RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 UNC119Q13432 240 aa12.6□□□□□ -0.39
SHCBP1-201ENST00000303383 PLCXD3Q63HM9 321 aa12.6□□□□□ -0.39
SHCBP1-201ENST00000303383 ZNF782Q6ZMW2 699 aaPredicted RBP12.6□□□□□ -0.39
SHCBP1-201ENST00000303383 C9orf106Q8NAJ2 232 aa12.6□□□□□ -0.39
SHCBP1-201ENST00000303383 SELENOIQ9C0D9 397 aa12.6□□□□□ -0.39
SHCBP1-201ENST00000303383 OR51B6Q9H340 312 aa12.6□□□□□ -0.39
SHCBP1-201ENST00000303383 GHRLQ9UBU3 117 aa12.6□□□□□ -0.39
SHCBP1-201ENST00000303383 RBMX2Q9Y388 322 aaKnown RBP12.6□□□□□ -0.39
SHCBP1-201ENST00000303383 CACNA1GO43497 2377 aa12.6□□□□□ -0.39
SHCBP1-201ENST00000303383 GMDSO60547 372 aa12.6□□□□□ -0.39
SHCBP1-201ENST00000303383 CYB5AP00167 134 aa12.6□□□□□ -0.39
SHCBP1-201ENST00000303383 CSTBP04080 98 aaKnown RBP12.6□□□□□ -0.39
SHCBP1-201ENST00000303383 H2AFB2P0C5Z0 115 aa12.6□□□□□ -0.39
SHCBP1-201ENST00000303383 MRPL49Q13405 166 aaKnown RBP12.6□□□□□ -0.39
SHCBP1-201ENST00000303383 MOGAT2Q3SYC2 334 aa12.6□□□□□ -0.39
SHCBP1-201ENST00000303383 ACSF3Q4G176 576 aaPredicted RBP12.6□□□□□ -0.39
SHCBP1-201ENST00000303383 TFAP2EQ6VUC0 442 aa12.6□□□□□ -0.39
SHCBP1-201ENST00000303383 RNF144BQ7Z419 303 aa12.6□□□□□ -0.39
SHCBP1-201ENST00000303383 RBMXL3Q8N7X1 1067 aaKnown RBP12.6□□□□□ -0.39
SHCBP1-201ENST00000303383 NAXEQ8NCW5 288 aa12.6□□□□□ -0.39
SHCBP1-201ENST00000303383 OR51T1Q8NGJ9 327 aa12.6□□□□□ -0.39
SHCBP1-201ENST00000303383 BCL2L2Q92843 193 aaPredicted RBP12.6□□□□□ -0.39
SHCBP1-201ENST00000303383 ABHD17AQ96GS6 310 aa12.6□□□□□ -0.39
SHCBP1-201ENST00000303383 SCPEP1Q9HB40 452 aa12.6□□□□□ -0.39
SHCBP1-201ENST00000303383 CEP295Q9C0D2 2601 aa12.6□□□□□ -0.39
SHCBP1-201ENST00000303383 ZNF816-ZNF321PA0A0X1KG74 233 aa12.6□□□□□ -0.39
SHCBP1-201ENST00000303383 SULT1C2O00338 296 aa12.6□□□□□ -0.39
SHCBP1-201ENST00000303383 CHRM2P08172 466 aa12.6□□□□□ -0.39
SHCBP1-201ENST00000303383 RBP2P50120 134 aa12.6□□□□□ -0.39
SHCBP1-201ENST00000303383 FAM3AP98173 230 aa12.6□□□□□ -0.39
SHCBP1-201ENST00000303383 CDNFQ49AH0 187 aa12.6□□□□□ -0.39
SHCBP1-201ENST00000303383 BIVMQ86UB2 503 aa12.6□□□□□ -0.39
SHCBP1-201ENST00000303383 ZNF221Q9UK13 617 aa12.6□□□□□ -0.39
SHCBP1-201ENST00000303383 ALX3O95076 343 aa12.59□□□□□ -0.39
SHCBP1-201ENST00000303383 FAM157BP0CG42 384 aa12.59□□□□□ -0.39
SHCBP1-201ENST00000303383 EDN3P14138 238 aa12.59□□□□□ -0.39
SHCBP1-201ENST00000303383 KRTAP27-1Q3LI81 207 aa12.59□□□□□ -0.39
SHCBP1-201ENST00000303383 PLEKHN1Q494U1 663 aaPredicted RBP12.59□□□□□ -0.39
SHCBP1-201ENST00000303383 FAAP20Q6NZ36 180 aa12.59□□□□□ -0.39
SHCBP1-201ENST00000303383 MDP1Q86V88 176 aa12.59□□□□□ -0.39
SHCBP1-201ENST00000303383 ZNF584Q8IVC4 421 aa12.59□□□□□ -0.39
SHCBP1-201ENST00000303383 FTMTQ8N4E7 242 aa12.59□□□□□ -0.39
SHCBP1-201ENST00000303383 PAQR4Q8N4S7 273 aaPredicted RBP12.59□□□□□ -0.39
SHCBP1-201ENST00000303383 OR10K1Q8NGX5 313 aa12.59□□□□□ -0.39
SHCBP1-201ENST00000303383 CMBLQ96DG6 245 aa12.59□□□□□ -0.39
SHCBP1-201ENST00000303383 PAPOLGQ9BWT3 736 aaKnown RBP12.59□□□□□ -0.39
SHCBP1-201ENST00000303383 ACTR6Q9GZN1 396 aa12.59□□□□□ -0.39
SHCBP1-201ENST00000303383 IFT46Q9NQC8 304 aa12.59□□□□□ -0.39
SHCBP1-201ENST00000303383 PLSCR2Q9NRY7 297 aa12.59□□□□□ -0.39
SHCBP1-201ENST00000303383 MSRB2Q9Y3D2 182 aa12.59□□□□□ -0.39
SHCBP1-201ENST00000303383 hCG_38984A0A1B0GV85 526 aa12.59□□□□□ -0.39
SHCBP1-201ENST00000303383 ZNF503-AS2A6NEH8 195 aa12.59□□□□□ -0.39
SHCBP1-201ENST00000303383 HMX3A6NHT5 357 aa12.59□□□□□ -0.39
SHCBP1-201ENST00000303383 TMEM14DPA8MWL7 114 aa12.59□□□□□ -0.39
SHCBP1-201ENST00000303383 K7EM74 188 aa12.59□□□□□ -0.39
SHCBP1-201ENST00000303383 CDC14BO60729 498 aa12.59□□□□□ -0.39
SHCBP1-201ENST00000303383 SERPINA5P05154 406 aa12.59□□□□□ -0.39
SHCBP1-201ENST00000303383 AKAIN1P0CW23 69 aa12.59□□□□□ -0.39
SHCBP1-201ENST00000303383 BTCP35070 178 aa12.59□□□□□ -0.39
SHCBP1-201ENST00000303383 BTG1P62324 171 aa12.59□□□□□ -0.39
SHCBP1-201ENST00000303383 RSU1Q15404 277 aa12.59□□□□□ -0.39
SHCBP1-201ENST00000303383 OR56B1Q8NGI3 324 aa12.59□□□□□ -0.39
SHCBP1-201ENST00000303383 OR10R2Q8NGX6 335 aa12.59□□□□□ -0.39
SHCBP1-201ENST00000303383 OR6K3Q8NGY3 331 aa12.59□□□□□ -0.39
SHCBP1-201ENST00000303383 MS4A3Q96HJ5 214 aa12.59□□□□□ -0.39
SHCBP1-201ENST00000303383 NOX3Q9HBY0 568 aa12.59□□□□□ -0.39
SHCBP1-201ENST00000303383 B3GNT2Q9NY97 397 aa12.59□□□□□ -0.39
SHCBP1-201ENST00000303383 PTTG3PQ9NZH4 202 aa12.59□□□□□ -0.39
SHCBP1-201ENST00000303383 A0A1W2PR80 420 aa12.58□□□□□ -0.39
SHCBP1-201ENST00000303383 FIGNL2A6NMB9 653 aa12.58□□□□□ -0.39
SHCBP1-201ENST00000303383 PSMB1P20618 241 aaKnown RBP12.58□□□□□ -0.39
SHCBP1-201ENST00000303383 ATP1B3P54709 279 aa12.58□□□□□ -0.39
SHCBP1-201ENST00000303383 GNG2P59768 71 aa12.58□□□□□ -0.39
SHCBP1-201ENST00000303383 TBC1D28Q2M2D7 210 aa12.58□□□□□ -0.39
SHCBP1-201ENST00000303383 LHFPL2Q6ZUX7 228 aa12.58□□□□□ -0.39
SHCBP1-201ENST00000303383 TMEM104Q8NE00 496 aa12.58□□□□□ -0.39
SHCBP1-201ENST00000303383 SLC30A7Q8NEW0 376 aa12.58□□□□□ -0.39
SHCBP1-201ENST00000303383 OR5L1Q8NGL2 311 aa12.58□□□□□ -0.39
SHCBP1-201ENST00000303383 CDH20Q9HBT6 801 aa12.58□□□□□ -0.39
SHCBP1-201ENST00000303383 PROCRQ9UNN8 238 aa12.58□□□□□ -0.39
SHCBP1-201ENST00000303383 LHX6Q9UPM6 363 aa12.58□□□□□ -0.39
SHCBP1-201ENST00000303383 SSBP1Q04837 148 aaKnown RBP12.58□□□□□ -0.4
SHCBP1-201ENST00000303383 VWA1Q6PCB0 445 aa12.58□□□□□ -0.4
SHCBP1-201ENST00000303383 Q6ZT83 130 aa12.58□□□□□ -0.4
SHCBP1-201ENST00000303383 BTN2A1Q7KYR7 527 aa12.58□□□□□ -0.4
SHCBP1-201ENST00000303383 STEAP2Q8NFT2 490 aa12.58□□□□□ -0.4
SHCBP1-201ENST00000303383 RAB3CQ96E17 227 aa12.58□□□□□ -0.4
SHCBP1-201ENST00000303383 EIF3KQ9UBQ5 218 aaKnown RBP12.58□□□□□ -0.4
SHCBP1-201ENST00000303383 TP53TG5Q9Y2B4 290 aa12.58□□□□□ -0.4
SHCBP1-201ENST00000303383 LOC400499M0QZD8 3231 aa12.58□□□□□ -0.4
SHCBP1-201ENST00000303383 A8MV72 311 aaPredicted RBP12.58□□□□□ -0.4
SHCBP1-201ENST00000303383 RAB27BO00194 218 aa12.58□□□□□ -0.4
SHCBP1-201ENST00000303383 GNB3P16520 340 aa12.58□□□□□ -0.4
SHCBP1-201ENST00000303383 IGHV1-2P23083 117 aa12.58□□□□□ -0.4
SHCBP1-201ENST00000303383 IDH3GP51553 393 aaPredicted RBP12.58□□□□□ -0.4
SHCBP1-201ENST00000303383 TAS2R19P59542 299 aa12.58□□□□□ -0.4
SHCBP1-201ENST00000303383 Q6ZSR3 168 aa12.58□□□□□ -0.4
SHCBP1-201ENST00000303383 CCDC36Q8IYA8 594 aa12.58□□□□□ -0.4
SHCBP1-201ENST00000303383 OR56B2PQ8NGI1 322 aa12.58□□□□□ -0.4
SHCBP1-201ENST00000303383 OR56B4Q8NH76 319 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms