RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 REEP6Q96HR9 211 aa10.65□□□□□ -0.71
SYNGAP1-201ENST00000293748 CHST11Q9NPF2 352 aa10.65□□□□□ -0.71
SYNGAP1-201ENST00000293748 SSUH2Q9Y2M2 353 aa10.65□□□□□ -0.71
SYNGAP1-201ENST00000293748 R4GMQ9 66 aa10.65□□□□□ -0.71
SYNGAP1-201ENST00000293748 ANKRD61A6NGH8 418 aa10.64□□□□□ -0.71
SYNGAP1-201ENST00000293748 K7EQM0 130 aa10.64□□□□□ -0.71
SYNGAP1-201ENST00000293748 SDCBPO00560 298 aaPredicted RBP10.64□□□□□ -0.71
SYNGAP1-201ENST00000293748 HSD17B6O14756 317 aa10.64□□□□□ -0.71
SYNGAP1-201ENST00000293748 SSR4P51571 173 aa10.64□□□□□ -0.71
SYNGAP1-201ENST00000293748 HSF1Q00613 529 aa10.64□□□□□ -0.71
SYNGAP1-201ENST00000293748 MPPED2Q15777 294 aa10.64□□□□□ -0.71
SYNGAP1-201ENST00000293748 LTC4SQ16873 150 aa10.64□□□□□ -0.71
SYNGAP1-201ENST00000293748 C9orf135Q5VTT2 229 aa10.64□□□□□ -0.71
SYNGAP1-201ENST00000293748 TMEM268Q5VZI3 342 aa10.64□□□□□ -0.71
SYNGAP1-201ENST00000293748 NCR3LG1Q68D85 454 aa10.64□□□□□ -0.71
SYNGAP1-201ENST00000293748 OR11L1Q8NGX0 322 aa10.64□□□□□ -0.71
SYNGAP1-201ENST00000293748 BAHD1Q8TBE0 780 aaPredicted RBP10.64□□□□□ -0.71
SYNGAP1-201ENST00000293748 CORO2AQ92828 525 aa10.64□□□□□ -0.71
SYNGAP1-201ENST00000293748 FGF11Q92914 225 aa10.64□□□□□ -0.71
SYNGAP1-201ENST00000293748 ZNF775Q96BV0 537 aaPredicted RBP10.64□□□□□ -0.71
SYNGAP1-201ENST00000293748 CDCP1Q9H5V8 836 aa10.64□□□□□ -0.71
SYNGAP1-201ENST00000293748 ZNF346Q9UL40 294 aaKnown RBP10.64□□□□□ -0.71
SYNGAP1-201ENST00000293748 TRAV20A0A0B4J274 112 aa10.64□□□□□ -0.71
SYNGAP1-201ENST00000293748 PRAMEF25A6NGN4 478 aa10.64□□□□□ -0.71
SYNGAP1-201ENST00000293748 BSGP35613 385 aa10.64□□□□□ -0.71
SYNGAP1-201ENST00000293748 HLXQ14774 488 aaPredicted RBP10.64□□□□□ -0.71
SYNGAP1-201ENST00000293748 FAM27D1Q5T7N8 215 aa10.64□□□□□ -0.71
SYNGAP1-201ENST00000293748 PRAMEF20Q5VT98 475 aa10.64□□□□□ -0.71
SYNGAP1-201ENST00000293748 HSD17B13Q7Z5P4 300 aaPredicted RBP10.64□□□□□ -0.71
SYNGAP1-201ENST00000293748 OR52B4Q8NGK2 314 aa10.64□□□□□ -0.71
SYNGAP1-201ENST00000293748 OR4F5Q8NH21 305 aa10.64□□□□□ -0.71
SYNGAP1-201ENST00000293748 GPR119Q8TDV5 335 aa10.64□□□□□ -0.71
SYNGAP1-201ENST00000293748 OR4F4Q96R69 305 aa10.64□□□□□ -0.71
SYNGAP1-201ENST00000293748 NARFLQ9H6Q4 476 aa10.64□□□□□ -0.71
SYNGAP1-201ENST00000293748 SLC17A5Q9NRA2 495 aa10.64□□□□□ -0.71
SYNGAP1-201ENST00000293748 MMP26Q9NRE1 261 aa10.64□□□□□ -0.71
SYNGAP1-201ENST00000293748 PPP1R14DQ9NXH3 145 aa10.64□□□□□ -0.71
SYNGAP1-201ENST00000293748 IGHEP01854 428 aa10.64□□□□□ -0.71
SYNGAP1-201ENST00000293748 RD3LP0DJH9 198 aa10.64□□□□□ -0.71
SYNGAP1-201ENST00000293748 PAX6P26367 422 aa10.64□□□□□ -0.71
SYNGAP1-201ENST00000293748 CRYBB2P43320 205 aa10.64□□□□□ -0.71
SYNGAP1-201ENST00000293748 RPL18Q07020 188 aaKnown RBP10.64□□□□□ -0.71
SYNGAP1-201ENST00000293748 C17orf82Q86X59 251 aaPredicted RBP10.64□□□□□ -0.71
SYNGAP1-201ENST00000293748 OR52N5Q8NH56 324 aa10.64□□□□□ -0.71
SYNGAP1-201ENST00000293748 ZCCHC14Q8WYQ9 949 aaKnown RBP10.64□□□□□ -0.71
SYNGAP1-201ENST00000293748 RPUSD4Q96CM3 377 aaKnown RBP10.64□□□□□ -0.71
SYNGAP1-201ENST00000293748 DLL4Q9NR61 685 aa10.64□□□□□ -0.71
SYNGAP1-201ENST00000293748 IL20Q9NYY1 176 aa10.64□□□□□ -0.71
SYNGAP1-201ENST00000293748 GDF2Q9UK05 429 aaPredicted RBP10.64□□□□□ -0.71
SYNGAP1-201ENST00000293748 A0A1B0GTL3 188 aa10.63□□□□□ -0.71
SYNGAP1-201ENST00000293748 SCRG1O75711 98 aa10.63□□□□□ -0.71
SYNGAP1-201ENST00000293748 FABP1P07148 127 aa10.63□□□□□ -0.71
SYNGAP1-201ENST00000293748 ANKRD34CP0C6C1 535 aa10.63□□□□□ -0.71
SYNGAP1-201ENST00000293748 COX5AP20674 150 aa10.63□□□□□ -0.71
SYNGAP1-201ENST00000293748 PNLIPRP3Q17RR3 467 aa10.63□□□□□ -0.71
SYNGAP1-201ENST00000293748 ZDHHC22Q8N966 263 aa10.63□□□□□ -0.71
SYNGAP1-201ENST00000293748 ZFP62Q8NB50 900 aaPredicted RBP10.63□□□□□ -0.71
SYNGAP1-201ENST00000293748 DUSP18Q8NEJ0 188 aa10.63□□□□□ -0.71
SYNGAP1-201ENST00000293748 GOT1L1Q8NHS2 421 aaPredicted RBP10.63□□□□□ -0.71
SYNGAP1-201ENST00000293748 SLC35D1Q9NTN3 355 aa10.63□□□□□ -0.71
SYNGAP1-201ENST00000293748 V9GYS6 101 aa10.63□□□□□ -0.71
SYNGAP1-201ENST00000293748 ANKRD36A6QL64 1941 aa10.63□□□□□ -0.71
SYNGAP1-201ENST00000293748 IGHV5-10-1A0A0J9YXX1 117 aa10.63□□□□□ -0.71
SYNGAP1-201ENST00000293748 GFERP55789 205 aa10.63□□□□□ -0.71
SYNGAP1-201ENST00000293748 CARD18P57730 90 aa10.63□□□□□ -0.71
SYNGAP1-201ENST00000293748 VAMP3Q15836 100 aa10.63□□□□□ -0.71
SYNGAP1-201ENST00000293748 ZNF626Q68DY1 528 aa10.63□□□□□ -0.71
SYNGAP1-201ENST00000293748 DND1Q8IYX4 353 aaKnown RBP10.63□□□□□ -0.71
SYNGAP1-201ENST00000293748 OR10P1Q8NGE3 313 aa10.63□□□□□ -0.71
SYNGAP1-201ENST00000293748 RTN4IP1Q8WWV3 396 aaPredicted RBP10.63□□□□□ -0.71
SYNGAP1-201ENST00000293748 LAT2Q9GZY6 243 aa10.63□□□□□ -0.71
SYNGAP1-201ENST00000293748 CTSFQ9UBX1 484 aa10.63□□□□□ -0.71
SYNGAP1-201ENST00000293748 CST4P01036 141 aa10.63□□□□□ -0.71
SYNGAP1-201ENST00000293748 GLI4P10075 376 aa10.63□□□□□ -0.71
SYNGAP1-201ENST00000293748 PI3P19957 117 aa10.63□□□□□ -0.71
SYNGAP1-201ENST00000293748 TCN2P20062 427 aa10.63□□□□□ -0.71
SYNGAP1-201ENST00000293748 KCNJ3P48549 501 aa10.63□□□□□ -0.71
SYNGAP1-201ENST00000293748 SUMO1P63165 101 aaKnown RBP10.63□□□□□ -0.71
SYNGAP1-201ENST00000293748 ARG2P78540 354 aa10.63□□□□□ -0.71
SYNGAP1-201ENST00000293748 DCDP81605 110 aaKnown RBP10.63□□□□□ -0.71
SYNGAP1-201ENST00000293748 DHODHQ02127 395 aa10.63□□□□□ -0.71
SYNGAP1-201ENST00000293748 ACOT6Q3I5F7 207 aaPredicted RBP10.63□□□□□ -0.71
SYNGAP1-201ENST00000293748 C4orf17Q53FE4 359 aa10.63□□□□□ -0.71
SYNGAP1-201ENST00000293748 LAMP3Q9UQV4 416 aa10.63□□□□□ -0.71
SYNGAP1-201ENST00000293748 DEGS1O15121 323 aa10.63□□□□□ -0.71
SYNGAP1-201ENST00000293748 ZIC2O95409 532 aaPredicted RBP10.63□□□□□ -0.71
SYNGAP1-201ENST00000293748 EML2O95834 649 aa10.63□□□□□ -0.71
SYNGAP1-201ENST00000293748 OR10J4P0C629 311 aa10.63□□□□□ -0.71
SYNGAP1-201ENST00000293748 SFTA3P0C7M3 94 aa10.63□□□□□ -0.71
SYNGAP1-201ENST00000293748 NTF3P20783 257 aa10.63□□□□□ -0.71
SYNGAP1-201ENST00000293748 SPANXN5Q5MJ07 72 aa10.63□□□□□ -0.71
SYNGAP1-201ENST00000293748 C6orf15Q6UXA7 325 aaPredicted RBP10.63□□□□□ -0.71
SYNGAP1-201ENST00000293748 OR2W3Q7Z3T1 314 aa10.63□□□□□ -0.71
SYNGAP1-201ENST00000293748 CNEP1R1Q8N9A8 125 aa10.63□□□□□ -0.71
SYNGAP1-201ENST00000293748 CXorf58Q96LI9 332 aa10.63□□□□□ -0.71
SYNGAP1-201ENST00000293748 CRLF2Q9HC73 371 aa10.63□□□□□ -0.71
SYNGAP1-201ENST00000293748 SIRT5Q9NXA8 310 aa10.63□□□□□ -0.71
SYNGAP1-201ENST00000293748 ASH2LQ9UBL3 628 aa10.63□□□□□ -0.71
SYNGAP1-201ENST00000293748 A0A1W2PPQ1 181 aa10.62□□□□□ -0.71
SYNGAP1-201ENST00000293748 A0A1W2PQM1 296 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms