RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 C9orf152Q5JTZ5 239 aa12.04□□□□□ -0.48
HPS3-201ENST00000296051 WDR88Q6ZMY6 472 aa12.04□□□□□ -0.48
HPS3-201ENST00000296051 HSD17B13Q7Z5P4 300 aaPredicted RBP12.04□□□□□ -0.48
HPS3-201ENST00000296051 STPG2Q8N412 459 aa12.04□□□□□ -0.48
HPS3-201ENST00000296051 FAM24BQ8N5W8 94 aa12.04□□□□□ -0.48
HPS3-201ENST00000296051 NUDT9Q9BW91 350 aa12.04□□□□□ -0.48
HPS3-201ENST00000296051 LOC105371267A0A1B0GV96 52 aa12.03□□□□□ -0.48
HPS3-201ENST00000296051 RNASEK-C17orf49H0YIS7 233 aa12.03□□□□□ -0.48
HPS3-201ENST00000296051 IFNA10P01566 189 aa12.03□□□□□ -0.48
HPS3-201ENST00000296051 IFNA4P05014 189 aa12.03□□□□□ -0.48
HPS3-201ENST00000296051 GUSBP08236 651 aa12.03□□□□□ -0.48
HPS3-201ENST00000296051 TESK1Q15569 626 aa12.03□□□□□ -0.48
HPS3-201ENST00000296051 SSX2Q16385 188 aa12.03□□□□□ -0.48
HPS3-201ENST00000296051 TMEM123Q8N131 208 aa12.03□□□□□ -0.48
HPS3-201ENST00000296051 GJC3Q8NFK1 279 aa12.03□□□□□ -0.48
HPS3-201ENST00000296051 HPSE2Q8WWQ2 592 aa12.03□□□□□ -0.48
HPS3-201ENST00000296051 FAM60AQ9NP50 221 aa12.03□□□□□ -0.48
HPS3-201ENST00000296051 B3GALT5Q9Y2C3 310 aa12.03□□□□□ -0.48
HPS3-201ENST00000296051 A0A087WUJ7 227 aa12.03□□□□□ -0.48
HPS3-201ENST00000296051 AQP8O94778 261 aa12.03□□□□□ -0.48
HPS3-201ENST00000296051 SFTA3P0C7M3 94 aa12.03□□□□□ -0.48
HPS3-201ENST00000296051 ARL3P36405 182 aa12.03□□□□□ -0.48
HPS3-201ENST00000296051 FMODQ06828 376 aa12.03□□□□□ -0.48
HPS3-201ENST00000296051 ELFN2Q5R3F8 820 aa12.03□□□□□ -0.48
HPS3-201ENST00000296051 ANKRD16Q6P6B7 361 aa12.03□□□□□ -0.48
HPS3-201ENST00000296051 ZPLD1Q8TCW7 415 aa12.03□□□□□ -0.48
HPS3-201ENST00000296051 ZNF2Q9BSG1 426 aaPredicted RBP12.03□□□□□ -0.48
HPS3-201ENST00000296051 TP53TG5Q9Y2B4 290 aa12.03□□□□□ -0.48
HPS3-201ENST00000296051 KPTNQ9Y664 436 aa12.03□□□□□ -0.48
HPS3-201ENST00000296051 CEP350Q5VT06 3117 aa12.03□□□□□ -0.48
HPS3-201ENST00000296051 MUC6Q6W4X9 2439 aa12.03□□□□□ -0.48
HPS3-201ENST00000296051 MPZL1O95297 269 aa12.03□□□□□ -0.48
HPS3-201ENST00000296051 FABP1P07148 127 aa12.03□□□□□ -0.48
HPS3-201ENST00000296051 QDPRP09417 244 aa12.03□□□□□ -0.48
HPS3-201ENST00000296051 ZNF728P0DKX0 622 aa12.03□□□□□ -0.48
HPS3-201ENST00000296051 RAB4BP61018 213 aa12.03□□□□□ -0.48
HPS3-201ENST00000296051 SLC25A30Q5SVS4 291 aa12.03□□□□□ -0.48
HPS3-201ENST00000296051 C1QL3Q5VWW1 255 aa12.03□□□□□ -0.48
HPS3-201ENST00000296051 DUSP15Q9H1R2 295 aaPredicted RBP12.03□□□□□ -0.48
HPS3-201ENST00000296051 CUL9Q8IWT3 2517 aa12.03□□□□□ -0.48
HPS3-201ENST00000296051 TMEM272A0A1B0GTI8 110 aa12.02□□□□□ -0.48
HPS3-201ENST00000296051 TBX19O60806 448 aa12.02□□□□□ -0.48
HPS3-201ENST00000296051 AGFG2O95081 481 aa12.02□□□□□ -0.48
HPS3-201ENST00000296051 NANOS3P60323 173 aaKnown RBP12.02□□□□□ -0.48
HPS3-201ENST00000296051 TAF9Q16594 264 aa12.02□□□□□ -0.48
HPS3-201ENST00000296051 NPSR1Q6W5P4 371 aa12.02□□□□□ -0.48
HPS3-201ENST00000296051 MRPL41Q8IXM3 137 aaKnown RBP12.02□□□□□ -0.48
HPS3-201ENST00000296051 NKAIN3Q8N8D7 197 aa12.02□□□□□ -0.48
HPS3-201ENST00000296051 OR51A2Q8NGJ7 313 aa12.02□□□□□ -0.48
HPS3-201ENST00000296051 OR2G3Q8NGZ4 309 aa12.02□□□□□ -0.48
HPS3-201ENST00000296051 NIPSNAP3BQ9BS92 247 aa12.02□□□□□ -0.48
HPS3-201ENST00000296051 SUCNR1Q9BXA5 334 aa12.02□□□□□ -0.48
HPS3-201ENST00000296051 MRM2Q9UI43 246 aaKnown RBP12.02□□□□□ -0.48
HPS3-201ENST00000296051 TP53BP1Q12888 1972 aaPredicted RBP12.02□□□□□ -0.48
HPS3-201ENST00000296051 A0A1W2PQF6 199 aa12.02□□□□□ -0.48
HPS3-201ENST00000296051 PRSS37A4D1T9 235 aa12.02□□□□□ -0.48
HPS3-201ENST00000296051 ZNF724A8MTY0 619 aa12.02□□□□□ -0.48
HPS3-201ENST00000296051 VSIG10L2P0DP72 767 aa12.02□□□□□ -0.48
HPS3-201ENST00000296051 PNLIPRP2P54317 469 aa12.02□□□□□ -0.48
HPS3-201ENST00000296051 HSF1Q00613 529 aa12.02□□□□□ -0.48
HPS3-201ENST00000296051 SLAMF6Q96DU3 332 aa12.02□□□□□ -0.48
HPS3-201ENST00000296051 C4orf45Q96LM5 186 aa12.02□□□□□ -0.48
HPS3-201ENST00000296051 SPIN2AQ99865 258 aa12.02□□□□□ -0.48
HPS3-201ENST00000296051 SPIN2BQ9BPZ2 258 aa12.02□□□□□ -0.48
HPS3-201ENST00000296051 MAGT1Q9H0U3 335 aa12.02□□□□□ -0.48
HPS3-201ENST00000296051 FRRS1LQ9P0K9 344 aa12.02□□□□□ -0.48
HPS3-201ENST00000296051 DIDO1Q9BTC0 2240 aaKnown RBP12.02□□□□□ -0.49
HPS3-201ENST00000296051 hCG_1809904A0A1W2PP81 198 aa12.02□□□□□ -0.49
HPS3-201ENST00000296051 A0A1W2PPE2 198 aa12.02□□□□□ -0.49
HPS3-201ENST00000296051 A0A1W2PR64 198 aa12.02□□□□□ -0.49
HPS3-201ENST00000296051 A0A1W2PRV1 198 aa12.02□□□□□ -0.49
HPS3-201ENST00000296051 TMEM218A2RU14 115 aa12.02□□□□□ -0.49
HPS3-201ENST00000296051 HLA-DQB1P01920 261 aa12.02□□□□□ -0.49
HPS3-201ENST00000296051 ARG1P05089 322 aa12.02□□□□□ -0.49
HPS3-201ENST00000296051 CD37P11049 281 aa12.02□□□□□ -0.49
HPS3-201ENST00000296051 MEOX2P50222 304 aa12.02□□□□□ -0.49
HPS3-201ENST00000296051 RAB11AP62491 216 aa12.02□□□□□ -0.49
HPS3-201ENST00000296051 MFGE8Q08431 387 aaPredicted RBP12.02□□□□□ -0.49
HPS3-201ENST00000296051 PMS2CLQ68D20 193 aa12.02□□□□□ -0.49
HPS3-201ENST00000296051 GPR84Q9NQS5 396 aa12.02□□□□□ -0.49
HPS3-201ENST00000296051 HMSDA8MTL9 139 aa12.02□□□□□ -0.49
HPS3-201ENST00000296051 TNFSF11O14788 317 aa12.02□□□□□ -0.49
HPS3-201ENST00000296051 NFYBP25208 207 aa12.02□□□□□ -0.49
HPS3-201ENST00000296051 RPL23AP62750 156 aaKnown RBP12.02□□□□□ -0.49
HPS3-201ENST00000296051 GUCA2BQ16661 112 aa12.02□□□□□ -0.49
HPS3-201ENST00000296051 QSER1Q2KHR3 1735 aa12.01□□□□□ -0.49
HPS3-201ENST00000296051 SHISA8B8ZZ34 492 aa12.01□□□□□ -0.49
HPS3-201ENST00000296051 MSTNO14793 375 aa12.01□□□□□ -0.49
HPS3-201ENST00000296051 FUT5Q11128 374 aa12.01□□□□□ -0.49
HPS3-201ENST00000296051 SSPNQ14714 243 aa12.01□□□□□ -0.49
HPS3-201ENST00000296051 C22orf15Q8WYQ4 148 aa12.01□□□□□ -0.49
HPS3-201ENST00000296051 KISS1RQ969F8 398 aaPredicted RBP12.01□□□□□ -0.49
HPS3-201ENST00000296051 LURAP1Q96LR2 239 aa12.01□□□□□ -0.49
HPS3-201ENST00000296051 SLC5A6Q9Y289 635 aa12.01□□□□□ -0.49
HPS3-201ENST00000296051 LILRB5O75023 590 aa12.01□□□□□ -0.49
HPS3-201ENST00000296051 MT-ATP6P00846 226 aa12.01□□□□□ -0.49
HPS3-201ENST00000296051 IFNA1P01562 189 aa12.01□□□□□ -0.49
HPS3-201ENST00000296051 CTRB1P17538 263 aa12.01□□□□□ -0.49
HPS3-201ENST00000296051 RPS23P62266 143 aaKnown RBP12.01□□□□□ -0.49
HPS3-201ENST00000296051 RAB32Q13637 225 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms