RNA–Protein interactions for RNA: ENST00000294623.8

FUBP1-201, Transcript of far upstream element binding protein 1, humanhuman

TSL 1 (best)

Gene FUBP1, Length 2,201 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP1-201ENST00000294623 MBPP02686 304 aaPredicted RBP12.61□□□□□ -0.39
FUBP1-201ENST00000294623 CT62P0C5K7 136 aa12.61□□□□□ -0.39
FUBP1-201ENST00000294623 CISD3P0C7P0 127 aa12.61□□□□□ -0.39
FUBP1-201ENST00000294623 RPL27P61353 136 aaKnown RBP12.61□□□□□ -0.39
FUBP1-201ENST00000294623 HLA-DRB3P79483 266 aa12.61□□□□□ -0.39
FUBP1-201ENST00000294623 RAB35Q15286 201 aa12.61□□□□□ -0.39
FUBP1-201ENST00000294623 IQCJQ1A5X6 159 aa12.61□□□□□ -0.39
FUBP1-201ENST00000294623 ABLIM2Q6H8Q1 611 aa12.61□□□□□ -0.39
FUBP1-201ENST00000294623 DNM1P34Q6PK57 102 aa12.61□□□□□ -0.39
FUBP1-201ENST00000294623 LANCL3Q6ZV70 420 aa12.61□□□□□ -0.39
FUBP1-201ENST00000294623 OR5D14Q8NGL3 314 aa12.61□□□□□ -0.39
FUBP1-201ENST00000294623 ZNF519Q8TB69 540 aa12.61□□□□□ -0.39
FUBP1-201ENST00000294623 FAM213BQ8TBF2 198 aa12.61□□□□□ -0.39
FUBP1-201ENST00000294623 ZNF558Q96NG5 402 aa12.61□□□□□ -0.39
FUBP1-201ENST00000294623 OR2A5Q96R48 311 aa12.61□□□□□ -0.39
FUBP1-201ENST00000294623 OR14J1Q9UGF5 321 aa12.61□□□□□ -0.39
FUBP1-201ENST00000294623 FOXD3Q9UJU5 478 aaPredicted RBP12.61□□□□□ -0.39
FUBP1-201ENST00000294623 GOLT1BQ9Y3E0 138 aa12.61□□□□□ -0.39
FUBP1-201ENST00000294623 MYOFQ9NZM1 2061 aa12.61□□□□□ -0.39
FUBP1-201ENST00000294623 FANCMQ8IYD8 2048 aa12.6□□□□□ -0.39
FUBP1-201ENST00000294623 TGIF2-C20orf24A0A0A6YYL0 155 aa12.6□□□□□ -0.39
FUBP1-201ENST00000294623 CRYM-AS1A6NIL9 109 aa12.6□□□□□ -0.39
FUBP1-201ENST00000294623 H3BSH0 61 aa12.6□□□□□ -0.39
FUBP1-201ENST00000294623 HSPA12AO43301 675 aa12.6□□□□□ -0.39
FUBP1-201ENST00000294623 FOXS1O43638 330 aa12.6□□□□□ -0.39
FUBP1-201ENST00000294623 PQBP1O60828 265 aaKnown RBP12.6□□□□□ -0.39
FUBP1-201ENST00000294623 SCAF4O95104 1147 aaKnown RBP12.6□□□□□ -0.39
FUBP1-201ENST00000294623 SLC6A8P48029 635 aa12.6□□□□□ -0.39
FUBP1-201ENST00000294623 ZNF77Q15935 545 aa12.6□□□□□ -0.39
FUBP1-201ENST00000294623 TAF9Q16594 264 aa12.6□□□□□ -0.39
FUBP1-201ENST00000294623 GFI1BQ5VTD9 330 aa12.6□□□□□ -0.39
FUBP1-201ENST00000294623 SP5Q6BEB4 398 aaPredicted RBP12.6□□□□□ -0.39
FUBP1-201ENST00000294623 TGIF2LYQ8IUE0 185 aa12.6□□□□□ -0.39
FUBP1-201ENST00000294623 TMEM156Q8N614 296 aa12.6□□□□□ -0.39
FUBP1-201ENST00000294623 OR1P1Q8NH06 330 aa12.6□□□□□ -0.39
FUBP1-201ENST00000294623 GAS2L1Q99501 681 aaPredicted RBP12.6□□□□□ -0.39
FUBP1-201ENST00000294623 TBL1XR1Q9BZK7 514 aa12.6□□□□□ -0.39
FUBP1-201ENST00000294623 SMIM3Q9BZL3 60 aa12.6□□□□□ -0.39
FUBP1-201ENST00000294623 SRD5A3Q9H8P0 318 aa12.6□□□□□ -0.39
FUBP1-201ENST00000294623 SLC2A4RGQ9NR83 387 aa12.6□□□□□ -0.39
FUBP1-201ENST00000294623 DECR2Q9NUI1 292 aa12.6□□□□□ -0.39
FUBP1-201ENST00000294623 MRPL22Q9NWU5 206 aaKnown RBP12.6□□□□□ -0.39
FUBP1-201ENST00000294623 CYP8B1Q9UNU6 501 aa12.6□□□□□ -0.39
FUBP1-201ENST00000294623 LSM5Q9Y4Y9 91 aaKnown RBP12.6□□□□□ -0.39
FUBP1-201ENST00000294623 IGLON5A6NGN9 336 aa12.6□□□□□ -0.39
FUBP1-201ENST00000294623 C4orf47A7E2U8 309 aa12.6□□□□□ -0.39
FUBP1-201ENST00000294623 SERPINA2P20848 420 aa12.6□□□□□ -0.39
FUBP1-201ENST00000294623 PTGER4P35408 488 aa12.6□□□□□ -0.39
FUBP1-201ENST00000294623 PPP1CCP36873 323 aaKnown RBP12.6□□□□□ -0.39
FUBP1-201ENST00000294623 CD200P41217 278 aa12.6□□□□□ -0.39
FUBP1-201ENST00000294623 PDLIM4P50479 330 aa12.6□□□□□ -0.39
FUBP1-201ENST00000294623 NOVA1P51513 510 aaKnown RBP12.6□□□□□ -0.39
FUBP1-201ENST00000294623 CCR4P51679 360 aa12.6□□□□□ -0.39
FUBP1-201ENST00000294623 ERVFC1-1P60608 527 aa12.6□□□□□ -0.39
FUBP1-201ENST00000294623 FAM53BQ14153 422 aa12.6□□□□□ -0.39
FUBP1-201ENST00000294623 PCK2Q16822 640 aa12.6□□□□□ -0.39
FUBP1-201ENST00000294623 C1QL3Q5VWW1 255 aa12.6□□□□□ -0.39
FUBP1-201ENST00000294623 ZCCHC10Q8TBK6 192 aa12.6□□□□□ -0.39
FUBP1-201ENST00000294623 ABHD14BQ96IU4 210 aa12.6□□□□□ -0.39
FUBP1-201ENST00000294623 OR2M4Q96R27 311 aa12.6□□□□□ -0.39
FUBP1-201ENST00000294623 MOB1AQ9H8S9 216 aa12.6□□□□□ -0.39
FUBP1-201ENST00000294623 WSB1Q9Y6I7 421 aa12.6□□□□□ -0.39
FUBP1-201ENST00000294623 MUC22E2RYF6 1773 aaPredicted RBP12.59□□□□□ -0.39
FUBP1-201ENST00000294623 H7C1C5 153 aa12.59□□□□□ -0.39
FUBP1-201ENST00000294623 APODP05090 189 aa12.59□□□□□ -0.39
FUBP1-201ENST00000294623 PCP4P48539 62 aa12.59□□□□□ -0.39
FUBP1-201ENST00000294623 TDGF1P3P51864 188 aa12.59□□□□□ -0.39
FUBP1-201ENST00000294623 LCN6P62502 163 aa12.59□□□□□ -0.39
FUBP1-201ENST00000294623 ID2Q02363 134 aa12.59□□□□□ -0.39
FUBP1-201ENST00000294623 FBXO42Q6P3S6 717 aa12.59□□□□□ -0.39
FUBP1-201ENST00000294623 GNPNAT1Q96EK6 184 aaPredicted RBP12.59□□□□□ -0.39
FUBP1-201ENST00000294623 EMC9Q9Y3B6 208 aa12.59□□□□□ -0.39
FUBP1-201ENST00000294623 SCN5AQ14524 2016 aa12.59□□□□□ -0.39
FUBP1-201ENST00000294623 NSG1A0A0A6YYJ2 146 aa12.58□□□□□ -0.39
FUBP1-201ENST00000294623 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.58□□□□□ -0.39
FUBP1-201ENST00000294623 ZNF727A8MUV8 499 aa12.58□□□□□ -0.39
FUBP1-201ENST00000294623 AMBPP02760 352 aa12.58□□□□□ -0.39
FUBP1-201ENST00000294623 GABRA4P48169 554 aa12.58□□□□□ -0.39
FUBP1-201ENST00000294623 CSNK1A1P48729 337 aa12.58□□□□□ -0.39
FUBP1-201ENST00000294623 RND3P61587 244 aa12.58□□□□□ -0.39
FUBP1-201ENST00000294623 FOXK1P85037 733 aa12.58□□□□□ -0.39
FUBP1-201ENST00000294623 SGCBQ16585 318 aa12.58□□□□□ -0.39
FUBP1-201ENST00000294623 FNDC7Q5VTL7 733 aa12.58□□□□□ -0.39
FUBP1-201ENST00000294623 SPSB3Q6PJ21 355 aa12.58□□□□□ -0.39
FUBP1-201ENST00000294623 FOXRED2Q8IWF2 684 aa12.58□□□□□ -0.39
FUBP1-201ENST00000294623 SULF2Q8IWU5 870 aa12.58□□□□□ -0.39
FUBP1-201ENST00000294623 SYT3Q9BQG1 590 aa12.58□□□□□ -0.39
FUBP1-201ENST00000294623 TXNIPQ9H3M7 391 aa12.58□□□□□ -0.39
FUBP1-201ENST00000294623 WFDC1Q9HC57 220 aa12.58□□□□□ -0.39
FUBP1-201ENST00000294623 CXXC1Q9P0U4 656 aaPredicted RBP12.58□□□□□ -0.39
FUBP1-201ENST00000294623 PILRAQ9UKJ1 303 aa12.58□□□□□ -0.39
FUBP1-201ENST00000294623 CCL26Q9Y258 94 aa12.58□□□□□ -0.39
FUBP1-201ENST00000294623 TRAV36DV7A0A075B6V5 113 aa12.58□□□□□ -0.4
FUBP1-201ENST00000294623 TRAV1-1A0A0B4J248 108 aa12.58□□□□□ -0.4
FUBP1-201ENST00000294623 MANSC4A6NHS7 340 aaPredicted RBP12.58□□□□□ -0.4
FUBP1-201ENST00000294623 A6NIZ1 184 aa12.58□□□□□ -0.4
FUBP1-201ENST00000294623 SERPINE3A8MV23 424 aa12.58□□□□□ -0.4
FUBP1-201ENST00000294623 EREGO14944 169 aa12.58□□□□□ -0.4
FUBP1-201ENST00000294623 TOX3O15405 576 aaPredicted RBP12.58□□□□□ -0.4
FUBP1-201ENST00000294623 PITX3O75364 302 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms