RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 C1QTNF5Q9BXJ0 243 aa13.52□□□□□ -0.25
LSM6-201ENST00000296581 SHARPINQ9H0F6 387 aa13.52□□□□□ -0.25
LSM6-201ENST00000296581 RGCCQ9H4X1 137 aa13.52□□□□□ -0.25
LSM6-201ENST00000296581 METTL17Q9H7H0 456 aaPredicted RBP13.52□□□□□ -0.25
LSM6-201ENST00000296581 MCUBQ9NWR8 336 aa13.52□□□□□ -0.25
LSM6-201ENST00000296581 DCAF16Q9NXF7 216 aa13.52□□□□□ -0.25
LSM6-201ENST00000296581 MBD3L4A6NDZ8 208 aaPredicted RBP13.51□□□□□ -0.25
LSM6-201ENST00000296581 MBD3L3A6NE82 208 aaPredicted RBP13.51□□□□□ -0.25
LSM6-201ENST00000296581 MBD3L5A6NJ08 208 aaPredicted RBP13.51□□□□□ -0.25
LSM6-201ENST00000296581 HOXA1P49639 335 aaPredicted RBP13.51□□□□□ -0.25
LSM6-201ENST00000296581 MMP15P51511 669 aa13.51□□□□□ -0.25
LSM6-201ENST00000296581 PLA2G7Q13093 441 aa13.51□□□□□ -0.25
LSM6-201ENST00000296581 FAM180AQ6UWF9 173 aa13.51□□□□□ -0.25
LSM6-201ENST00000296581 MBD3L2Q8NHZ7 208 aaPredicted RBP13.51□□□□□ -0.25
LSM6-201ENST00000296581 ENKURQ8TC29 256 aa13.51□□□□□ -0.25
LSM6-201ENST00000296581 PCNPQ8WW12 178 aaKnown RBP13.51□□□□□ -0.25
LSM6-201ENST00000296581 NKX3-1Q99801 234 aaPredicted RBP13.51□□□□□ -0.25
LSM6-201ENST00000296581 LOC100509620A0A075B734 347 aa13.51□□□□□ -0.25
LSM6-201ENST00000296581 F8W036 122 aa13.51□□□□□ -0.25
LSM6-201ENST00000296581 LDLRAD4O15165 306 aa13.51□□□□□ -0.25
LSM6-201ENST00000296581 PLA2G10O15496 165 aa13.51□□□□□ -0.25
LSM6-201ENST00000296581 GMDSO60547 372 aa13.51□□□□□ -0.25
LSM6-201ENST00000296581 ALDOBP05062 364 aa13.51□□□□□ -0.25
LSM6-201ENST00000296581 TPOP07202 933 aa13.51□□□□□ -0.25
LSM6-201ENST00000296581 CAPZA1P52907 286 aa13.51□□□□□ -0.25
LSM6-201ENST00000296581 RAB1AP62820 205 aa13.51□□□□□ -0.25
LSM6-201ENST00000296581 FLI1Q01543 452 aaPredicted RBP13.51□□□□□ -0.25
LSM6-201ENST00000296581 SSC4DQ8WTU2 575 aa13.51□□□□□ -0.25
LSM6-201ENST00000296581 PP6455Q8WZ26 134 aa13.51□□□□□ -0.25
LSM6-201ENST00000296581 REEP6Q96HR9 211 aa13.51□□□□□ -0.25
LSM6-201ENST00000296581 LINC00052Q96N35 136 aa13.51□□□□□ -0.25
LSM6-201ENST00000296581 THAP7Q9BT49 309 aaPredicted RBP13.51□□□□□ -0.25
LSM6-201ENST00000296581 HEXA-AS1Q9H8Q6 139 aa13.51□□□□□ -0.25
LSM6-201ENST00000296581 RAXQ9Y2V3 346 aa13.51□□□□□ -0.25
LSM6-201ENST00000296581 PTPRQQ9UMZ3 2332 aa13.5□□□□□ -0.25
LSM6-201ENST00000296581 TMEM272A0A1B0GTI8 110 aa13.5□□□□□ -0.25
LSM6-201ENST00000296581 GSTZ1O43708 216 aaPredicted RBP13.5□□□□□ -0.25
LSM6-201ENST00000296581 CD79AP11912 226 aa13.5□□□□□ -0.25
LSM6-201ENST00000296581 GABRA1P14867 456 aa13.5□□□□□ -0.25
LSM6-201ENST00000296581 IGHV1-2P23083 117 aa13.5□□□□□ -0.25
LSM6-201ENST00000296581 PTGER4P35408 488 aa13.5□□□□□ -0.25
LSM6-201ENST00000296581 RRAS2P62070 204 aaPredicted RBP13.5□□□□□ -0.25
LSM6-201ENST00000296581 HIKESHIQ53FT3 197 aa13.5□□□□□ -0.25
LSM6-201ENST00000296581 Q6ZT83 130 aa13.5□□□□□ -0.25
LSM6-201ENST00000296581 SEM1Q6ZVN7 128 aa13.5□□□□□ -0.25
LSM6-201ENST00000296581 IZUMO1Q8IYV9 350 aa13.5□□□□□ -0.25
LSM6-201ENST00000296581 C19orf18Q8NEA5 215 aa13.5□□□□□ -0.25
LSM6-201ENST00000296581 OR4D6Q8NGJ1 314 aa13.5□□□□□ -0.25
LSM6-201ENST00000296581 NANOS1Q8WY41 292 aaKnown RBP13.5□□□□□ -0.25
LSM6-201ENST00000296581 RFT1Q96AA3 541 aa13.5□□□□□ -0.25
LSM6-201ENST00000296581 CHST5Q9GZS9 411 aa13.5□□□□□ -0.25
LSM6-201ENST00000296581 CNTD2Q9H8S5 307 aa13.5□□□□□ -0.25
LSM6-201ENST00000296581 IGKV1-9A0A0C4DH69 117 aa13.5□□□□□ -0.25
LSM6-201ENST00000296581 NUPL2O15504 423 aaKnown RBP13.5□□□□□ -0.25
LSM6-201ENST00000296581 WDR1O75083 606 aa13.5□□□□□ -0.25
LSM6-201ENST00000296581 ARSBP15848 533 aa13.5□□□□□ -0.25
LSM6-201ENST00000296581 RPL35P42766 123 aaKnown RBP13.5□□□□□ -0.25
LSM6-201ENST00000296581 PTH2RP49190 550 aa13.5□□□□□ -0.25
LSM6-201ENST00000296581 EFNB2P52799 333 aa13.5□□□□□ -0.25
LSM6-201ENST00000296581 HACD4Q5VWC8 232 aa13.5□□□□□ -0.25
LSM6-201ENST00000296581 RTL6Q6ICC9 239 aa13.5□□□□□ -0.25
LSM6-201ENST00000296581 PLET1Q6UQ28 207 aa13.5□□□□□ -0.25
LSM6-201ENST00000296581 CNEP1R1Q8N9A8 125 aa13.5□□□□□ -0.25
LSM6-201ENST00000296581 Q8NA96 180 aa13.5□□□□□ -0.25
LSM6-201ENST00000296581 OR2AE1Q8NHA4 323 aa13.5□□□□□ -0.25
LSM6-201ENST00000296581 SPSB4Q96A44 273 aa13.5□□□□□ -0.25
LSM6-201ENST00000296581 PTX4Q96A99 478 aa13.5□□□□□ -0.25
LSM6-201ENST00000296581 KCNK15Q9H427 330 aa13.5□□□□□ -0.25
LSM6-201ENST00000296581 PIGLQ9Y2B2 252 aa13.5□□□□□ -0.25
LSM6-201ENST00000296581 MGAQ8IWI9 3026 aa13.5□□□□□ -0.25
LSM6-201ENST00000296581 XRCC2O43543 280 aa13.49□□□□□ -0.25
LSM6-201ENST00000296581 TMIGD3P0DMS9 266 aaPredicted RBP13.49□□□□□ -0.25
LSM6-201ENST00000296581 EDN3P14138 238 aa13.49□□□□□ -0.25
LSM6-201ENST00000296581 PRF1P14222 555 aa13.49□□□□□ -0.25
LSM6-201ENST00000296581 FAHP16930 419 aa13.49□□□□□ -0.25
LSM6-201ENST00000296581 CDK2P24941 298 aa13.49□□□□□ -0.25
LSM6-201ENST00000296581 STOMP27105 288 aa13.49□□□□□ -0.25
LSM6-201ENST00000296581 TGFBR3Q03167 851 aa13.49□□□□□ -0.25
LSM6-201ENST00000296581 FOXF2Q12947 444 aa13.49□□□□□ -0.25
LSM6-201ENST00000296581 VWA1Q6PCB0 445 aa13.49□□□□□ -0.25
LSM6-201ENST00000296581 ZNF584Q8IVC4 421 aa13.49□□□□□ -0.25
LSM6-201ENST00000296581 SEMA6DQ8NFY4 1073 aa13.49□□□□□ -0.25
LSM6-201ENST00000296581 YIPF5Q969M3 257 aa13.49□□□□□ -0.25
LSM6-201ENST00000296581 BOD1Q96IK1 185 aa13.49□□□□□ -0.25
LSM6-201ENST00000296581 POM121L2Q96KW2 1035 aa13.49□□□□□ -0.25
LSM6-201ENST00000296581 ZFP3Q96NJ6 502 aa13.49□□□□□ -0.25
LSM6-201ENST00000296581 PLSCR4Q9NRQ2 329 aa13.49□□□□□ -0.25
LSM6-201ENST00000296581 SVILO95425 2214 aa13.49□□□□□ -0.25
LSM6-201ENST00000296581 EEF1E1O43324 174 aaKnown RBP13.48□□□□□ -0.25
LSM6-201ENST00000296581 LANCL1O43813 399 aa13.48□□□□□ -0.25
LSM6-201ENST00000296581 CTAG2O75638 210 aa13.48□□□□□ -0.25
LSM6-201ENST00000296581 TNFSF13O75888 250 aa13.48□□□□□ -0.25
LSM6-201ENST00000296581 COX5AP20674 150 aa13.48□□□□□ -0.25
LSM6-201ENST00000296581 ZNF93P35789 620 aaPredicted RBP13.48□□□□□ -0.25
LSM6-201ENST00000296581 PLP2Q04941 152 aa13.48□□□□□ -0.25
LSM6-201ENST00000296581 EXOSC2Q13868 293 aaKnown RBP13.48□□□□□ -0.25
LSM6-201ENST00000296581 GSG1Q2KHT4 349 aa13.48□□□□□ -0.25
LSM6-201ENST00000296581 TMEM69Q5SWH9 247 aa13.48□□□□□ -0.25
LSM6-201ENST00000296581 BIVMQ86UB2 503 aa13.48□□□□□ -0.25
LSM6-201ENST00000296581 C15orf40Q8WUR7 153 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms