RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 TMEM123Q8N131 208 aa3.67□□□□□ -1.82
SCN3A-201ENST00000283254 DTWD2Q8NBA8 298 aa3.67□□□□□ -1.82
SCN3A-201ENST00000283254 LILRB1Q8NHL6 650 aaPredicted RBP3.67□□□□□ -1.82
SCN3A-201ENST00000283254 NUBPLQ8TB37 319 aa3.67□□□□□ -1.82
SCN3A-201ENST00000283254 LINC00615Q96LM1 132 aaPredicted RBP3.67□□□□□ -1.82
SCN3A-201ENST00000283254 NPAS1Q99742 590 aa3.67□□□□□ -1.82
SCN3A-201ENST00000283254 LRRC61Q9BV99 259 aa3.67□□□□□ -1.82
SCN3A-201ENST00000283254 MS4A5Q9H3V2 200 aa3.67□□□□□ -1.82
SCN3A-201ENST00000283254 FBXL2Q9UKC9 423 aa3.67□□□□□ -1.82
SCN3A-201ENST00000283254 V9GYS6 101 aa3.67□□□□□ -1.82
SCN3A-201ENST00000283254 A0A1B0GUH1 482 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 OR2T8A6NH00 312 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 SNRPGP15A8MWD9 76 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 PRSS44E7EML9 344 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 SCGB1C2P0DMR2 95 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 HIST1H1EP10412 219 aaKnown RBP3.66□□□□□ -1.82
SCN3A-201ENST00000283254 MMP11P24347 488 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 SLC35B1P78383 322 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 CDK5Q00535 292 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 ASTLQ6HA08 431 aaPredicted RBP3.66□□□□□ -1.82
SCN3A-201ENST00000283254 LAX1Q8IWV1 398 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 OR4S1Q8NGB4 309 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 OR1L4Q8NGR5 311 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 SMIM4Q8WVI0 70 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 TMEM18Q96B42 140 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 MED30Q96HR3 178 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 SF3B5Q9BWJ5 86 aaKnown RBP3.66□□□□□ -1.82
SCN3A-201ENST00000283254 GABARAPL3Q9BY60 117 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 UQCC1Q9NVA1 299 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 LOC102723971A0A1B0GUV8 181 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 FAM90A27PA6NNH2 459 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 IFNL4K9M1U5 179 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 TCAPO15273 167 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 CD37P11049 281 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 RPL35P42766 123 aaKnown RBP3.66□□□□□ -1.82
SCN3A-201ENST00000283254 AMIGO3Q86WK7 504 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 FBXL6Q8N531 539 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 NT5CQ8TCD5 201 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 ZNF707Q96C28 371 aaPredicted RBP3.66□□□□□ -1.82
SCN3A-201ENST00000283254 NTNG2Q96CW9 530 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 C1QTNF6Q9BXI9 259 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 SAP30LQ9HAJ7 183 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 TMED3Q9Y3Q3 217 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 SSC5DA1L4H1 1573 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 EVPLQ92817 2033 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 MYH4Q9Y623 1939 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 HIVEP2P31629 2446 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 FABP7O15540 132 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 GNG4P50150 75 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 GFERP55789 205 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 SUMO1P63165 101 aaKnown RBP3.66□□□□□ -1.82
SCN3A-201ENST00000283254 TNFAIP6P98066 277 aaPredicted RBP3.66□□□□□ -1.82
SCN3A-201ENST00000283254 SKP2Q13309 424 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 KIAA0141Q14154 515 aaPredicted RBP3.66□□□□□ -1.82
SCN3A-201ENST00000283254 SURF2Q15527 256 aaPredicted RBP3.66□□□□□ -1.82
SCN3A-201ENST00000283254 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 DYNLRB2Q8TF09 96 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 EXTL1Q92935 676 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 SLC26A1Q9H2B4 701 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 TRBV5-4A0A0C4DH59 114 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 A0A1W2PR48 441 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 OR2A25A4D2G3 310 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 M0R1X1 148 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 SEMA7AO75326 666 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 DHRS3O75911 302 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 EPXP11678 715 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 SLC25A6P12236 298 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 KIR3DL2P43630 455 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 ETV1P50549 477 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 TMEM128Q5BJH2 165 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 SLC24A4Q8NFF2 622 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 OR2Z1Q8NG97 314 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 OR13C5Q8NGS8 318 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 SYT11Q9BT88 431 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 WSB2Q9NYS7 404 aaPredicted RBP3.66□□□□□ -1.82
SCN3A-201ENST00000283254 A0A087WUJ7 227 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 POM121BA6NF01 834 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 TMEM202A6NGA9 273 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 TUBAL3A6NHL2 446 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 SLC2A10O95528 541 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 RBP4P02753 201 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 SP1P08047 785 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 PRF1P14222 555 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 ARNTP27540 789 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 TSPAN7P41732 249 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 SLC25A1P53007 311 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 PPP1CBP62140 327 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 TUSC1Q2TAM9 212 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 ZNF705AQ6ZN79 300 aaPredicted RBP3.66□□□□□ -1.82
SCN3A-201ENST00000283254 Q6ZSR9 355 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 C1orf210Q8IVY1 113 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 ADPRHL1Q8NDY3 354 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 OR1L6Q8NGR2 347 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 LILRB4Q8NHJ6 448 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 PERPQ96FX8 193 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 SEC11CQ9BY50 192 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 SIRT3Q9NTG7 399 aaPredicted RBP3.66□□□□□ -1.82
SCN3A-201ENST00000283254 PSENENQ9NZ42 101 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 CYB5R1Q9UHQ9 305 aa3.66□□□□□ -1.82
SCN3A-201ENST00000283254 POMT1Q9Y6A1 747 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms