RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 DUSP1P28562 367 aa11.46□□□□□ -0.57
ACER3-201ENST00000278544 MMP15P51511 669 aa11.46□□□□□ -0.57
ACER3-201ENST00000278544 PPP1CBP62140 327 aa11.46□□□□□ -0.57
ACER3-201ENST00000278544 KISS1Q15726 138 aa11.46□□□□□ -0.57
ACER3-201ENST00000278544 MOGAT2Q3SYC2 334 aa11.46□□□□□ -0.57
ACER3-201ENST00000278544 STEAP3Q658P3 488 aa11.46□□□□□ -0.57
ACER3-201ENST00000278544 ZCCHC24Q8N2G6 241 aaKnown RBP11.46□□□□□ -0.57
ACER3-201ENST00000278544 POC5Q8NA72 575 aa11.46□□□□□ -0.57
ACER3-201ENST00000278544 HAVCR2Q8TDQ0 301 aa11.46□□□□□ -0.57
ACER3-201ENST00000278544 SLC25A38Q96DW6 304 aa11.46□□□□□ -0.57
ACER3-201ENST00000278544 ZNF488Q96MN9 340 aa11.46□□□□□ -0.57
ACER3-201ENST00000278544 SYT3Q9BQG1 590 aa11.46□□□□□ -0.57
ACER3-201ENST00000278544 NICN1Q9BSH3 213 aa11.46□□□□□ -0.57
ACER3-201ENST00000278544 WACQ9BTA9 647 aa11.46□□□□□ -0.57
ACER3-201ENST00000278544 RHBDL2Q9NX52 303 aa11.46□□□□□ -0.57
ACER3-201ENST00000278544 CRTAPO75718 401 aaPredicted RBP11.46□□□□□ -0.58
ACER3-201ENST00000278544 CD1AP06126 327 aa11.46□□□□□ -0.58
ACER3-201ENST00000278544 CDK2P24941 298 aa11.46□□□□□ -0.58
ACER3-201ENST00000278544 EVX1P49640 407 aa11.46□□□□□ -0.58
ACER3-201ENST00000278544 P2RY6Q15077 328 aa11.46□□□□□ -0.58
ACER3-201ENST00000278544 ZNF57Q68EA5 555 aaPredicted RBP11.46□□□□□ -0.58
ACER3-201ENST00000278544 ADAM5Q6NVV9 412 aa11.46□□□□□ -0.58
ACER3-201ENST00000278544 Q8N402 240 aa11.46□□□□□ -0.58
ACER3-201ENST00000278544 CA5BP1Q8WTZ4 195 aa11.46□□□□□ -0.58
ACER3-201ENST00000278544 BORCS5Q969J3 196 aa11.46□□□□□ -0.58
ACER3-201ENST00000278544 ZNF75AQ96N20 296 aa11.46□□□□□ -0.58
ACER3-201ENST00000278544 SDHCQ99643 169 aaPredicted RBP11.46□□□□□ -0.58
ACER3-201ENST00000278544 C1QTNF5Q9BXJ0 243 aa11.46□□□□□ -0.58
ACER3-201ENST00000278544 POU2F3Q9UKI9 436 aa11.46□□□□□ -0.58
ACER3-201ENST00000278544 TRAV18A0A075B6X5 111 aa11.46□□□□□ -0.58
ACER3-201ENST00000278544 hCG_38984A0A1B0GV85 526 aa11.46□□□□□ -0.58
ACER3-201ENST00000278544 CD300LBA8K4G0 201 aa11.46□□□□□ -0.58
ACER3-201ENST00000278544 MSTNO14793 375 aa11.46□□□□□ -0.58
ACER3-201ENST00000278544 IGFBP3P17936 291 aaPredicted RBP11.46□□□□□ -0.58
ACER3-201ENST00000278544 DDOSTP39656 456 aa11.46□□□□□ -0.58
ACER3-201ENST00000278544 UCP2P55851 309 aa11.46□□□□□ -0.58
ACER3-201ENST00000278544 GUCA2AQ02747 115 aa11.46□□□□□ -0.58
ACER3-201ENST00000278544 GLCCI1Q86VQ1 547 aa11.46□□□□□ -0.58
ACER3-201ENST00000278544 GTF3AQ92664 365 aaKnown RBP11.46□□□□□ -0.58
ACER3-201ENST00000278544 PHF21AQ96BD5 680 aa11.46□□□□□ -0.58
ACER3-201ENST00000278544 UFSP2Q9NUQ7 469 aa11.46□□□□□ -0.58
ACER3-201ENST00000278544 MRPS28Q9Y2Q9 187 aaKnown RBP11.46□□□□□ -0.58
ACER3-201ENST00000278544 IGKV1-27A0A075B6S5 117 aa11.45□□□□□ -0.58
ACER3-201ENST00000278544 A0A0U1RQV5 110 aa11.45□□□□□ -0.58
ACER3-201ENST00000278544 TMEM272A0A1B0GTI8 110 aa11.45□□□□□ -0.58
ACER3-201ENST00000278544 H0YL77 283 aa11.45□□□□□ -0.58
ACER3-201ENST00000278544 SNTB2Q13425 540 aaKnown RBP11.45□□□□□ -0.58
ACER3-201ENST00000278544 S100ZQ8WXG8 99 aa11.45□□□□□ -0.58
ACER3-201ENST00000278544 BORCS8Q96FH0 119 aa11.45□□□□□ -0.58
ACER3-201ENST00000278544 WDR12Q9GZL7 423 aaKnown RBP11.45□□□□□ -0.58
ACER3-201ENST00000278544 ZNF835Q9Y2P0 537 aa11.45□□□□□ -0.58
ACER3-201ENST00000278544 A0A1W2PQ09 198 aa11.45□□□□□ -0.58
ACER3-201ENST00000278544 MEX3AA1L020 520 aaKnown RBP11.45□□□□□ -0.58
ACER3-201ENST00000278544 C16orf97H3BN30 126 aa11.45□□□□□ -0.58
ACER3-201ENST00000278544 HSPB6O14558 160 aa11.45□□□□□ -0.58
ACER3-201ENST00000278544 VEGFCP49767 419 aa11.45□□□□□ -0.58
ACER3-201ENST00000278544 DGCR2P98153 550 aa11.45□□□□□ -0.58
ACER3-201ENST00000278544 SCN1BQ07699 218 aa11.45□□□□□ -0.58
ACER3-201ENST00000278544 FAAP20Q6NZ36 180 aa11.45□□□□□ -0.58
ACER3-201ENST00000278544 S100A13Q99584 98 aa11.45□□□□□ -0.58
ACER3-201ENST00000278544 SLC25A15Q9Y619 301 aa11.45□□□□□ -0.58
ACER3-201ENST00000278544 SLC17A2O00624 439 aa11.44□□□□□ -0.58
ACER3-201ENST00000278544 SMPD2O60906 423 aa11.44□□□□□ -0.58
ACER3-201ENST00000278544 GRPP07492 148 aa11.44□□□□□ -0.58
ACER3-201ENST00000278544 INPP1P49441 399 aa11.44□□□□□ -0.58
ACER3-201ENST00000278544 PPP5CP53041 499 aa11.44□□□□□ -0.58
ACER3-201ENST00000278544 PRDX4Q13162 271 aa11.44□□□□□ -0.58
ACER3-201ENST00000278544 TMEM255AQ5JRV8 349 aa11.44□□□□□ -0.58
ACER3-201ENST00000278544 SLC22A25Q6T423 547 aa11.44□□□□□ -0.58
ACER3-201ENST00000278544 CALHM1Q8IU99 346 aa11.44□□□□□ -0.58
ACER3-201ENST00000278544 SVEP1Q4LDE5 3571 aa11.44□□□□□ -0.58
ACER3-201ENST00000278544 ERVH48-1M5A8F1 160 aa11.44□□□□□ -0.58
ACER3-201ENST00000278544 HTR3BO95264 441 aa11.44□□□□□ -0.58
ACER3-201ENST00000278544 CA7P43166 264 aa11.44□□□□□ -0.58
ACER3-201ENST00000278544 HAAOP46952 286 aa11.44□□□□□ -0.58
ACER3-201ENST00000278544 TMEM69Q5SWH9 247 aa11.44□□□□□ -0.58
ACER3-201ENST00000278544 WFIKKN1Q96NZ8 548 aa11.44□□□□□ -0.58
ACER3-201ENST00000278544 COQ3Q9NZJ6 369 aa11.44□□□□□ -0.58
ACER3-201ENST00000278544 SPATA2Q9UM82 520 aa11.44□□□□□ -0.58
ACER3-201ENST00000278544 IGHV2OR16-5A0A0B4J2B6 119 aa11.44□□□□□ -0.58
ACER3-201ENST00000278544 MEIOCA2RUB1 952 aa11.44□□□□□ -0.58
ACER3-201ENST00000278544 CBR1P16152 277 aa11.44□□□□□ -0.58
ACER3-201ENST00000278544 GABRR1P24046 479 aa11.44□□□□□ -0.58
ACER3-201ENST00000278544 ART1P52961 327 aa11.44□□□□□ -0.58
ACER3-201ENST00000278544 PSG7Q13046 419 aa11.44□□□□□ -0.58
ACER3-201ENST00000278544 MSMPQ1L6U9 139 aa11.44□□□□□ -0.58
ACER3-201ENST00000278544 OLFML2AQ68BL7 652 aa11.44□□□□□ -0.58
ACER3-201ENST00000278544 NEUROG1Q92886 237 aa11.44□□□□□ -0.58
ACER3-201ENST00000278544 VKORC1Q9BQB6 163 aa11.44□□□□□ -0.58
ACER3-201ENST00000278544 OBP2BQ9NPH6 170 aa11.44□□□□□ -0.58
ACER3-201ENST00000278544 FOXJ3Q9UPW0 622 aa11.44□□□□□ -0.58
ACER3-201ENST00000278544 ABCD4O14678 606 aa11.43□□□□□ -0.58
ACER3-201ENST00000278544 ZNF205O95201 554 aa11.43□□□□□ -0.58
ACER3-201ENST00000278544 RAB25P57735 213 aa11.43□□□□□ -0.58
ACER3-201ENST00000278544 NRN1LQ496H8 165 aa11.43□□□□□ -0.58
ACER3-201ENST00000278544 NKAPLQ5M9Q1 402 aa11.43□□□□□ -0.58
ACER3-201ENST00000278544 KLF14Q8TD94 323 aaPredicted RBP11.43□□□□□ -0.58
ACER3-201ENST00000278544 PHYHIPQ92561 330 aa11.43□□□□□ -0.58
ACER3-201ENST00000278544 AKAP1Q92667 903 aaKnown RBP eCLIP11.43□□□□□ -0.58
ACER3-201ENST00000278544 WBP1Q96G27 269 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms