RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 FAM206AQ9NX38 181 aa11.42□□□□□ -0.58
COL8A1-202ENST00000273342 PTPRSQ13332 1948 aa11.42□□□□□ -0.58
COL8A1-202ENST00000273342 NUDT19A8MXV4 375 aa11.41□□□□□ -0.58
COL8A1-202ENST00000273342 MS4A18H0YCH9 400 aa11.41□□□□□ -0.58
COL8A1-202ENST00000273342 GIMD1P0DJR0 217 aa11.41□□□□□ -0.58
COL8A1-202ENST00000273342 BLVRBP30043 206 aaPredicted RBP11.41□□□□□ -0.58
COL8A1-202ENST00000273342 PTGER4P35408 488 aa11.41□□□□□ -0.58
COL8A1-202ENST00000273342 RBMXP38159 391 aaKnown RBP11.41□□□□□ -0.58
COL8A1-202ENST00000273342 RPS10P46783 165 aaKnown RBP11.41□□□□□ -0.58
COL8A1-202ENST00000273342 CAMLGP49069 296 aa11.41□□□□□ -0.58
COL8A1-202ENST00000273342 EFNA3P52797 238 aa11.41□□□□□ -0.58
COL8A1-202ENST00000273342 HSD17B7P56937 341 aa11.41□□□□□ -0.58
COL8A1-202ENST00000273342 FOXK1P85037 733 aa11.41□□□□□ -0.58
COL8A1-202ENST00000273342 TLE3Q04726 772 aa11.41□□□□□ -0.58
COL8A1-202ENST00000273342 DLX2Q07687 328 aaPredicted RBP11.41□□□□□ -0.58
COL8A1-202ENST00000273342 NSDHLQ15738 373 aa11.41□□□□□ -0.58
COL8A1-202ENST00000273342 MS4A18Q3C1V0 323 aa11.41□□□□□ -0.58
COL8A1-202ENST00000273342 C9orf40Q8IXQ3 194 aa11.41□□□□□ -0.58
COL8A1-202ENST00000273342 OR10S1Q8NGN2 331 aa11.41□□□□□ -0.58
COL8A1-202ENST00000273342 PFDN5Q99471 154 aa11.41□□□□□ -0.58
COL8A1-202ENST00000273342 IGHV5-51A0A0C4DH38 117 aa11.41□□□□□ -0.58
COL8A1-202ENST00000273342 ZNF727A8MUV8 499 aa11.41□□□□□ -0.58
COL8A1-202ENST00000273342 TMEM14DPA8MWL7 114 aa11.41□□□□□ -0.58
COL8A1-202ENST00000273342 ISG15P05161 165 aa11.41□□□□□ -0.58
COL8A1-202ENST00000273342 GLP1RP43220 463 aa11.41□□□□□ -0.58
COL8A1-202ENST00000273342 HAAOP46952 286 aa11.41□□□□□ -0.58
COL8A1-202ENST00000273342 SULT1A1P50225 295 aa11.41□□□□□ -0.58
COL8A1-202ENST00000273342 IGLV3-21P80748 117 aaPredicted RBP11.41□□□□□ -0.58
COL8A1-202ENST00000273342 CHRFAM7AQ494W8 412 aa11.41□□□□□ -0.58
COL8A1-202ENST00000273342 OR51M1Q9H341 326 aa11.41□□□□□ -0.58
COL8A1-202ENST00000273342 CCDC163A0A0D9SF12 145 aa11.41□□□□□ -0.58
COL8A1-202ENST00000273342 TMEM150CB9EJG8 249 aa11.41□□□□□ -0.58
COL8A1-202ENST00000273342 FAM157AC9JC47 383 aa11.41□□□□□ -0.58
COL8A1-202ENST00000273342 RER1O15258 196 aa11.41□□□□□ -0.58
COL8A1-202ENST00000273342 CST4P01036 141 aa11.41□□□□□ -0.58
COL8A1-202ENST00000273342 AGAP20933 346 aa11.41□□□□□ -0.58
COL8A1-202ENST00000273342 SLC6A9P48067 706 aa11.41□□□□□ -0.58
COL8A1-202ENST00000273342 POLR2HP52434 150 aaKnown RBP11.41□□□□□ -0.58
COL8A1-202ENST00000273342 FBXW4P57775 412 aa11.41□□□□□ -0.58
COL8A1-202ENST00000273342 BRICD5Q6PL45 260 aa11.41□□□□□ -0.58
COL8A1-202ENST00000273342 TMEM92Q6UXU6 159 aa11.41□□□□□ -0.58
COL8A1-202ENST00000273342 FAM57BQ71RH2 274 aa11.41□□□□□ -0.58
COL8A1-202ENST00000273342 SLAMF9Q96A28 289 aa11.41□□□□□ -0.58
COL8A1-202ENST00000273342 PTX4Q96A99 478 aa11.41□□□□□ -0.58
COL8A1-202ENST00000273342 RNF122Q9H9V4 155 aa11.41□□□□□ -0.58
COL8A1-202ENST00000273342 TIMM10BQ9Y5J6 103 aa11.41□□□□□ -0.58
COL8A1-202ENST00000273342 KPTNQ9Y664 436 aa11.41□□□□□ -0.58
COL8A1-202ENST00000273342 GPR37O15354 613 aa11.4□□□□□ -0.58
COL8A1-202ENST00000273342 GABRR1P24046 479 aa11.4□□□□□ -0.58
COL8A1-202ENST00000273342 AKT2P31751 481 aa11.4□□□□□ -0.58
COL8A1-202ENST00000273342 SLC6A8P48029 635 aa11.4□□□□□ -0.58
COL8A1-202ENST00000273342 NUP54Q7Z3B4 507 aa11.4□□□□□ -0.58
COL8A1-202ENST00000273342 TCTEX1D2Q8WW35 142 aa11.4□□□□□ -0.58
COL8A1-202ENST00000273342 DAZLQ92904 295 aaKnown RBP11.4□□□□□ -0.58
COL8A1-202ENST00000273342 ADIPOR1Q96A54 375 aa11.4□□□□□ -0.58
COL8A1-202ENST00000273342 MRPL38Q96DV4 380 aaKnown RBP11.4□□□□□ -0.58
COL8A1-202ENST00000273342 RHOVQ96L33 236 aa11.4□□□□□ -0.58
COL8A1-202ENST00000273342 SLC46A1Q96NT5 459 aa11.4□□□□□ -0.58
COL8A1-202ENST00000273342 CCNL2Q96S94 520 aaPredicted RBP11.4□□□□□ -0.58
COL8A1-202ENST00000273342 RARRES2Q99969 163 aa11.4□□□□□ -0.58
COL8A1-202ENST00000273342 PAPOLGQ9BWT3 736 aaKnown RBP11.4□□□□□ -0.58
COL8A1-202ENST00000273342 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.4□□□□□ -0.58
COL8A1-202ENST00000273342 ASH2LQ9UBL3 628 aa11.4□□□□□ -0.58
COL8A1-202ENST00000273342 H7C1Q1 480 aa11.4□□□□□ -0.58
COL8A1-202ENST00000273342 MT-ATP6P00846 226 aa11.4□□□□□ -0.58
COL8A1-202ENST00000273342 PET100P0DJ07 73 aa11.4□□□□□ -0.58
COL8A1-202ENST00000273342 S100PP25815 95 aa11.4□□□□□ -0.58
COL8A1-202ENST00000273342 RRADP55042 308 aa11.4□□□□□ -0.58
COL8A1-202ENST00000273342 NDUFA6P56556 154 aa11.4□□□□□ -0.58
COL8A1-202ENST00000273342 FXYD4P59646 89 aa11.4□□□□□ -0.58
COL8A1-202ENST00000273342 C6orf201Q7Z4U5 140 aa11.4□□□□□ -0.58
COL8A1-202ENST00000273342 WDSUB1Q8N9V3 476 aa11.4□□□□□ -0.58
COL8A1-202ENST00000273342 FNDC9Q8TBE3 224 aa11.4□□□□□ -0.58
COL8A1-202ENST00000273342 ZNF2Q9BSG1 426 aaPredicted RBP11.4□□□□□ -0.58
COL8A1-202ENST00000273342 CFHR5Q9BXR6 569 aa11.4□□□□□ -0.58
COL8A1-202ENST00000273342 CNTNAP3Q9BZ76 1288 aa11.4□□□□□ -0.58
COL8A1-202ENST00000273342 ABCA7Q8IZY2 2146 aa11.4□□□□□ -0.59
COL8A1-202ENST00000273342 FAM221AA4D161 298 aa11.39□□□□□ -0.59
COL8A1-202ENST00000273342 EPOPA6NHQ4 379 aa11.39□□□□□ -0.59
COL8A1-202ENST00000273342 FPR2P25090 351 aa11.39□□□□□ -0.59
COL8A1-202ENST00000273342 EIF2S3P41091 472 aaKnown RBP11.39□□□□□ -0.59
COL8A1-202ENST00000273342 MMP16P51512 607 aa11.39□□□□□ -0.59
COL8A1-202ENST00000273342 HSF1Q00613 529 aa11.39□□□□□ -0.59
COL8A1-202ENST00000273342 CHAF1BQ13112 559 aa11.39□□□□□ -0.59
COL8A1-202ENST00000273342 LANCL3Q6ZV70 420 aa11.39□□□□□ -0.59
COL8A1-202ENST00000273342 RTL10Q7L3V2 364 aa11.39□□□□□ -0.59
COL8A1-202ENST00000273342 OR5AS1Q8N127 324 aa11.39□□□□□ -0.59
COL8A1-202ENST00000273342 ARRDC1Q8N5I2 433 aa11.39□□□□□ -0.59
COL8A1-202ENST00000273342 GPBAR1Q8TDU6 330 aa11.39□□□□□ -0.59
COL8A1-202ENST00000273342 RNF133Q8WVZ7 376 aa11.39□□□□□ -0.59
COL8A1-202ENST00000273342 SGK3Q96BR1 496 aa11.39□□□□□ -0.59
COL8A1-202ENST00000273342 C14orf166Q9Y224 244 aaKnown RBP11.39□□□□□ -0.59
COL8A1-202ENST00000273342 B3GALT5Q9Y2C3 310 aa11.39□□□□□ -0.59
COL8A1-202ENST00000273342 B3GALT1Q9Y5Z6 326 aa11.39□□□□□ -0.59
COL8A1-202ENST00000273342 PCDH15Q96QU1 1955 aa11.39□□□□□ -0.59
COL8A1-202ENST00000273342 TCRBV21S2A2A0A5A6 115 aa11.39□□□□□ -0.59
COL8A1-202ENST00000273342 FAM221BA6H8Z2 402 aa11.39□□□□□ -0.59
COL8A1-202ENST00000273342 DDAH2O95865 285 aa11.39□□□□□ -0.59
COL8A1-202ENST00000273342 IGHV2-70P01814 119 aa11.39□□□□□ -0.59
COL8A1-202ENST00000273342 GUSBP08236 651 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms