RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 LBHQ53QV2 105 aaPredicted RBP9.72□□□□□ -0.85
LSM3-201ENST00000306024 SLC25A24Q6NUK1 477 aa9.72□□□□□ -0.85
LSM3-201ENST00000306024 MED25Q71SY5 747 aa9.72□□□□□ -0.85
LSM3-201ENST00000306024 FGF11Q92914 225 aa9.72□□□□□ -0.85
LSM3-201ENST00000306024 BSCL2Q96G97 398 aaPredicted RBP9.72□□□□□ -0.85
LSM3-201ENST00000306024 SCGB3A2Q96PL1 93 aa9.72□□□□□ -0.85
LSM3-201ENST00000306024 ZNF587Q96SQ5 575 aaPredicted RBP9.72□□□□□ -0.85
LSM3-201ENST00000306024 STACQ99469 402 aa9.72□□□□□ -0.85
LSM3-201ENST00000306024 SLCO5A1Q9H2Y9 848 aa9.72□□□□□ -0.85
LSM3-201ENST00000306024 RNF122Q9H9V4 155 aa9.72□□□□□ -0.85
LSM3-201ENST00000306024 SIRT7Q9NRC8 400 aa9.72□□□□□ -0.85
LSM3-201ENST00000306024 ZDHHC8Q9ULC8 765 aa9.72□□□□□ -0.85
LSM3-201ENST00000306024 U3KQA8 63 aa9.72□□□□□ -0.85
LSM3-201ENST00000306024 KNG1P01042 644 aa9.72□□□□□ -0.85
LSM3-201ENST00000306024 EDN3P14138 238 aa9.72□□□□□ -0.85
LSM3-201ENST00000306024 SERPINA2P20848 420 aa9.72□□□□□ -0.85
LSM3-201ENST00000306024 RPS27P42677 84 aaKnown RBP9.72□□□□□ -0.85
LSM3-201ENST00000306024 NAAAQ02083 359 aa9.72□□□□□ -0.85
LSM3-201ENST00000306024 SPOCK1Q08629 439 aa9.72□□□□□ -0.85
LSM3-201ENST00000306024 PLA2G2CQ5R387 149 aa9.72□□□□□ -0.85
LSM3-201ENST00000306024 ARRDC1Q8N5I2 433 aa9.72□□□□□ -0.85
LSM3-201ENST00000306024 SLC38A9Q8NBW4 561 aa9.72□□□□□ -0.85
LSM3-201ENST00000306024 DTD1Q8TEA8 209 aa9.72□□□□□ -0.85
LSM3-201ENST00000306024 RASD2Q96D21 266 aa9.72□□□□□ -0.85
LSM3-201ENST00000306024 THOC3Q96J01 351 aaKnown RBP9.72□□□□□ -0.85
LSM3-201ENST00000306024 PACRGQ96M98 296 aaPredicted RBP9.72□□□□□ -0.85
LSM3-201ENST00000306024 NXF5Q9H1B4 397 aaKnown RBP9.72□□□□□ -0.85
LSM3-201ENST00000306024 CACNA1GO43497 2377 aa9.72□□□□□ -0.85
LSM3-201ENST00000306024 MED19A0JLT2 244 aaPredicted RBP9.71□□□□□ -0.85
LSM3-201ENST00000306024 DLL1O00548 723 aa9.71□□□□□ -0.85
LSM3-201ENST00000306024 EPPINO95925 133 aa9.71□□□□□ -0.85
LSM3-201ENST00000306024 ITGB2P05107 769 aa9.71□□□□□ -0.85
LSM3-201ENST00000306024 FGF5P12034 268 aa9.71□□□□□ -0.85
LSM3-201ENST00000306024 HTR2CP28335 458 aa9.71□□□□□ -0.85
LSM3-201ENST00000306024 DIO1P49895 249 aa9.71□□□□□ -0.85
LSM3-201ENST00000306024 DCAF7P61962 342 aa9.71□□□□□ -0.85
LSM3-201ENST00000306024 MDGA2Q7Z553 956 aa9.71□□□□□ -0.85
LSM3-201ENST00000306024 SUMF1Q8NBK3 374 aa9.71□□□□□ -0.85
LSM3-201ENST00000306024 HSD17B11Q8NBQ5 300 aa9.71□□□□□ -0.85
LSM3-201ENST00000306024 OR4N2Q8NGD1 307 aa9.71□□□□□ -0.85
LSM3-201ENST00000306024 MARCH1Q8TCQ1 289 aa9.71□□□□□ -0.85
LSM3-201ENST00000306024 THRSPQ92748 146 aa9.71□□□□□ -0.85
LSM3-201ENST00000306024 KISS1RQ969F8 398 aaPredicted RBP9.71□□□□□ -0.85
LSM3-201ENST00000306024 NUDT9Q9BW91 350 aa9.71□□□□□ -0.85
LSM3-201ENST00000306024 OR11A1Q9GZK7 315 aa9.71□□□□□ -0.85
LSM3-201ENST00000306024 ABI3Q9P2A4 366 aa9.71□□□□□ -0.85
LSM3-201ENST00000306024 TMED7Q9Y3B3 224 aa9.71□□□□□ -0.85
LSM3-201ENST00000306024 B4E171 279 aa9.71□□□□□ -0.86
LSM3-201ENST00000306024 CD14P08571 375 aa9.71□□□□□ -0.86
LSM3-201ENST00000306024 TSPAN7P41732 249 aa9.71□□□□□ -0.86
LSM3-201ENST00000306024 CX3CR1P49238 355 aa9.71□□□□□ -0.86
LSM3-201ENST00000306024 FOXO1Q12778 655 aa9.71□□□□□ -0.86
LSM3-201ENST00000306024 ZNF705AQ6ZN79 300 aaPredicted RBP9.71□□□□□ -0.86
LSM3-201ENST00000306024 DGAT2L6Q6ZPD8 337 aa9.71□□□□□ -0.86
LSM3-201ENST00000306024 ZNF550Q7Z398 422 aa9.71□□□□□ -0.86
LSM3-201ENST00000306024 CLEC1AQ8NC01 280 aa9.71□□□□□ -0.86
LSM3-201ENST00000306024 NPRL2Q8WTW4 380 aa9.71□□□□□ -0.86
LSM3-201ENST00000306024 NTN3O00634 580 aaPredicted RBP9.71□□□□□ -0.86
LSM3-201ENST00000306024 CD79AP11912 226 aa9.71□□□□□ -0.86
LSM3-201ENST00000306024 TACR3P29371 465 aa9.71□□□□□ -0.86
LSM3-201ENST00000306024 NPY4RP50391 375 aa9.71□□□□□ -0.86
LSM3-201ENST00000306024 RPS18P62269 152 aaKnown RBP9.71□□□□□ -0.86
LSM3-201ENST00000306024 INSM1Q01101 510 aaPredicted RBP9.71□□□□□ -0.86
LSM3-201ENST00000306024 NHLH2Q02577 135 aa9.71□□□□□ -0.86
LSM3-201ENST00000306024 SLC22A25Q6T423 547 aa9.71□□□□□ -0.86
LSM3-201ENST00000306024 DRAM2Q6UX65 266 aa9.71□□□□□ -0.86
LSM3-201ENST00000306024 MRPL41Q8IXM3 137 aaKnown RBP9.71□□□□□ -0.86
LSM3-201ENST00000306024 TMEM104Q8NE00 496 aa9.71□□□□□ -0.86
LSM3-201ENST00000306024 RSPO3Q9BXY4 272 aaPredicted RBP9.71□□□□□ -0.86
LSM3-201ENST00000306024 UBQLN4Q9NRR5 601 aa9.71□□□□□ -0.86
LSM3-201ENST00000306024 TRAV8-7A0A075B6U6 113 aa9.7□□□□□ -0.86
LSM3-201ENST00000306024 XKRYO14609 159 aa9.7□□□□□ -0.86
LSM3-201ENST00000306024 TP53I11O14683 189 aa9.7□□□□□ -0.86
LSM3-201ENST00000306024 ADAP1O75689 374 aa9.7□□□□□ -0.86
LSM3-201ENST00000306024 RENP00797 406 aa9.7□□□□□ -0.86
LSM3-201ENST00000306024 FCGR2CP31995 323 aa9.7□□□□□ -0.86
LSM3-201ENST00000306024 RELQ04864 619 aaPredicted RBP9.7□□□□□ -0.86
LSM3-201ENST00000306024 ARHGAP11BQ3KRB8 267 aa9.7□□□□□ -0.86
LSM3-201ENST00000306024 PRAMEF8Q5VWM4 474 aa9.7□□□□□ -0.86
LSM3-201ENST00000306024 PRAMEF7Q5VXH5 474 aa9.7□□□□□ -0.86
LSM3-201ENST00000306024 RPUSD3Q6P087 351 aaKnown RBP9.7□□□□□ -0.86
LSM3-201ENST00000306024 TMPPEQ6ZT21 453 aa9.7□□□□□ -0.86
LSM3-201ENST00000306024 P4HA3Q7Z4N8 544 aa9.7□□□□□ -0.86
LSM3-201ENST00000306024 HPSE2Q8WWQ2 592 aa9.7□□□□□ -0.86
LSM3-201ENST00000306024 TSSK2Q96PF2 358 aa9.7□□□□□ -0.86
LSM3-201ENST00000306024 AKIRIN1Q9H9L7 192 aaPredicted RBP9.7□□□□□ -0.86
LSM3-201ENST00000306024 PARD6AQ9NPB6 346 aa9.7□□□□□ -0.86
LSM3-201ENST00000306024 CACFD1Q9UGQ2 172 aa9.7□□□□□ -0.86
LSM3-201ENST00000306024 IL17BQ9UHF5 180 aa9.7□□□□□ -0.86
LSM3-201ENST00000306024 JTBO76095 146 aa9.7□□□□□ -0.86
LSM3-201ENST00000306024 PPICP45877 212 aa9.7□□□□□ -0.86
LSM3-201ENST00000306024 DPY19L4Q7Z388 723 aa9.7□□□□□ -0.86
LSM3-201ENST00000306024 PLPP5Q8NEB5 264 aa9.7□□□□□ -0.86
LSM3-201ENST00000306024 PRSS33Q8NF86 280 aa9.7□□□□□ -0.86
LSM3-201ENST00000306024 SLC25A44Q96H78 314 aaPredicted RBP9.7□□□□□ -0.86
LSM3-201ENST00000306024 PTGES2Q9H7Z7 377 aa9.7□□□□□ -0.86
LSM3-201ENST00000306024 LANCL2Q9NS86 450 aa9.7□□□□□ -0.86
LSM3-201ENST00000306024 POMT1Q9Y6A1 747 aa9.7□□□□□ -0.86
LSM3-201ENST00000306024 PIEZO1Q92508 2521 aa9.7□□□□□ -0.86
LSM3-201ENST00000306024 ZNF705FA8MVS1 300 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms