RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 LPAR5Q9H1C0 372 aa7.96□□□□□ -1.13
PDPN-201ENST00000294489 SCP2D1Q9UJQ7 156 aa7.96□□□□□ -1.13
PDPN-201ENST00000294489 ZFHX2Q9C0A1 2572 aaPredicted RBP7.96□□□□□ -1.13
PDPN-201ENST00000294489 GVINP1Q7Z2Y8 2422 aa7.96□□□□□ -1.14
PDPN-201ENST00000294489 SNRPGP15A8MWD9 76 aa7.96□□□□□ -1.14
PDPN-201ENST00000294489 PYCARD-AS1I3L0S3 204 aa7.96□□□□□ -1.14
PDPN-201ENST00000294489 ANXA7P20073 488 aaKnown RBP7.96□□□□□ -1.14
PDPN-201ENST00000294489 AGTR1P30556 359 aa7.96□□□□□ -1.14
PDPN-201ENST00000294489 ARF1P84077 181 aaKnown RBP7.96□□□□□ -1.14
PDPN-201ENST00000294489 MEF2DQ14814 521 aa7.96□□□□□ -1.14
PDPN-201ENST00000294489 C3AR1Q16581 482 aa7.96□□□□□ -1.14
PDPN-201ENST00000294489 SLC22A6Q4U2R8 563 aa7.96□□□□□ -1.14
PDPN-201ENST00000294489 RNF144BQ7Z419 303 aa7.96□□□□□ -1.14
PDPN-201ENST00000294489 ZNF100Q8IYN0 542 aa7.96□□□□□ -1.14
PDPN-201ENST00000294489 TMEM104Q8NE00 496 aa7.96□□□□□ -1.14
PDPN-201ENST00000294489 OR56B1Q8NGI3 324 aa7.96□□□□□ -1.14
PDPN-201ENST00000294489 OR2AE1Q8NHA4 323 aa7.96□□□□□ -1.14
PDPN-201ENST00000294489 ZFAND1Q8TCF1 268 aa7.96□□□□□ -1.14
PDPN-201ENST00000294489 SPSB1Q96BD6 273 aa7.96□□□□□ -1.14
PDPN-201ENST00000294489 CMBLQ96DG6 245 aa7.96□□□□□ -1.14
PDPN-201ENST00000294489 TAAR6Q96RI8 345 aa7.96□□□□□ -1.14
PDPN-201ENST00000294489 IFT46Q9NQC8 304 aa7.96□□□□□ -1.14
PDPN-201ENST00000294489 ZNF69Q9UC07 566 aa7.96□□□□□ -1.14
PDPN-201ENST00000294489 ELF5Q9UKW6 265 aaPredicted RBP7.96□□□□□ -1.14
PDPN-201ENST00000294489 MEIKINA0A087WXM9 373 aa7.96□□□□□ -1.14
PDPN-201ENST00000294489 UBE2QL1A1L167 161 aa7.96□□□□□ -1.14
PDPN-201ENST00000294489 RGS13O14921 159 aa7.96□□□□□ -1.14
PDPN-201ENST00000294489 AMY2AP04746 511 aa7.96□□□□□ -1.14
PDPN-201ENST00000294489 GNB3P16520 340 aa7.96□□□□□ -1.14
PDPN-201ENST00000294489 CXCL3P19876 107 aa7.96□□□□□ -1.14
PDPN-201ENST00000294489 ALDH3B1P43353 468 aa7.96□□□□□ -1.14
PDPN-201ENST00000294489 IFITM2Q01629 132 aa7.96□□□□□ -1.14
PDPN-201ENST00000294489 TNK1Q13470 666 aa7.96□□□□□ -1.14
PDPN-201ENST00000294489 CNN3Q15417 329 aaKnown RBP7.96□□□□□ -1.14
PDPN-201ENST00000294489 SF3B4Q15427 424 aaKnown RBP eCLIP7.96□□□□□ -1.14
PDPN-201ENST00000294489 PABPC1L2AQ5JQF8 200 aa7.96□□□□□ -1.14
PDPN-201ENST00000294489 PLXDC2Q6UX71 529 aa7.96□□□□□ -1.14
PDPN-201ENST00000294489 NUFIP2Q7Z417 695 aaKnown RBP7.96□□□□□ -1.14
PDPN-201ENST00000294489 FGFBP3Q8TAT2 258 aa7.96□□□□□ -1.14
PDPN-201ENST00000294489 TNFAIP8L1Q8WVP5 186 aa7.96□□□□□ -1.14
PDPN-201ENST00000294489 RAB3CQ96E17 227 aa7.96□□□□□ -1.14
PDPN-201ENST00000294489 GMPPAQ96IJ6 420 aaPredicted RBP7.96□□□□□ -1.14
PDPN-201ENST00000294489 C1orf147Q96MC9 270 aaPredicted RBP7.96□□□□□ -1.14
PDPN-201ENST00000294489 SLC25A21Q9BQT8 299 aaPredicted RBP7.96□□□□□ -1.14
PDPN-201ENST00000294489 SEC22CQ9BRL7 303 aa7.96□□□□□ -1.14
PDPN-201ENST00000294489 TMEM246Q9BRR3 403 aa7.96□□□□□ -1.14
PDPN-201ENST00000294489 SCNM1Q9BWG6 230 aa7.96□□□□□ -1.14
PDPN-201ENST00000294489 BANF2Q9H503 90 aa7.96□□□□□ -1.14
PDPN-201ENST00000294489 PTTG3PQ9NZH4 202 aa7.96□□□□□ -1.14
PDPN-201ENST00000294489 SLC22A20A6NK97 555 aa7.95□□□□□ -1.14
PDPN-201ENST00000294489 DISC1C4P0D8 188 aa7.95□□□□□ -1.14
PDPN-201ENST00000294489 SMLR1H3BR10 107 aa7.95□□□□□ -1.14
PDPN-201ENST00000294489 PDGFAP04085 211 aa7.95□□□□□ -1.14
PDPN-201ENST00000294489 CD74P04233 296 aa7.95□□□□□ -1.14
PDPN-201ENST00000294489 GSTP1P09211 210 aaKnown RBP7.95□□□□□ -1.14
PDPN-201ENST00000294489 OR3A2P47893 321 aa7.95□□□□□ -1.14
PDPN-201ENST00000294489 GNG2P59768 71 aa7.95□□□□□ -1.14
PDPN-201ENST00000294489 HGFACQ04756 655 aa7.95□□□□□ -1.14
PDPN-201ENST00000294489 FOXC1Q12948 553 aa7.95□□□□□ -1.14
PDPN-201ENST00000294489 RNASE10Q5GAN6 216 aaKnown RBP7.95□□□□□ -1.14
PDPN-201ENST00000294489 DMRTC1Q5HYR2 192 aa7.95□□□□□ -1.14
PDPN-201ENST00000294489 RBMXL3Q8N7X1 1067 aaKnown RBP7.95□□□□□ -1.14
PDPN-201ENST00000294489 ASCC1Q8N9N2 400 aaKnown RBP7.95□□□□□ -1.14
PDPN-201ENST00000294489 OR5D18Q8NGL1 313 aa7.95□□□□□ -1.14
PDPN-201ENST00000294489 NICN1Q9BSH3 213 aa7.95□□□□□ -1.14
PDPN-201ENST00000294489 NPDC1Q9NQX5 325 aaPredicted RBP7.95□□□□□ -1.14
PDPN-201ENST00000294489 BOLA1Q9Y3E2 137 aa7.95□□□□□ -1.14
PDPN-201ENST00000294489 AKAP13Q12802 2813 aa7.95□□□□□ -1.14
PDPN-201ENST00000294489 OR14I1A6ND48 311 aa7.95□□□□□ -1.14
PDPN-201ENST00000294489 M0QYG6 137 aa7.95□□□□□ -1.14
PDPN-201ENST00000294489 XRCC2O43543 280 aa7.95□□□□□ -1.14
PDPN-201ENST00000294489 WISP2O76076 250 aa7.95□□□□□ -1.14
PDPN-201ENST00000294489 COX5BP10606 129 aa7.95□□□□□ -1.14
PDPN-201ENST00000294489 PRKACBP22694 351 aa7.95□□□□□ -1.14
PDPN-201ENST00000294489 EIF2S3P41091 472 aaKnown RBP7.95□□□□□ -1.14
PDPN-201ENST00000294489 C9orf135Q5VTT2 229 aa7.95□□□□□ -1.14
PDPN-201ENST00000294489 ZNF626Q68DY1 528 aa7.95□□□□□ -1.14
PDPN-201ENST00000294489 IDO2Q6ZQW0 420 aa7.95□□□□□ -1.14
PDPN-201ENST00000294489 BPIFB2Q8N4F0 458 aa7.95□□□□□ -1.14
PDPN-201ENST00000294489 STEAP2Q8NFT2 490 aa7.95□□□□□ -1.14
PDPN-201ENST00000294489 CCDC107Q8WV48 283 aa7.95□□□□□ -1.14
PDPN-201ENST00000294489 NUDCD2Q8WVJ2 157 aa7.95□□□□□ -1.14
PDPN-201ENST00000294489 PIGTQ969N2 578 aa7.95□□□□□ -1.14
PDPN-201ENST00000294489 TINAGL1Q9GZM7 467 aaPredicted RBP7.95□□□□□ -1.14
PDPN-201ENST00000294489 ELL3Q9HB65 397 aaPredicted RBP7.95□□□□□ -1.14
PDPN-201ENST00000294489 PLEKHA6Q9Y2H5 1048 aa7.95□□□□□ -1.14
PDPN-201ENST00000294489 ZNF407Q9C0G0 2248 aa7.94□□□□□ -1.14
PDPN-201ENST00000294489 A0A096LPE4 126 aa7.94□□□□□ -1.14
PDPN-201ENST00000294489 A0A1W2PPZ6 126 aa7.94□□□□□ -1.14
PDPN-201ENST00000294489 WIPF3A6NGB9 483 aa7.94□□□□□ -1.14
PDPN-201ENST00000294489 HIST1H1DP16402 221 aaKnown RBP7.94□□□□□ -1.14
PDPN-201ENST00000294489 ACKR3P25106 362 aa7.94□□□□□ -1.14
PDPN-201ENST00000294489 MTCP1P56278 107 aa7.94□□□□□ -1.14
PDPN-201ENST00000294489 CLVS2Q5SYC1 327 aa7.94□□□□□ -1.14
PDPN-201ENST00000294489 DPPA2Q7Z7J5 298 aa7.94□□□□□ -1.14
PDPN-201ENST00000294489 OR51T1Q8NGJ9 327 aa7.94□□□□□ -1.14
PDPN-201ENST00000294489 MS4A3Q96HJ5 214 aa7.94□□□□□ -1.14
PDPN-201ENST00000294489 PRRT1Q99946 306 aa7.94□□□□□ -1.14
PDPN-201ENST00000294489 ZNF436Q9C0F3 470 aaPredicted RBP7.94□□□□□ -1.14
PDPN-201ENST00000294489 SLA2Q9H6Q3 261 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms