RNA–Protein interactions for RNA: ENST00000286428.5

VBP1-201, Transcript of VHL binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VBP1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-201ENST00000286428 PEX14O75381 377 aa16.44■□□□□ 0.22
VBP1-201ENST00000286428 CSTBP04080 98 aaKnown RBP16.44■□□□□ 0.22
VBP1-201ENST00000286428 HOXD4P09016 255 aaPredicted RBP16.44■□□□□ 0.22
VBP1-201ENST00000286428 EDN3P14138 238 aa16.44■□□□□ 0.22
VBP1-201ENST00000286428 CPT2P23786 658 aa16.44■□□□□ 0.22
VBP1-201ENST00000286428 RRAS2P62070 204 aaPredicted RBP16.44■□□□□ 0.22
VBP1-201ENST00000286428 RBMS2Q15434 407 aaKnown RBP16.44■□□□□ 0.22
VBP1-201ENST00000286428 TBC1D28Q2M2D7 210 aa16.44■□□□□ 0.22
VBP1-201ENST00000286428 SLC22A6Q4U2R8 563 aa16.44■□□□□ 0.22
VBP1-201ENST00000286428 STEAP1BQ6NZ63 245 aa16.44■□□□□ 0.22
VBP1-201ENST00000286428 INO80CQ6PI98 192 aaPredicted RBP16.44■□□□□ 0.22
VBP1-201ENST00000286428 GABRG1Q8N1C3 465 aa16.44■□□□□ 0.22
VBP1-201ENST00000286428 CNEP1R1Q8N9A8 125 aa16.44■□□□□ 0.22
VBP1-201ENST00000286428 RAB3CQ96E17 227 aa16.44■□□□□ 0.22
VBP1-201ENST00000286428 GPR137Q96N19 417 aa16.44■□□□□ 0.22
VBP1-201ENST00000286428 EIF3KQ9UBQ5 218 aaKnown RBP16.44■□□□□ 0.22
VBP1-201ENST00000286428 FREM2Q5SZK8 3169 aa16.44■□□□□ 0.22
VBP1-201ENST00000286428 C7orf66A4D0T2 115 aa16.43■□□□□ 0.22
VBP1-201ENST00000286428 FIGNL2A6NMB9 653 aa16.43■□□□□ 0.22
VBP1-201ENST00000286428 TBPP20226 339 aa16.43■□□□□ 0.22
VBP1-201ENST00000286428 CBX5P45973 191 aa16.43■□□□□ 0.22
VBP1-201ENST00000286428 PER3P56645 1201 aa16.43■□□□□ 0.22
VBP1-201ENST00000286428 RPS27AP62979 156 aaKnown RBP16.43■□□□□ 0.22
VBP1-201ENST00000286428 MEF2DQ14814 521 aa16.43■□□□□ 0.22
VBP1-201ENST00000286428 ZNF585AQ6P3V2 769 aa16.43■□□□□ 0.22
VBP1-201ENST00000286428 FAM89BQ8N5H3 189 aa16.43■□□□□ 0.22
VBP1-201ENST00000286428 RBMXL3Q8N7X1 1067 aaKnown RBP16.43■□□□□ 0.22
VBP1-201ENST00000286428 OR51T1Q8NGJ9 327 aa16.43■□□□□ 0.22
VBP1-201ENST00000286428 NPRL2Q8WTW4 380 aa16.43■□□□□ 0.22
VBP1-201ENST00000286428 MRPS24Q96EL2 167 aaKnown RBP16.43■□□□□ 0.22
VBP1-201ENST00000286428 POM121Q96HA1 1249 aa16.43■□□□□ 0.22
VBP1-201ENST00000286428 C1orf147Q96MC9 270 aaPredicted RBP16.43■□□□□ 0.22
VBP1-201ENST00000286428 SELENOIQ9C0D9 397 aa16.43■□□□□ 0.22
VBP1-201ENST00000286428 NOX3Q9HBY0 568 aa16.43■□□□□ 0.22
VBP1-201ENST00000286428 MOV10Q9HCE1 1003 aaKnown RBP16.43■□□□□ 0.22
VBP1-201ENST00000286428 PLSCR4Q9NRQ2 329 aa16.43■□□□□ 0.22
VBP1-201ENST00000286428 ZNF736B4DX44 427 aaPredicted RBP16.43■□□□□ 0.22
VBP1-201ENST00000286428 TMEM225BP0DP42 221 aa16.43■□□□□ 0.22
VBP1-201ENST00000286428 GNG2P59768 71 aa16.43■□□□□ 0.22
VBP1-201ENST00000286428 PPA1Q15181 289 aa16.43■□□□□ 0.22
VBP1-201ENST00000286428 MOGAT2Q3SYC2 334 aa16.43■□□□□ 0.22
VBP1-201ENST00000286428 HIKESHIQ53FT3 197 aa16.43■□□□□ 0.22
VBP1-201ENST00000286428 FAM180AQ6UWF9 173 aa16.43■□□□□ 0.22
VBP1-201ENST00000286428 UNQ6126/PRO20091Q6UXV3 157 aa16.43■□□□□ 0.22
VBP1-201ENST00000286428 MOB3CQ70IA8 216 aa16.43■□□□□ 0.22
VBP1-201ENST00000286428 SPACA3Q8IXA5 215 aa16.43■□□□□ 0.22
VBP1-201ENST00000286428 GCNT2Q8N0V5 402 aa16.43■□□□□ 0.22
VBP1-201ENST00000286428 PIGCQ92535 297 aa16.43■□□□□ 0.22
VBP1-201ENST00000286428 MED30Q96HR3 178 aa16.43■□□□□ 0.22
VBP1-201ENST00000286428 TM2D1Q9BX74 207 aa16.43■□□□□ 0.22
VBP1-201ENST00000286428 ELL3Q9HB65 397 aaPredicted RBP16.43■□□□□ 0.22
VBP1-201ENST00000286428 SCP2D1Q9UJQ7 156 aa16.43■□□□□ 0.22
VBP1-201ENST00000286428 CNOT1A5YKK6 2376 aaKnown RBP16.42■□□□□ 0.22
VBP1-201ENST00000286428 A0A0B4J293 547 aa16.42■□□□□ 0.22
VBP1-201ENST00000286428 FAM230AA0A1W2PPH8 454 aa16.42■□□□□ 0.22
VBP1-201ENST00000286428 MBD3L4A6NDZ8 208 aaPredicted RBP16.42■□□□□ 0.22
VBP1-201ENST00000286428 MBD3L3A6NE82 208 aaPredicted RBP16.42■□□□□ 0.22
VBP1-201ENST00000286428 TMEM235A6NFC5 223 aa16.42■□□□□ 0.22
VBP1-201ENST00000286428 MBD3L5A6NJ08 208 aaPredicted RBP16.42■□□□□ 0.22
VBP1-201ENST00000286428 NDUFB6O95139 128 aa16.42■□□□□ 0.22
VBP1-201ENST00000286428 MGMTP16455 207 aa16.42■□□□□ 0.22
VBP1-201ENST00000286428 IGHV1-2P23083 117 aa16.42■□□□□ 0.22
VBP1-201ENST00000286428 KIR2DL2P43627 348 aaPredicted RBP16.42■□□□□ 0.22
VBP1-201ENST00000286428 GUCA2AQ02747 115 aa16.42■□□□□ 0.22
VBP1-201ENST00000286428 TNK1Q13470 666 aa16.42■□□□□ 0.22
VBP1-201ENST00000286428 METTL11BQ5VVY1 283 aa16.42■□□□□ 0.22
VBP1-201ENST00000286428 PLCXD3Q63HM9 321 aa16.42■□□□□ 0.22
VBP1-201ENST00000286428 C9orf106Q8NAJ2 232 aa16.42■□□□□ 0.22
VBP1-201ENST00000286428 SLC30A7Q8NEW0 376 aa16.42■□□□□ 0.22
VBP1-201ENST00000286428 PXT1Q8NFP0 134 aa16.42■□□□□ 0.22
VBP1-201ENST00000286428 MBD3L2Q8NHZ7 208 aaPredicted RBP16.42■□□□□ 0.22
VBP1-201ENST00000286428 HIST1H2AAQ96QV6 131 aa16.42■□□□□ 0.22
VBP1-201ENST00000286428 MED28Q9H204 178 aa16.42■□□□□ 0.22
VBP1-201ENST00000286428 GPN1Q9HCN4 374 aaPredicted RBP16.42■□□□□ 0.22
VBP1-201ENST00000286428 OBP2BQ9NPH6 170 aa16.42■□□□□ 0.22
VBP1-201ENST00000286428 IFT46Q9NQC8 304 aa16.42■□□□□ 0.22
VBP1-201ENST00000286428 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.42■□□□□ 0.22
VBP1-201ENST00000286428 DKK4Q9UBT3 224 aa16.42■□□□□ 0.22
VBP1-201ENST00000286428 PROCRQ9UNN8 238 aa16.42■□□□□ 0.22
VBP1-201ENST00000286428 MUC6Q6W4X9 2439 aa16.41■□□□□ 0.22
VBP1-201ENST00000286428 K7ENP7 123 aa16.41■□□□□ 0.22
VBP1-201ENST00000286428 RAB3DO95716 219 aa16.41■□□□□ 0.22
VBP1-201ENST00000286428 CST4P01036 141 aa16.41■□□□□ 0.22
VBP1-201ENST00000286428 HIST1H1DP16402 221 aaKnown RBP16.41■□□□□ 0.22
VBP1-201ENST00000286428 CD300CQ08708 224 aa16.41■□□□□ 0.22
VBP1-201ENST00000286428 GK2Q14410 553 aaPredicted RBP16.41■□□□□ 0.22
VBP1-201ENST00000286428 ZMYND11Q15326 602 aa16.41■□□□□ 0.22
VBP1-201ENST00000286428 RSU1Q15404 277 aa16.41■□□□□ 0.22
VBP1-201ENST00000286428 TRAPPC6BQ86SZ2 158 aa16.41■□□□□ 0.22
VBP1-201ENST00000286428 MDP1Q86V88 176 aa16.41■□□□□ 0.22
VBP1-201ENST00000286428 FJX1Q86VR8 437 aa16.41■□□□□ 0.22
VBP1-201ENST00000286428 C17orf78Q8N4C9 275 aa16.41■□□□□ 0.22
VBP1-201ENST00000286428 TMEM104Q8NE00 496 aa16.41■□□□□ 0.22
VBP1-201ENST00000286428 OR4C16Q8NGL9 310 aa16.41■□□□□ 0.22
VBP1-201ENST00000286428 SLC25A21Q9BQT8 299 aaPredicted RBP16.41■□□□□ 0.22
VBP1-201ENST00000286428 ZMAT3Q9HA38 289 aaKnown RBP16.41■□□□□ 0.22
VBP1-201ENST00000286428 PLEKHA6Q9Y2H5 1048 aa16.41■□□□□ 0.22
VBP1-201ENST00000286428 ZNF407Q9C0G0 2248 aa16.41■□□□□ 0.22
VBP1-201ENST00000286428 A0A0A6YYJ9 748 aa16.4■□□□□ 0.22
VBP1-201ENST00000286428 DISC1C4P0D8 188 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms