RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 TBPP20226 339 aa13.76□□□□□ -0.21
SHROOM4-201ENST00000289292 TOMM34Q15785 309 aaPredicted RBP13.76□□□□□ -0.21
SHROOM4-201ENST00000289292 TMEM215Q68D42 235 aa13.76□□□□□ -0.21
SHROOM4-201ENST00000289292 TMEM37Q8WXS4 190 aa13.76□□□□□ -0.21
SHROOM4-201ENST00000289292 ISOC2Q96AB3 205 aa13.76□□□□□ -0.21
SHROOM4-201ENST00000289292 FAM173AQ9BQD7 235 aa13.76□□□□□ -0.21
SHROOM4-201ENST00000289292 TMPRSS5Q9H3S3 457 aa13.76□□□□□ -0.21
SHROOM4-201ENST00000289292 MBD1Q9UIS9 605 aaPredicted RBP13.76□□□□□ -0.21
SHROOM4-201ENST00000289292 BTBD17A6NE02 478 aa13.76□□□□□ -0.21
SHROOM4-201ENST00000289292 RGS13O14921 159 aa13.76□□□□□ -0.21
SHROOM4-201ENST00000289292 PLA2G10O15496 165 aa13.76□□□□□ -0.21
SHROOM4-201ENST00000289292 KCNAB3O43448 404 aa13.76□□□□□ -0.21
SHROOM4-201ENST00000289292 DEFA4P12838 97 aa13.76□□□□□ -0.21
SHROOM4-201ENST00000289292 SLC6A1P30531 599 aa13.76□□□□□ -0.21
SHROOM4-201ENST00000289292 CMTM2Q8TAZ6 248 aa13.76□□□□□ -0.21
SHROOM4-201ENST00000289292 CHAC2Q8WUX2 184 aa13.76□□□□□ -0.21
SHROOM4-201ENST00000289292 DOCK1Q14185 1865 aa13.75□□□□□ -0.21
SHROOM4-201ENST00000289292 SIGLEC5O15389 551 aa13.75□□□□□ -0.21
SHROOM4-201ENST00000289292 YKT6O15498 198 aa13.75□□□□□ -0.21
SHROOM4-201ENST00000289292 LINC01565O15544 149 aa13.75□□□□□ -0.21
SHROOM4-201ENST00000289292 SIGLEC14Q08ET2 396 aa13.75□□□□□ -0.21
SHROOM4-201ENST00000289292 TOMM20LQ6UXN7 152 aa13.75□□□□□ -0.21
SHROOM4-201ENST00000289292 PINX1Q96BK5 328 aaKnown RBP13.75□□□□□ -0.21
SHROOM4-201ENST00000289292 ZDHHC11Q9H8X9 412 aa13.75□□□□□ -0.21
SHROOM4-201ENST00000289292 IGLV3-16A0A075B6K0 115 aa13.75□□□□□ -0.21
SHROOM4-201ENST00000289292 CXCL13O43927 109 aa13.75□□□□□ -0.21
SHROOM4-201ENST00000289292 SPINK2P20155 84 aa13.75□□□□□ -0.21
SHROOM4-201ENST00000289292 HMGA2P52926 109 aa13.75□□□□□ -0.21
SHROOM4-201ENST00000289292 ZXDAP98168 799 aa13.75□□□□□ -0.21
SHROOM4-201ENST00000289292 SSBP1Q04837 148 aaKnown RBP13.75□□□□□ -0.21
SHROOM4-201ENST00000289292 PRR27Q6MZM9 219 aa13.75□□□□□ -0.21
SHROOM4-201ENST00000289292 DTWD2Q8NBA8 298 aa13.75□□□□□ -0.21
SHROOM4-201ENST00000289292 OR4C3Q8NH37 302 aa13.75□□□□□ -0.21
SHROOM4-201ENST00000289292 HSPB2A8KAH6 182 aa13.75□□□□□ -0.21
SHROOM4-201ENST00000289292 H0YIG0 161 aa13.75□□□□□ -0.21
SHROOM4-201ENST00000289292 FPR2P25090 351 aa13.75□□□□□ -0.21
SHROOM4-201ENST00000289292 UBE2G1P62253 170 aa13.75□□□□□ -0.21
SHROOM4-201ENST00000289292 HSPB2Q16082 182 aa13.75□□□□□ -0.21
SHROOM4-201ENST00000289292 LRP11Q86VZ4 500 aa13.75□□□□□ -0.21
SHROOM4-201ENST00000289292 RPS19BP1Q86WX3 136 aaKnown RBP13.75□□□□□ -0.21
SHROOM4-201ENST00000289292 SPICQ8N5J4 248 aa13.75□□□□□ -0.21
SHROOM4-201ENST00000289292 OR4C5Q8NGB2 326 aa13.75□□□□□ -0.21
SHROOM4-201ENST00000289292 PLPPR2Q96GM1 343 aa13.75□□□□□ -0.21
SHROOM4-201ENST00000289292 MMP25Q9NPA2 562 aa13.75□□□□□ -0.21
SHROOM4-201ENST00000289292 A0A1W2PNV4 684 aa13.75□□□□□ -0.21
SHROOM4-201ENST00000289292 SH2D1BO14796 132 aa13.75□□□□□ -0.21
SHROOM4-201ENST00000289292 CT62P0C5K7 136 aa13.75□□□□□ -0.21
SHROOM4-201ENST00000289292 CT45A6P0DMU7 189 aa13.75□□□□□ -0.21
SHROOM4-201ENST00000289292 CT45A5P0DMU8 189 aa13.75□□□□□ -0.21
SHROOM4-201ENST00000289292 CT45A7P0DMV0 189 aa13.75□□□□□ -0.21
SHROOM4-201ENST00000289292 CT45A8P0DMV1 189 aa13.75□□□□□ -0.21
SHROOM4-201ENST00000289292 CT45A9P0DMV2 189 aa13.75□□□□□ -0.21
SHROOM4-201ENST00000289292 NDUFB7P17568 137 aa13.75□□□□□ -0.21
SHROOM4-201ENST00000289292 CAPZBP47756 277 aa13.75□□□□□ -0.21
SHROOM4-201ENST00000289292 ENDOGQ14249 297 aaKnown RBP13.75□□□□□ -0.21
SHROOM4-201ENST00000289292 EXT1Q16394 746 aa13.75□□□□□ -0.21
SHROOM4-201ENST00000289292 CT45A2Q5DJT8 189 aa13.75□□□□□ -0.21
SHROOM4-201ENST00000289292 CT45A1Q5HYN5 189 aa13.75□□□□□ -0.21
SHROOM4-201ENST00000289292 SFTPA1Q8IWL2 248 aa13.75□□□□□ -0.21
SHROOM4-201ENST00000289292 BVESQ8NE79 360 aa13.75□□□□□ -0.21
SHROOM4-201ENST00000289292 CT45A3Q8NHU0 189 aa13.75□□□□□ -0.21
SHROOM4-201ENST00000289292 NTMQ9P121 344 aa13.75□□□□□ -0.21
SHROOM4-201ENST00000289292 ARG1P05089 322 aa13.75□□□□□ -0.21
SHROOM4-201ENST00000289292 GPR12P47775 334 aa13.75□□□□□ -0.21
SHROOM4-201ENST00000289292 GNB4Q9HAV0 340 aa13.75□□□□□ -0.21
SHROOM4-201ENST00000289292 CTSVO60911 334 aa13.74□□□□□ -0.21
SHROOM4-201ENST00000289292 MPC2O95563 127 aa13.74□□□□□ -0.21
SHROOM4-201ENST00000289292 DAOP14920 347 aa13.74□□□□□ -0.21
SHROOM4-201ENST00000289292 PJVKQ0ZLH3 352 aa13.74□□□□□ -0.21
SHROOM4-201ENST00000289292 PRICKLE4Q2TBC4 344 aa13.74□□□□□ -0.21
SHROOM4-201ENST00000289292 C6orf201Q7Z4U5 140 aa13.74□□□□□ -0.21
SHROOM4-201ENST00000289292 MORN4Q8NDC4 146 aa13.74□□□□□ -0.21
SHROOM4-201ENST00000289292 OR5B3Q8NH48 314 aa13.74□□□□□ -0.21
SHROOM4-201ENST00000289292 IFI44Q8TCB0 444 aa13.74□□□□□ -0.21
SHROOM4-201ENST00000289292 CNTD2Q9H8S5 307 aa13.74□□□□□ -0.21
SHROOM4-201ENST00000289292 HPXP02790 462 aa13.74□□□□□ -0.21
SHROOM4-201ENST00000289292 PMCHP20382 165 aa13.74□□□□□ -0.21
SHROOM4-201ENST00000289292 ZNF92Q03936 586 aa13.74□□□□□ -0.21
SHROOM4-201ENST00000289292 ACOT6Q3I5F7 207 aaPredicted RBP13.74□□□□□ -0.21
SHROOM4-201ENST00000289292 RGP1Q92546 391 aaPredicted RBP13.74□□□□□ -0.21
SHROOM4-201ENST00000289292 FAAP24Q9BTP7 215 aa13.74□□□□□ -0.21
SHROOM4-201ENST00000289292 FOXQ1Q9C009 403 aa13.74□□□□□ -0.21
SHROOM4-201ENST00000289292 ZGLP1P0C6A0 271 aa13.74□□□□□ -0.21
SHROOM4-201ENST00000289292 SPINK9Q5DT21 86 aa13.74□□□□□ -0.21
SHROOM4-201ENST00000289292 ZNF66Q6ZN08 573 aa13.74□□□□□ -0.21
SHROOM4-201ENST00000289292 UBE3DQ7Z6J8 389 aa13.74□□□□□ -0.21
SHROOM4-201ENST00000289292 MRGPREQ86SM8 312 aa13.74□□□□□ -0.21
SHROOM4-201ENST00000289292 OR1J1Q8NGS3 322 aa13.74□□□□□ -0.21
SHROOM4-201ENST00000289292 PRRX2Q99811 253 aa13.74□□□□□ -0.21
SHROOM4-201ENST00000289292 VAMP8Q9BV40 100 aa13.74□□□□□ -0.21
SHROOM4-201ENST00000289292 VN1R1Q9GZP7 353 aa13.74□□□□□ -0.21
SHROOM4-201ENST00000289292 RIMS4Q9H426 269 aaPredicted RBP13.74□□□□□ -0.21
SHROOM4-201ENST00000289292 ZMAT5Q9UDW3 170 aaKnown RBP13.74□□□□□ -0.21
SHROOM4-201ENST00000289292 SIT1Q9Y3P8 196 aa13.74□□□□□ -0.21
SHROOM4-201ENST00000289292 ADAM20O43506 726 aa13.74□□□□□ -0.21
SHROOM4-201ENST00000289292 SFT2D2O95562 160 aa13.74□□□□□ -0.21
SHROOM4-201ENST00000289292 CD63P08962 238 aa13.74□□□□□ -0.21
SHROOM4-201ENST00000289292 FCER1GP30273 86 aa13.74□□□□□ -0.21
SHROOM4-201ENST00000289292 FGF8P55075 233 aaPredicted RBP13.74□□□□□ -0.21
SHROOM4-201ENST00000289292 ETFDHQ16134 617 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms