RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 SEC22AQ96IW7 307 aa11.39□□□□□ -0.59
C9orf3-201ENST00000277198 OXGR1Q96P68 337 aa11.39□□□□□ -0.59
C9orf3-201ENST00000277198 TAAR9Q96RI9 348 aa11.39□□□□□ -0.59
C9orf3-201ENST00000277198 OCSTAMPQ9BR26 566 aa11.39□□□□□ -0.59
C9orf3-201ENST00000277198 EMC6Q9BV81 110 aa11.39□□□□□ -0.59
C9orf3-201ENST00000277198 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.39□□□□□ -0.59
C9orf3-201ENST00000277198 PRELID1Q9Y255 219 aa11.39□□□□□ -0.59
C9orf3-201ENST00000277198 SSUH2Q9Y2M2 353 aa11.39□□□□□ -0.59
C9orf3-201ENST00000277198 MRPS28Q9Y2Q9 187 aaKnown RBP11.39□□□□□ -0.59
C9orf3-201ENST00000277198 TEX13DA0A0J9YY54 714 aaPredicted RBP11.38□□□□□ -0.59
C9orf3-201ENST00000277198 TRBV11-1A0A0K0K1C0 115 aa11.38□□□□□ -0.59
C9orf3-201ENST00000277198 C2orf72A6NCS6 295 aa11.38□□□□□ -0.59
C9orf3-201ENST00000277198 B4E171 279 aa11.38□□□□□ -0.59
C9orf3-201ENST00000277198 H3BML4 177 aa11.38□□□□□ -0.59
C9orf3-201ENST00000277198 EFNA2O43921 213 aa11.38□□□□□ -0.59
C9orf3-201ENST00000277198 ZFAND5O76080 213 aa11.38□□□□□ -0.59
C9orf3-201ENST00000277198 TIAF1O95411 115 aa11.38□□□□□ -0.59
C9orf3-201ENST00000277198 VAMP1P23763 118 aa11.38□□□□□ -0.59
C9orf3-201ENST00000277198 EIF1P41567 113 aaKnown RBP11.38□□□□□ -0.59
C9orf3-201ENST00000277198 TSPAN7P41732 249 aa11.38□□□□□ -0.59
C9orf3-201ENST00000277198 GRB2P62993 217 aaKnown RBP11.38□□□□□ -0.59
C9orf3-201ENST00000277198 ARL6IP1Q15041 203 aa11.38□□□□□ -0.59
C9orf3-201ENST00000277198 GLIPR1L1Q6UWM5 242 aa11.38□□□□□ -0.59
C9orf3-201ENST00000277198 C16orf47Q6ZP98 133 aaPredicted RBP11.38□□□□□ -0.59
C9orf3-201ENST00000277198 CFAP77Q6ZQR2 320 aa11.38□□□□□ -0.59
C9orf3-201ENST00000277198 DTX1Q86Y01 620 aa11.38□□□□□ -0.59
C9orf3-201ENST00000277198 OR5AS1Q8N127 324 aa11.38□□□□□ -0.59
C9orf3-201ENST00000277198 C1orf147Q96MC9 270 aaPredicted RBP11.38□□□□□ -0.59
C9orf3-201ENST00000277198 URM1Q9BTM9 101 aaKnown RBP11.38□□□□□ -0.59
C9orf3-201ENST00000277198 CHMP1AQ9HD42 196 aaPredicted RBP11.38□□□□□ -0.59
C9orf3-201ENST00000277198 RAB18Q9NP72 206 aa11.38□□□□□ -0.59
C9orf3-201ENST00000277198 GPR132Q9UNW8 380 aa11.38□□□□□ -0.59
C9orf3-201ENST00000277198 POLR1DQ9Y2S0 133 aa11.38□□□□□ -0.59
C9orf3-201ENST00000277198 HDGFL3Q9Y3E1 203 aa11.38□□□□□ -0.59
C9orf3-201ENST00000277198 WIF1Q9Y5W5 379 aa11.38□□□□□ -0.59
C9orf3-201ENST00000277198 PIEZO2Q9H5I5 2752 aa11.38□□□□□ -0.59
C9orf3-201ENST00000277198 FREM3P0C091 2139 aa11.38□□□□□ -0.59
C9orf3-201ENST00000277198 F5H0A9 414 aaPredicted RBP11.37□□□□□ -0.59
C9orf3-201ENST00000277198 CCSO14618 274 aa11.37□□□□□ -0.59
C9orf3-201ENST00000277198 TOR1AO14656 332 aa11.37□□□□□ -0.59
C9orf3-201ENST00000277198 TRAF3IP2O43734 574 aaPredicted RBP11.37□□□□□ -0.59
C9orf3-201ENST00000277198 ALDH3B1P43353 468 aa11.37□□□□□ -0.59
C9orf3-201ENST00000277198 PPIAP62937 165 aaKnown RBP11.37□□□□□ -0.59
C9orf3-201ENST00000277198 MC2RQ01718 297 aa11.37□□□□□ -0.59
C9orf3-201ENST00000277198 LRRC37A5PQ49AS3 106 aa11.37□□□□□ -0.59
C9orf3-201ENST00000277198 SHISA6Q6ZSJ9 500 aa11.37□□□□□ -0.59
C9orf3-201ENST00000277198 TIPARPQ7Z3E1 657 aaKnown RBP11.37□□□□□ -0.59
C9orf3-201ENST00000277198 OR4K17Q8NGC6 315 aa11.37□□□□□ -0.59
C9orf3-201ENST00000277198 OR5T2Q8NGG2 359 aa11.37□□□□□ -0.59
C9orf3-201ENST00000277198 POC1BQ8TC44 478 aa11.37□□□□□ -0.59
C9orf3-201ENST00000277198 SLC22A8Q8TCC7 542 aa11.37□□□□□ -0.59
C9orf3-201ENST00000277198 SSC4DQ8WTU2 575 aa11.37□□□□□ -0.59
C9orf3-201ENST00000277198 MARC2Q969Z3 335 aa11.37□□□□□ -0.59
C9orf3-201ENST00000277198 OR6C1Q96RD1 312 aa11.37□□□□□ -0.59
C9orf3-201ENST00000277198 WDR77Q9BQA1 342 aaPredicted RBP11.37□□□□□ -0.59
C9orf3-201ENST00000277198 TMEM59Q9BXS4 323 aa11.37□□□□□ -0.59
C9orf3-201ENST00000277198 MYOTQ9UBF9 498 aa11.37□□□□□ -0.59
C9orf3-201ENST00000277198 SEC16AO15027 2179 aa11.37□□□□□ -0.59
C9orf3-201ENST00000277198 FGF16O43320 207 aa11.37□□□□□ -0.59
C9orf3-201ENST00000277198 CDC14BO60729 498 aa11.37□□□□□ -0.59
C9orf3-201ENST00000277198 APOC3P02656 99 aa11.37□□□□□ -0.59
C9orf3-201ENST00000277198 LIPCP11150 499 aa11.37□□□□□ -0.59
C9orf3-201ENST00000277198 TPT1P13693 172 aaKnown RBP11.37□□□□□ -0.59
C9orf3-201ENST00000277198 AKR1C4P17516 323 aa11.37□□□□□ -0.59
C9orf3-201ENST00000277198 PTGDSP41222 190 aa11.37□□□□□ -0.59
C9orf3-201ENST00000277198 DCDP81605 110 aaKnown RBP11.37□□□□□ -0.59
C9orf3-201ENST00000277198 ABHD12BQ7Z5M8 362 aaPredicted RBP11.37□□□□□ -0.59
C9orf3-201ENST00000277198 PEG10Q86TG7 708 aaKnown RBP11.37□□□□□ -0.59
C9orf3-201ENST00000277198 FAM89BQ8N5H3 189 aa11.37□□□□□ -0.59
C9orf3-201ENST00000277198 CCDC54Q8NEL0 328 aa11.37□□□□□ -0.59
C9orf3-201ENST00000277198 SLC30A7Q8NEW0 376 aa11.37□□□□□ -0.59
C9orf3-201ENST00000277198 OR5AP2Q8NGF4 316 aa11.37□□□□□ -0.59
C9orf3-201ENST00000277198 PIK3IP1Q96FE7 263 aa11.37□□□□□ -0.59
C9orf3-201ENST00000277198 DDA1Q9BW61 102 aa11.37□□□□□ -0.59
C9orf3-201ENST00000277198 SLC6A15Q9H2J7 730 aa11.37□□□□□ -0.59
C9orf3-201ENST00000277198 METTL7AQ9H8H3 244 aa11.37□□□□□ -0.59
C9orf3-201ENST00000277198 SEC61A2Q9H9S3 476 aa11.37□□□□□ -0.59
C9orf3-201ENST00000277198 MBD2Q9UBB5 411 aa11.37□□□□□ -0.59
C9orf3-201ENST00000277198 C19orf25Q9UFG5 118 aaPredicted RBP11.37□□□□□ -0.59
C9orf3-201ENST00000277198 FAM25EA8MYX2 175 aa11.36□□□□□ -0.59
C9orf3-201ENST00000277198 SFT2D2O95562 160 aa11.36□□□□□ -0.59
C9orf3-201ENST00000277198 LYL1P12980 280 aa11.36□□□□□ -0.59
C9orf3-201ENST00000277198 FPR2P25090 351 aa11.36□□□□□ -0.59
C9orf3-201ENST00000277198 ZNF121P58317 390 aaPredicted RBP11.36□□□□□ -0.59
C9orf3-201ENST00000277198 LSM6P62312 80 aaKnown RBP11.36□□□□□ -0.59
C9orf3-201ENST00000277198 PPA1Q15181 289 aa11.36□□□□□ -0.59
C9orf3-201ENST00000277198 HYAL4Q2M3T9 481 aa11.36□□□□□ -0.59
C9orf3-201ENST00000277198 SLC22A6Q4U2R8 563 aa11.36□□□□□ -0.59
C9orf3-201ENST00000277198 DCAF12Q5T6F0 453 aa11.36□□□□□ -0.59
C9orf3-201ENST00000277198 RTL6Q6ICC9 239 aa11.36□□□□□ -0.59
C9orf3-201ENST00000277198 PCSK4Q6UW60 755 aa11.36□□□□□ -0.59
C9orf3-201ENST00000277198 CPEB2Q7Z5Q1 589 aaKnown RBP11.36□□□□□ -0.59
C9orf3-201ENST00000277198 PNLDC1Q8NA58 520 aaKnown RBP11.36□□□□□ -0.59
C9orf3-201ENST00000277198 ADAD2Q8NCV1 583 aaKnown RBP11.36□□□□□ -0.59
C9orf3-201ENST00000277198 OR8B12Q8NGG6 310 aa11.36□□□□□ -0.59
C9orf3-201ENST00000277198 OR52H1Q8NGJ2 320 aa11.36□□□□□ -0.59
C9orf3-201ENST00000277198 THAP3Q8WTV1 239 aaPredicted RBP11.36□□□□□ -0.59
C9orf3-201ENST00000277198 CASTOR1Q8WTX7 329 aa11.36□□□□□ -0.59
C9orf3-201ENST00000277198 TMEM41AQ96HV5 264 aa11.36□□□□□ -0.59
C9orf3-201ENST00000277198 ZNF75AQ96N20 296 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms