RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 WDR92Q96MX6 357 aa10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 SHARPINQ9H0F6 387 aa10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 UFC1Q9Y3C8 167 aa10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 TAF1P21675 1872 aa10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 RRP8O43159 456 aaKnown RBP10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 NRASP01111 189 aa10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 HRASP01112 189 aa10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 KRASP01116 189 aa10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 MYBPHQ13203 477 aa10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 SERTAD2Q14140 314 aa10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 OR5M9Q8NGP3 310 aa10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 ASB16Q96NS5 453 aa10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 DOK1Q99704 481 aa10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 USP2O75604 605 aaPredicted RBP10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 SUB1P53999 127 aaKnown RBP eCLIP10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 MFAP5Q13361 173 aa10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 B3GNTL1Q67FW5 361 aaPredicted RBP10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 TXNIPQ9H3M7 391 aa10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 PRSS1P07477 247 aa10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 ELNP15502 786 aa10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 VWA2Q5GFL6 755 aa10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 DMRTC1Q5HYR2 192 aa10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 TMEM229BQ8NBD8 167 aa10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 TTC9Q92623 222 aa10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 PRRX2Q99811 253 aa10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 PPT2Q9UMR5 302 aa10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 POLR2GP62487 172 aaKnown RBP eCLIP10.65□□□□□ -0.7
SHROOM3-201ENST00000296043 SP3Q02447 781 aa10.65□□□□□ -0.7
SHROOM3-201ENST00000296043 BHLHE23Q8NDY6 225 aa10.65□□□□□ -0.7
SHROOM3-201ENST00000296043 ADAMTS18Q8TE60 1221 aa10.65□□□□□ -0.7
SHROOM3-201ENST00000296043 NEIL1Q96FI4 390 aaPredicted RBP10.65□□□□□ -0.7
SHROOM3-201ENST00000296043 PMS2P1A4D2B8 440 aa10.65□□□□□ -0.7
SHROOM3-201ENST00000296043 TCN2P20062 427 aa10.65□□□□□ -0.7
SHROOM3-201ENST00000296043 OR11H7Q8NGC8 314 aa10.65□□□□□ -0.7
SHROOM3-201ENST00000296043 OR51E1Q8TCB6 317 aa10.65□□□□□ -0.7
SHROOM3-201ENST00000296043 BCL9O00512 1426 aa10.65□□□□□ -0.7
SHROOM3-201ENST00000296043 DRGXA6NNA5 263 aa10.65□□□□□ -0.7
SHROOM3-201ENST00000296043 WNT3P56703 355 aa10.65□□□□□ -0.7
SHROOM3-201ENST00000296043 ARHGAP9Q9BRR9 750 aa10.65□□□□□ -0.7
SHROOM3-201ENST00000296043 PBX4Q9BYU1 374 aa10.65□□□□□ -0.7
SHROOM3-201ENST00000296043 PRSS50Q9UI38 385 aa10.65□□□□□ -0.7
SHROOM3-201ENST00000296043 A0A1W2PQU0 124 aa10.65□□□□□ -0.7
SHROOM3-201ENST00000296043 ADAM20O43506 726 aa10.65□□□□□ -0.7
SHROOM3-201ENST00000296043 TIMM8AO60220 97 aaPredicted RBP10.65□□□□□ -0.7
SHROOM3-201ENST00000296043 CDS2O95674 445 aa10.65□□□□□ -0.7
SHROOM3-201ENST00000296043 TIMM9Q9Y5J7 89 aa10.65□□□□□ -0.7
SHROOM3-201ENST00000296043 C1orf105O95561 183 aa10.65□□□□□ -0.7
SHROOM3-201ENST00000296043 INHBEP58166 350 aa10.65□□□□□ -0.7
SHROOM3-201ENST00000296043 MTURNQ8N3F0 131 aa10.65□□□□□ -0.7
SHROOM3-201ENST00000296043 TMEM116Q8NCL8 245 aa10.65□□□□□ -0.7
SHROOM3-201ENST00000296043 MARVELD1Q9BSK0 173 aa10.65□□□□□ -0.7
SHROOM3-201ENST00000296043 SLC2A4RGQ9NR83 387 aa10.65□□□□□ -0.7
SHROOM3-201ENST00000296043 SNED1Q8TER0 1413 aa10.65□□□□□ -0.7
SHROOM3-201ENST00000296043 KCNAB3O43448 404 aa10.65□□□□□ -0.7
SHROOM3-201ENST00000296043 RNGTTO60942 597 aaKnown RBP10.65□□□□□ -0.7
SHROOM3-201ENST00000296043 CRHP06850 196 aa10.65□□□□□ -0.7
SHROOM3-201ENST00000296043 ABOP16442 354 aa10.65□□□□□ -0.7
SHROOM3-201ENST00000296043 SLC46A1Q96NT5 459 aa10.65□□□□□ -0.7
SHROOM3-201ENST00000296043 SDK2Q58EX2 2172 aa10.65□□□□□ -0.7
SHROOM3-201ENST00000296043 CTSAP10619 480 aa10.65□□□□□ -0.7
SHROOM3-201ENST00000296043 SLC35D3Q5M8T2 416 aa10.65□□□□□ -0.7
SHROOM3-201ENST00000296043 MARCH3Q86UD3 253 aa10.65□□□□□ -0.7
SHROOM3-201ENST00000296043 VN1R1Q9GZP7 353 aa10.65□□□□□ -0.7
SHROOM3-201ENST00000296043 TMEM38AQ9H6F2 299 aa10.65□□□□□ -0.7
SHROOM3-201ENST00000296043 A0A1W2PR80 420 aa10.65□□□□□ -0.71
SHROOM3-201ENST00000296043 MASP2O00187 686 aa10.65□□□□□ -0.71
SHROOM3-201ENST00000296043 ATF1P18846 271 aa10.65□□□□□ -0.71
SHROOM3-201ENST00000296043 TRAT1Q6PIZ9 186 aa10.65□□□□□ -0.71
SHROOM3-201ENST00000296043 RAB24Q969Q5 203 aa10.65□□□□□ -0.71
SHROOM3-201ENST00000296043 MENTQ9BUN1 341 aa10.65□□□□□ -0.71
SHROOM3-201ENST00000296043 SLC22A13Q9Y226 551 aa10.65□□□□□ -0.71
SHROOM3-201ENST00000296043 LSM2Q9Y333 95 aaKnown RBP10.65□□□□□ -0.71
SHROOM3-201ENST00000296043 APBB3O95704 486 aa10.65□□□□□ -0.71
SHROOM3-201ENST00000296043 MMP9P14780 707 aa10.65□□□□□ -0.71
SHROOM3-201ENST00000296043 CNEP1R1Q8N9A8 125 aa10.65□□□□□ -0.71
SHROOM3-201ENST00000296043 WFIKKN1Q96NZ8 548 aa10.65□□□□□ -0.71
SHROOM3-201ENST00000296043 P2RY12Q9H244 342 aa10.65□□□□□ -0.71
SHROOM3-201ENST00000296043 INSL5Q9Y5Q6 135 aa10.65□□□□□ -0.71
SHROOM3-201ENST00000296043 ARHGAP21Q5T5U3 1957 aa10.64□□□□□ -0.71
SHROOM3-201ENST00000296043 DUX1O43812 170 aa10.64□□□□□ -0.71
SHROOM3-201ENST00000296043 CD40P25942 277 aa10.64□□□□□ -0.71
SHROOM3-201ENST00000296043 ZNF124Q15973 351 aa10.64□□□□□ -0.71
SHROOM3-201ENST00000296043 HSD11B1LQ7Z5J1 315 aa10.64□□□□□ -0.71
SHROOM3-201ENST00000296043 EIF4E3Q8N5X7 224 aaKnown RBP10.64□□□□□ -0.71
SHROOM3-201ENST00000296043 OR2J1Q9GZK6 312 aa10.64□□□□□ -0.71
SHROOM3-201ENST00000296043 ZNF732B4DXR9 585 aa10.64□□□□□ -0.71
SHROOM3-201ENST00000296043 Q96M85 177 aa10.64□□□□□ -0.71
SHROOM3-201ENST00000296043 FOXJ3Q9UPW0 622 aa10.64□□□□□ -0.71
SHROOM3-201ENST00000296043 KIR2DS1A0A191URI9 304 aa10.64□□□□□ -0.71
SHROOM3-201ENST00000296043 SLC6A1P30531 599 aa10.64□□□□□ -0.71
SHROOM3-201ENST00000296043 CD70P32970 193 aa10.64□□□□□ -0.71
SHROOM3-201ENST00000296043 KIR2DS4P43632 304 aa10.64□□□□□ -0.71
SHROOM3-201ENST00000296043 TRA2BP62995 288 aaKnown RBP10.64□□□□□ -0.71
SHROOM3-201ENST00000296043 KIR2DS1Q14954 304 aa10.64□□□□□ -0.71
SHROOM3-201ENST00000296043 TMEM64Q6YI46 380 aa10.64□□□□□ -0.71
SHROOM3-201ENST00000296043 ADAMTS17Q8TE56 1095 aa10.64□□□□□ -0.71
SHROOM3-201ENST00000296043 WNT2BQ93097 391 aa10.64□□□□□ -0.71
SHROOM3-201ENST00000296043 TEAD3Q99594 435 aa10.64□□□□□ -0.71
SHROOM3-201ENST00000296043 TMPRSS13Q9BYE2 586 aa10.64□□□□□ -0.71
SHROOM3-201ENST00000296043 GLIPR2Q9H4G4 154 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms