RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 MRPL28Q13084 256 aaKnown RBP10.77□□□□□ -0.69
SS18-202ENST00000269138 CDK5R1Q15078 307 aa10.77□□□□□ -0.69
SS18-202ENST00000269138 HFEQ30201 348 aa10.77□□□□□ -0.69
SS18-202ENST00000269138 CEP78Q5JTW2 689 aa10.77□□□□□ -0.69
SS18-202ENST00000269138 AVPI1Q5T686 147 aa10.77□□□□□ -0.69
SS18-202ENST00000269138 TMEM244Q5VVB8 128 aa10.77□□□□□ -0.69
SS18-202ENST00000269138 RNLSQ5VYX0 342 aa10.77□□□□□ -0.69
SS18-202ENST00000269138 RPL22L1Q6P5R6 122 aaKnown RBP10.77□□□□□ -0.69
SS18-202ENST00000269138 MOB3CQ70IA8 216 aa10.77□□□□□ -0.69
SS18-202ENST00000269138 RPS4Y2Q8TD47 263 aa10.77□□□□□ -0.69
SS18-202ENST00000269138 OR5P3Q8WZ94 311 aa10.77□□□□□ -0.69
SS18-202ENST00000269138 RGP1Q92546 391 aaPredicted RBP10.77□□□□□ -0.69
SS18-202ENST00000269138 OR5M11Q96RB7 305 aa10.77□□□□□ -0.69
SS18-202ENST00000269138 PIMREGQ9BSJ6 248 aa10.77□□□□□ -0.69
SS18-202ENST00000269138 TMUB1Q9BVT8 246 aa10.77□□□□□ -0.69
SS18-202ENST00000269138 GPR173Q9NS66 373 aa10.77□□□□□ -0.69
SS18-202ENST00000269138 TMEM106BQ9NUM4 274 aa10.77□□□□□ -0.69
SS18-202ENST00000269138 ENPP5Q9UJA9 477 aa10.77□□□□□ -0.69
SS18-202ENST00000269138 ERGIC3Q9Y282 383 aa10.77□□□□□ -0.69
SS18-202ENST00000269138 NOP16Q9Y3C1 178 aaKnown RBP10.77□□□□□ -0.69
SS18-202ENST00000269138 IGHV4-61A0A0C4DH41 118 aa10.76□□□□□ -0.69
SS18-202ENST00000269138 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.76□□□□□ -0.69
SS18-202ENST00000269138 NDUFS8O00217 210 aa10.76□□□□□ -0.69
SS18-202ENST00000269138 MYL12BO14950 172 aa10.76□□□□□ -0.69
SS18-202ENST00000269138 PTBP3O95758 552 aaKnown RBP10.76□□□□□ -0.69
SS18-202ENST00000269138 NRASP01111 189 aa10.76□□□□□ -0.69
SS18-202ENST00000269138 GATA4P43694 442 aa10.76□□□□□ -0.69
SS18-202ENST00000269138 MAP2K4P45985 399 aa10.76□□□□□ -0.69
SS18-202ENST00000269138 WNT4P56705 351 aa10.76□□□□□ -0.69
SS18-202ENST00000269138 TMEM33P57088 247 aa10.76□□□□□ -0.69
SS18-202ENST00000269138 HOXA4Q00056 320 aaPredicted RBP10.76□□□□□ -0.69
SS18-202ENST00000269138 SLC3A1Q07837 685 aa10.76□□□□□ -0.69
SS18-202ENST00000269138 CCDC58Q4VC31 144 aa10.76□□□□□ -0.69
SS18-202ENST00000269138 ZBTB37Q5TC79 503 aa10.76□□□□□ -0.69
SS18-202ENST00000269138 TMEM42Q69YG0 159 aa10.76□□□□□ -0.69
SS18-202ENST00000269138 ZNF826PQ6ZT77 177 aa10.76□□□□□ -0.69
SS18-202ENST00000269138 ZDHHC23Q8IYP9 409 aa10.76□□□□□ -0.69
SS18-202ENST00000269138 FTMTQ8N4E7 242 aa10.76□□□□□ -0.69
SS18-202ENST00000269138 CELF2-AS1Q8N7Q2 184 aa10.76□□□□□ -0.69
SS18-202ENST00000269138 SPERTQ8NA61 448 aa10.76□□□□□ -0.69
SS18-202ENST00000269138 OR5AK2Q8NH90 309 aa10.76□□□□□ -0.69
SS18-202ENST00000269138 ITFG2Q969R8 447 aa10.76□□□□□ -0.69
SS18-202ENST00000269138 FGGYQ96C11 551 aa10.76□□□□□ -0.69
SS18-202ENST00000269138 ADAT3Q96EY9 351 aaPredicted RBP10.76□□□□□ -0.69
SS18-202ENST00000269138 RNF170Q96K19 258 aa10.76□□□□□ -0.69
SS18-202ENST00000269138 MICU1Q9BPX6 476 aa10.76□□□□□ -0.69
SS18-202ENST00000269138 CCDC90BQ9GZT6 254 aa10.76□□□□□ -0.69
SS18-202ENST00000269138 HHLA2Q9UM44 414 aa10.76□□□□□ -0.69
SS18-202ENST00000269138 LSM2Q9Y333 95 aaKnown RBP10.76□□□□□ -0.69
SS18-202ENST00000269138 CELSR1Q9NYQ6 3014 aa10.76□□□□□ -0.69
SS18-202ENST00000269138 HIVEP1P15822 2718 aa10.75□□□□□ -0.69
SS18-202ENST00000269138 PNMA8CA0A1B0GUJ8 204 aa10.75□□□□□ -0.69
SS18-202ENST00000269138 TMEM212A6NML5 194 aa10.75□□□□□ -0.69
SS18-202ENST00000269138 ANXA2P2A6NMY6 339 aa10.75□□□□□ -0.69
SS18-202ENST00000269138 DHRS7CA6NNS2 312 aa10.75□□□□□ -0.69
SS18-202ENST00000269138 ZNF205O95201 554 aa10.75□□□□□ -0.69
SS18-202ENST00000269138 CYB5R3P00387 301 aaPredicted RBP10.75□□□□□ -0.69
SS18-202ENST00000269138 CD99P14209 185 aa10.75□□□□□ -0.69
SS18-202ENST00000269138 SLC25A16P16260 332 aa10.75□□□□□ -0.69
SS18-202ENST00000269138 EEF1B2P24534 225 aaKnown RBP10.75□□□□□ -0.69
SS18-202ENST00000269138 GPR6P46095 362 aaPredicted RBP10.75□□□□□ -0.69
SS18-202ENST00000269138 FAM201AQ5SY85 155 aa10.75□□□□□ -0.69
SS18-202ENST00000269138 CLVS2Q5SYC1 327 aa10.75□□□□□ -0.69
SS18-202ENST00000269138 PLCXD3Q63HM9 321 aa10.75□□□□□ -0.69
SS18-202ENST00000269138 DMKNQ6E0U4 476 aaPredicted RBP10.75□□□□□ -0.69
SS18-202ENST00000269138 PRSS48Q7RTY5 328 aa10.75□□□□□ -0.69
SS18-202ENST00000269138 C11orf53Q8IXP5 236 aa10.75□□□□□ -0.69
SS18-202ENST00000269138 OR1M1Q8NGA1 313 aa10.75□□□□□ -0.69
SS18-202ENST00000269138 HAVCR2Q8TDQ0 301 aa10.75□□□□□ -0.69
SS18-202ENST00000269138 RTL8AQ9BWD3 113 aa10.75□□□□□ -0.69
SS18-202ENST00000269138 NARFLQ9H6Q4 476 aa10.75□□□□□ -0.69
SS18-202ENST00000269138 TRIM36Q9NQ86 728 aa10.75□□□□□ -0.69
SS18-202ENST00000269138 C14orf119Q9NWQ9 140 aa10.75□□□□□ -0.69
SS18-202ENST00000269138 LRP5LA4QPB2 252 aa10.74□□□□□ -0.69
SS18-202ENST00000269138 A6NLC8 198 aa10.74□□□□□ -0.69
SS18-202ENST00000269138 CLDN25C9JDP6 229 aa10.74□□□□□ -0.69
SS18-202ENST00000269138 C3orf80F5H4A9 247 aa10.74□□□□□ -0.69
SS18-202ENST00000269138 TMEM178BH3BS89 294 aa10.74□□□□□ -0.69
SS18-202ENST00000269138 GPM6AP51674 278 aa10.74□□□□□ -0.69
SS18-202ENST00000269138 ZNF154Q13106 437 aa10.74□□□□□ -0.69
SS18-202ENST00000269138 UBE2V2Q15819 145 aa10.74□□□□□ -0.69
SS18-202ENST00000269138 CEACAM21Q3KPI0 293 aa10.74□□□□□ -0.69
SS18-202ENST00000269138 KCTD8Q6ZWB6 473 aa10.74□□□□□ -0.69
SS18-202ENST00000269138 CCDC54Q8NEL0 328 aa10.74□□□□□ -0.69
SS18-202ENST00000269138 OR13C3Q8NGS6 347 aa10.74□□□□□ -0.69
SS18-202ENST00000269138 OR13C5Q8NGS8 318 aa10.74□□□□□ -0.69
SS18-202ENST00000269138 GHSRQ92847 366 aa10.74□□□□□ -0.69
SS18-202ENST00000269138 RPL3LQ92901 407 aaKnown RBP10.74□□□□□ -0.69
SS18-202ENST00000269138 COX4I2Q96KJ9 171 aa10.74□□□□□ -0.69
SS18-202ENST00000269138 HIST1H2AAQ96QV6 131 aa10.74□□□□□ -0.69
SS18-202ENST00000269138 MND1Q9BWT6 205 aa10.74□□□□□ -0.69
SS18-202ENST00000269138 COMMD4Q9H0A8 199 aa10.74□□□□□ -0.69
SS18-202ENST00000269138 METTL17Q9H7H0 456 aaPredicted RBP10.74□□□□□ -0.69
SS18-202ENST00000269138 FN3KRPQ9HA64 309 aa10.74□□□□□ -0.69
SS18-202ENST00000269138 PLEKHA1Q9HB21 404 aa10.74□□□□□ -0.69
SS18-202ENST00000269138 C1orf123Q9NWV4 160 aa10.74□□□□□ -0.69
SS18-202ENST00000269138 BLOC1S6Q9UL45 172 aa10.74□□□□□ -0.69
SS18-202ENST00000269138 WIPI2Q9Y4P8 454 aa10.74□□□□□ -0.69
SS18-202ENST00000269138 LRRC42Q9Y546 428 aa10.74□□□□□ -0.69
SS18-202ENST00000269138 ACANP16112 2415 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms