RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 TSEN15Q8WW01 171 aaKnown RBP18.03■□□□□ 0.48
SMCO4-201ENST00000298966 S100ZQ8WXG8 99 aa18.03■□□□□ 0.48
SMCO4-201ENST00000298966 AP3S1Q92572 193 aa18.03■□□□□ 0.48
SMCO4-201ENST00000298966 MSI2Q96DH6 328 aaKnown RBP18.03■□□□□ 0.48
SMCO4-201ENST00000298966 PGAM5Q96HS1 289 aa18.03■□□□□ 0.48
SMCO4-201ENST00000298966 OR14A2Q96R54 314 aa18.03■□□□□ 0.48
SMCO4-201ENST00000298966 PEX16Q9Y5Y5 336 aa18.03■□□□□ 0.48
SMCO4-201ENST00000298966 TRBV5-7A0A0A0MS05 114 aa18.02■□□□□ 0.48
SMCO4-201ENST00000298966 LOC107986453A0A1B0GWG9 222 aa18.02■□□□□ 0.48
SMCO4-201ENST00000298966 SHISA3A0PJX4 238 aa18.02■□□□□ 0.48
SMCO4-201ENST00000298966 ANKRD61A6NGH8 418 aa18.02■□□□□ 0.48
SMCO4-201ENST00000298966 TCF21O43680 179 aa18.02■□□□□ 0.48
SMCO4-201ENST00000298966 HLA-HP01893 362 aa18.02■□□□□ 0.48
SMCO4-201ENST00000298966 ACSM4P0C7M7 580 aa18.02■□□□□ 0.48
SMCO4-201ENST00000298966 CLEC2LP0C7M8 214 aa18.02■□□□□ 0.48
SMCO4-201ENST00000298966 CD40P25942 277 aa18.02■□□□□ 0.48
SMCO4-201ENST00000298966 PDLIM4P50479 330 aa18.02■□□□□ 0.48
SMCO4-201ENST00000298966 ZNF83P51522 516 aa18.02■□□□□ 0.48
SMCO4-201ENST00000298966 SPOCK1Q08629 439 aa18.02■□□□□ 0.48
SMCO4-201ENST00000298966 HNRNPA0Q13151 305 aaKnown RBP18.02■□□□□ 0.48
SMCO4-201ENST00000298966 DOK3Q7L591 496 aa18.02■□□□□ 0.48
SMCO4-201ENST00000298966 OR8B12Q8NGG6 310 aa18.02■□□□□ 0.48
SMCO4-201ENST00000298966 OR1J2Q8NGS2 313 aa18.02■□□□□ 0.48
SMCO4-201ENST00000298966 FGFBP3Q8TAT2 258 aa18.02■□□□□ 0.48
SMCO4-201ENST00000298966 C10orf35Q96D05 121 aa18.02■□□□□ 0.48
SMCO4-201ENST00000298966 PIMREGQ9BSJ6 248 aa18.02■□□□□ 0.48
SMCO4-201ENST00000298966 PPIL3Q9H2H8 161 aaKnown RBP18.02■□□□□ 0.48
SMCO4-201ENST00000298966 DHRS7CA6NNS2 312 aa18.01■□□□□ 0.47
SMCO4-201ENST00000298966 SYT7O43581 403 aa18.01■□□□□ 0.47
SMCO4-201ENST00000298966 MTRF1O75570 445 aaKnown RBP18.01■□□□□ 0.47
SMCO4-201ENST00000298966 RAD51DO75771 328 aa18.01■□□□□ 0.47
SMCO4-201ENST00000298966 IGLV3-1P01715 115 aa18.01■□□□□ 0.47
SMCO4-201ENST00000298966 SERPINA5P05154 406 aa18.01■□□□□ 0.47
SMCO4-201ENST00000298966 FSTP19883 344 aa18.01■□□□□ 0.47
SMCO4-201ENST00000298966 DYNC1I2Q13409 638 aaKnown RBP18.01■□□□□ 0.47
SMCO4-201ENST00000298966 RSPO1Q2MKA7 263 aaPredicted RBP18.01■□□□□ 0.47
SMCO4-201ENST00000298966 FAM27D1Q5T7N8 215 aa18.01■□□□□ 0.47
SMCO4-201ENST00000298966 Q6ZSR3 168 aa18.01■□□□□ 0.47
SMCO4-201ENST00000298966 FAM57BQ71RH2 274 aa18.01■□□□□ 0.47
SMCO4-201ENST00000298966 TMEM106AQ96A25 262 aa18.01■□□□□ 0.47
SMCO4-201ENST00000298966 KCNS3Q9BQ31 491 aa18.01■□□□□ 0.47
SMCO4-201ENST00000298966 TPK1Q9H3S4 243 aa18.01■□□□□ 0.47
SMCO4-201ENST00000298966 SMURF1Q9HCE7 757 aa18.01■□□□□ 0.47
SMCO4-201ENST00000298966 CKLFQ9UBR5 152 aa18.01■□□□□ 0.47
SMCO4-201ENST00000298966 FOXJ3Q9UPW0 622 aa18.01■□□□□ 0.47
SMCO4-201ENST00000298966 DYSFO75923 2080 aa18.01■□□□□ 0.47
SMCO4-201ENST00000298966 ARFGEF3Q5TH69 2177 aa18.01■□□□□ 0.47
SMCO4-201ENST00000298966 SVEP1Q4LDE5 3571 aa18.01■□□□□ 0.47
SMCO4-201ENST00000298966 LOC390937A0A1W2PQ73 354 aa18■□□□□ 0.47
SMCO4-201ENST00000298966 VWC2LB2RUY7 222 aa18■□□□□ 0.47
SMCO4-201ENST00000298966 NDUFS8O00217 210 aa18■□□□□ 0.47
SMCO4-201ENST00000298966 XRCC2O43543 280 aa18■□□□□ 0.47
SMCO4-201ENST00000298966 LY6HO94772 140 aa18■□□□□ 0.47
SMCO4-201ENST00000298966 PATE4P0C8F1 98 aa18■□□□□ 0.47
SMCO4-201ENST00000298966 STOMP27105 288 aa18■□□□□ 0.47
SMCO4-201ENST00000298966 APLNRP35414 380 aa18■□□□□ 0.47
SMCO4-201ENST00000298966 NR4A2P43354 598 aa18■□□□□ 0.47
SMCO4-201ENST00000298966 RANBP1P43487 201 aa18■□□□□ 0.47
SMCO4-201ENST00000298966 HIKESHIQ53FT3 197 aa18■□□□□ 0.47
SMCO4-201ENST00000298966 PLPP7Q8NBV4 271 aa18■□□□□ 0.47
SMCO4-201ENST00000298966 KCTD12Q96CX2 325 aaKnown RBP18■□□□□ 0.47
SMCO4-201ENST00000298966 C6orf62Q9GZU0 229 aaPredicted RBP18■□□□□ 0.47
SMCO4-201ENST00000298966 OPA3Q9H6K4 179 aa18■□□□□ 0.47
SMCO4-201ENST00000298966 TCF7L1Q9HCS4 588 aa18■□□□□ 0.47
SMCO4-201ENST00000298966 HMG20AQ9NP66 347 aa18■□□□□ 0.47
SMCO4-201ENST00000298966 NOX4Q9NPH5 578 aa18■□□□□ 0.47
SMCO4-201ENST00000298966 BRD7Q9NPI1 651 aa18■□□□□ 0.47
SMCO4-201ENST00000298966 AKIP1Q9NQ31 210 aa18■□□□□ 0.47
SMCO4-201ENST00000298966 ATP23Q9Y6H3 246 aa18■□□□□ 0.47
SMCO4-201ENST00000298966 CLDN25C9JDP6 229 aa17.99■□□□□ 0.47
SMCO4-201ENST00000298966 M0R1B8 84 aa17.99■□□□□ 0.47
SMCO4-201ENST00000298966 PIN1P1O15428 100 aa17.99■□□□□ 0.47
SMCO4-201ENST00000298966 TGFAP01135 160 aa17.99■□□□□ 0.47
SMCO4-201ENST00000298966 CBR1P16152 277 aa17.99■□□□□ 0.47
SMCO4-201ENST00000298966 SRMP19623 302 aa17.99■□□□□ 0.47
SMCO4-201ENST00000298966 RAB3BP20337 219 aa17.99■□□□□ 0.47
SMCO4-201ENST00000298966 S100A5P33763 92 aa17.99■□□□□ 0.47
SMCO4-201ENST00000298966 BMXP51813 675 aa17.99■□□□□ 0.47
SMCO4-201ENST00000298966 C3orf36Q3SXR2 165 aa17.99■□□□□ 0.47
SMCO4-201ENST00000298966 COLCA1Q6ZS62 124 aa17.99■□□□□ 0.47
SMCO4-201ENST00000298966 OR13C3Q8NGS6 347 aa17.99■□□□□ 0.47
SMCO4-201ENST00000298966 ACOT12Q8WYK0 555 aa17.99■□□□□ 0.47
SMCO4-201ENST00000298966 MRI1Q9BV20 369 aa17.99■□□□□ 0.47
SMCO4-201ENST00000298966 C1QTNF5Q9BXJ0 243 aa17.99■□□□□ 0.47
SMCO4-201ENST00000298966 WDR12Q9GZL7 423 aaKnown RBP17.99■□□□□ 0.47
SMCO4-201ENST00000298966 SLC25A15Q9Y619 301 aa17.99■□□□□ 0.47
SMCO4-201ENST00000298966 TENM1Q9UKZ4 2725 aa17.98■□□□□ 0.47
SMCO4-201ENST00000298966 MEGF11A6BM72 1044 aa17.98■□□□□ 0.47
SMCO4-201ENST00000298966 P2RY10O00398 339 aa17.98■□□□□ 0.47
SMCO4-201ENST00000298966 LCATP04180 440 aa17.98■□□□□ 0.47
SMCO4-201ENST00000298966 CFPP27918 469 aa17.98■□□□□ 0.47
SMCO4-201ENST00000298966 ZNF846Q147U1 533 aa17.98■□□□□ 0.47
SMCO4-201ENST00000298966 TBC1D28Q2M2D7 210 aa17.98■□□□□ 0.47
SMCO4-201ENST00000298966 CR1LQ2VPA4 569 aa17.98■□□□□ 0.47
SMCO4-201ENST00000298966 UNQ6126/PRO20091Q6UXV3 157 aa17.98■□□□□ 0.47
SMCO4-201ENST00000298966 MDP1Q86V88 176 aa17.98■□□□□ 0.47
SMCO4-201ENST00000298966 RDH10Q8IZV5 341 aa17.98■□□□□ 0.47
SMCO4-201ENST00000298966 PARP16Q8N5Y8 322 aa17.98■□□□□ 0.47
SMCO4-201ENST00000298966 CPEB3Q8NE35 698 aaKnown RBP17.98■□□□□ 0.47
SMCO4-201ENST00000298966 APOBEC3DQ96AK3 386 aaPredicted RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms