RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 PARP12Q9H0J9 701 aaKnown RBP6.9□□□□□ -1.31
SF3B3-201ENST00000302516 TMEM231Q9H6L2 316 aa6.9□□□□□ -1.31
SF3B3-201ENST00000302516 ATF1P18846 271 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 EDDM3AQ14507 147 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 CORO6Q6QEF8 472 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 WDR81Q562E7 1941 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 CBY3A6NI87 242 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 ADAM11O75078 769 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 OR5I1Q13606 314 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 NKAIN1Q4KMZ8 207 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 SOWAHCQ53LP3 525 aaPredicted RBP6.89□□□□□ -1.31
SF3B3-201ENST00000302516 FA2HQ7L5A8 372 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 OR2A1Q8NGT9 310 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 ZNF596Q8TC21 504 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 XIRP1Q702N8 1843 aaKnown RBP6.89□□□□□ -1.31
SF3B3-201ENST00000302516 TMEM30CPA0ZSE6 113 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 TMEM202A6NGA9 273 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 FGF2P09038 288 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 NDUFB7P17568 137 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 ZNF345Q14585 488 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 C9orf135Q5VTT2 229 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 ABLIM2Q6H8Q1 611 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 ZNF275Q9NSD4 429 aaPredicted RBP6.89□□□□□ -1.31
SF3B3-201ENST00000302516 SLCO1C1Q9NYB5 712 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 SLC45A2Q9UMX9 530 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 TIMM9Q9Y5J7 89 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 LY75O60449 1722 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 GBF1Q92538 1859 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 TMEM272A0A1B0GTI8 110 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 DUXBA0A1W2PPF3 345 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 DEDDO75618 318 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 CLN3Q13286 438 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 ZADH2Q8N4Q0 377 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 DUSP18Q8NEJ0 188 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 SMIM14Q96QK8 99 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 RNF2Q99496 336 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 ZC3H12DA2A288 527 aaKnown RBP6.89□□□□□ -1.31
SF3B3-201ENST00000302516 CLDN34H7C241 214 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 TOX3O15405 576 aaPredicted RBP6.89□□□□□ -1.31
SF3B3-201ENST00000302516 OR2J2O76002 312 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 KLKB1P03952 638 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 RAB7AP51149 207 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 DHRS2Q13268 280 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 SLC25A35Q3KQZ1 300 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 GGNBP1Q5YKI7 109 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 PRRX2Q99811 253 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 RBM38Q9H0Z9 239 aaKnown RBP6.89□□□□□ -1.31
SF3B3-201ENST00000302516 TAF1LQ8IZX4 1826 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 AP4M1O00189 453 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 GPANK1O95872 356 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 TMEFF1Q8IYR6 380 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 C16orf52Q8NHV5 167 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 H1FXQ92522 213 aaKnown RBP6.89□□□□□ -1.31
SF3B3-201ENST00000302516 C10orf35Q96D05 121 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 PIK3IP1Q96FE7 263 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 TMEFF2Q9UIK5 374 aaPredicted RBP6.89□□□□□ -1.31
SF3B3-201ENST00000302516 ORM1P02763 201 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 ZNF17P17021 662 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 PCMT1P22061 227 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 SLC6A1P30531 599 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 HES1Q14469 280 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 ZNF385BQ569K4 471 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 FLVCR2Q9UPI3 526 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 KLF13Q9Y2Y9 288 aaPredicted RBP6.89□□□□□ -1.31
SF3B3-201ENST00000302516 LSM2Q9Y333 95 aaKnown RBP6.89□□□□□ -1.31
SF3B3-201ENST00000302516 UPK1AO00322 258 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 FGF17O60258 216 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 PTBP3O95758 552 aaKnown RBP6.89□□□□□ -1.31
SF3B3-201ENST00000302516 GRPP07492 148 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 TMEM241Q24JQ0 296 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 SLC25A30Q5SVS4 291 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 CLDN23Q96B33 292 aa6.89□□□□□ -1.31
SF3B3-201ENST00000302516 F5P12259 2224 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 FUT3P21217 361 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 ELOBQ15370 118 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 NKAIN2Q5VXU1 208 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 C6orf15Q6UXA7 325 aaPredicted RBP6.88□□□□□ -1.31
SF3B3-201ENST00000302516 DLK2Q6UY11 383 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 RELL2Q8NC24 303 aaPredicted RBP6.88□□□□□ -1.31
SF3B3-201ENST00000302516 OR5M1Q8NGP8 315 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 AKR7LQ8NHP1 331 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 SMDT1Q9H4I9 107 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 A0A087WUJ7 227 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 C5orf49A4QMS7 147 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 TMPRSS11DO60235 418 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 IGFBP1P08833 259 aaPredicted RBP6.88□□□□□ -1.31
SF3B3-201ENST00000302516 TMPRSS11FQ6ZWK6 438 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 TRILQ7L0X0 811 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 OR8D4Q8NGM9 314 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.88□□□□□ -1.31
SF3B3-201ENST00000302516 BCL2L2Q92843 193 aaPredicted RBP6.88□□□□□ -1.31
SF3B3-201ENST00000302516 IKZF5Q9H5V7 419 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 LPAR3Q9UBY5 353 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 WSB1Q9Y6I7 421 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 ZNF646O15015 1829 aaPredicted RBP6.88□□□□□ -1.31
SF3B3-201ENST00000302516 INHBBP09529 407 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 GLRA1P23415 457 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 MPGP29372 298 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 TM4SF4P48230 202 aa6.88□□□□□ -1.31
SF3B3-201ENST00000302516 MLF2Q15773 248 aaPredicted RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms