L1Q8NH94 360 aa12.14□□□□□ -0.47
TRIM56-201ENST00000306085 WBP2Q969T9 261 aa12.14□□□□□ -0.47
TRIM56-201ENST00000306085 CSF3RQ99062 836 aa12.14□□□□□ -0.47
TRIM56-201ENST00000306085 M0R135 149 aa12.14□□□□□ -0.47
TRIM56-201ENST00000306085 CA2P00918 260 aa12.14□□□□□ -0.47
TRIM56-201ENST00000306085 CEBPBP17676 345 aa12.14□□□□□ -0.47
TRIM56-201ENST00000306085 LIPAP38571 399 aa12.14□□□□□ -0.47
TRIM56-201ENST00000306085 WNT3P56703 355 aa12.14□□□□□ -0.47
TRIM56-201ENST00000306085 FNDC7Q5VTL7 733 aa12.14□□□□□ -0.47
TRIM56-201ENST00000306085 RLN3Q8WXF3 142 aa12.14□□□□□ -0.47
TRIM56-201ENST00000306085 ZNF799Q96GE5 643 aa12.14□□□□□ -0.47
TRIM56-201ENST00000306085 PLPPR2Q96GM1 343 aa12.14□□□□□ -0.47
TRIM56-201ENST00000306085 DOCK6Q96HP0 2047 aa12.14□□□□□ -0.47
TRIM56-201ENST00000306085 TNFSF11O14788 317 aa12.14□□□□□ -0.47
TRIM56-201ENST00000306085 MAMSTRQ6ZN01 415 aa12.14□□□□□ -0.47
TRIM56-201ENST00000306085 FAM24BQ8N5W8 94 aa12.14□□□□□ -0.47
TRIM56-201ENST00000306085 SLC35B3Q9H1N7 401 aa12.14□□□□□ -0.47
TRIM56-201ENST00000306085 A4GALTQ9NPC4 353 aa12.14□□□□□ -0.47
TRIM56-201ENST00000306085 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.14□□□□□ -0.47
TRIM56-201ENST00000306085 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.14□□□□□ -0.47
TRIM56-201ENST00000306085 ALOX12BO75342 701 aa12.14□□□□□ -0.47
TRIM56-201ENST00000306085 PLAURQ03405 335 aa12.14□□□□□ -0.47
TRIM56-201ENST00000306085 TTC9BQ8N6N2 239 aa12.14□□□□□ -0.47
TRIM56-201ENST00000306085 ORM2P19652 201 aa12.14□□□□□ -0.47
TRIM56-201ENST00000306085 DPPA3Q6W0C5 159 aa12.14□□□□□ -0.47
TRIM56-201ENST00000306085 A0A1B0GUH1 482 aa12.14□□□□□ -0.47
TRIM56-201ENST00000306085 GLTPD2A6NH11 291 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms